Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s2598_g09407
Locus habu1_scaffold2598 : 2796454 ... 2808313 : +
To GenomeBrowser habu1_scaffold2598:2796454..2808313
Genes list of scaffold habu1_scaffold2598

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s2598_g09407.t1 gi|327280011|ref|XP_003224748.1| PREDICTED: uncharacterized protein LOC100554699 [Anolis carolinensis] 0.0
habu1_s2598_g09407.t1 gi|530578495|ref|XP_005283176.1| PREDICTED: WD repeat-containing protein on Y chromosome-like [Chrysemys picta bellii] 1.0e-36
habu1_s2598_g09407.t1 gi|557263842|ref|XP_006017404.1| PREDICTED: uncharacterized protein LOC102375032 [Alligator sinensis] 8.0e-36
habu1_s2598_g09407.t1 gi|511849572|ref|XP_004749137.1| PREDICTED: uncharacterized protein LOC101672099 isoform X1 [Mustela putorius furo] 4.0e-21
habu1_s2598_g09407.t1 gi|744552649|ref|XP_010974289.1| PREDICTED: uncharacterized protein LOC105085721 [Camelus dromedarius] 2.0e-20

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.1
Venom grand-1 0.0
Pit, infrared sensing 0.0
Nose 0.0
Brain-1 0.0
Eye 0.0
fetal fibroblast 0.0
venom gland-2 0.0
Brain-2 0.0
Spleen 0.0
Lung 0.1
Liver 0.0
Kidney 0.0
Pancreas 0.0
Small intestine 0.0
Large intestine 0.0
Stomach 0.0
heart 0.0
ovary 0.0
cheek muscle 0.1

Transcript
Transcript IDhabu1_s2598_g09407.t1
Definition-
>habu1_s2598_g09407.t1
ggagcaggccgaccaccagctggcccagcccaagggaggcccagaatggacttccagaagcggcatccacacagagaacc
gattgctcacatatttgaatcccaccactggttgtgtccttcagttactggcacttggaagctacttgctaaacagaata
caacttttatcacctttccatatgtgtttaatttccacacacagagtattttcaaacacgatctggaagaagggttcctg
aaacgaataacaagacgaaaagtccgccggcatgtctttggagaaattaacaccaagaaagtttatcagtttggaacagc
ttgtacaccttttcatgcgctgactaccactgaaatggaaactctaaccttccccagcaatctgcccatgacaccacgga
tgatgaacaggggcatagtttgcaccaatgagtcagagctgaaaacgattcagctgactttcccagaactggatgaagaa
tctgcaaaaaagtcttaccccggtgatagaaagaaaccatttggtgcaaccaaaaagtccaccttgcctccgttagttaa
gatgtcaagatcccggttctctgaaaataagaagatctccggttgccatcttccgagggtccccactgtccctgcatcaa
tatcgctcaagtggggaaaattctaaaaattgttaaaaagctcaattaatttaacccaaataggtctggttttgggatgg
tccaggaacatttagacattctggagctgagaactgcacagatgtgtcagtgatccagagaagaatgctgctgctctaca
ttgaatcaccagtgcaaaaccttctcaataattgaaacaactgctatggtctctctggtgggtcaagcaaaagccaattt
aatcacttgcatgtaccatcagaataaagccagatgttttattaggaatg

Protein
Protein IDhabu1_s2598_g09407.t1
Definition-
>habu1_s2598_g09407.t1
MDFQKRHPHREPIAHIFESHHWLCPSVTGTWKLLAKQNTTFITFPYVFNFHTQSIFKHDLEEGFLKRITRRKVRRHVFGE
INTKKVYQFGTACTPFHALTTTEMETLTFPSNLPMTPRMMNRGIVCTNESELKTIQLTFPELDEESAKKSYPGDRKKPFG
ATKKSTLPPLVKMSRSRFSENKKISGCHLPRVPTVPASISLKWGKF

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