Gene
| Gene Model ID | habu1_s2598_g09408 |
|---|---|
| Locus | habu1_scaffold2598 : 2867124 ... 2912582 : + |
| To GenomeBrowser | habu1_scaffold2598:2867124..2912582 |
| Genes list of scaffold | habu1_scaffold2598 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein fam20a | GO:0005794 GO:0044691 GO:0055074 GO:0070062 GO:0070166 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2598_g09408.t1 | 1 | 1 | DUF1193 | 145 | 359 | 0.0 | 329.5 | 0.0 | 0.0 | 329.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2598_g09408.t1 | gi|602629566|ref|XP_007421709.1| | PREDICTED: protein FAM20A [Python bivittatus] | 0.0 |
| habu1_s2598_g09408.t1 | gi|327280023|ref|XP_003224754.1| | PREDICTED: protein FAM20A [Anolis carolinensis] | 0.0 |
| habu1_s2598_g09408.t1 | gi|699633911|ref|XP_009893099.1| | PREDICTED: protein FAM20A [Charadrius vociferus] | 0.0 |
| habu1_s2598_g09408.t1 | gi|527255897|ref|XP_005146227.1| | PREDICTED: protein FAM20A, partial [Melopsittacus undulatus] | 0.0 |
| habu1_s2598_g09408.t1 | gi|694848285|ref|XP_009465267.1| | PREDICTED: protein FAM20A [Nipponia nippon] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 14.5 |
| Venom grand-1 | 0.1 |
| Pit, infrared sensing | 5.3 |
| Nose | 2.2 |
| Brain-1 | 0.8 |
| Eye | 1.7 |
| fetal fibroblast | 7.4 |
| venom gland-2 | 0.1 |
| Brain-2 | 0.6 |
| Spleen | 1.1 |
| Lung | 1.1 |
| Liver | 3.3 |
| Kidney | 3.9 |
| Pancreas | 0.4 |
| Small intestine | 0.1 |
| Large intestine | 0.4 |
| Stomach | 0.3 |
| heart | 0.2 |
| ovary | 0.7 |
| cheek muscle | 0.6 |
Transcript
| Transcript ID | habu1_s2598_g09408.t1 |
|---|---|
| Definition | - |
>habu1_s2598_g09408.t1 tgagccaaaagttactgttactaagcgaaacagttattaagtgagttttgtcccagctgtaaagtgaatcactgagttat taagttagtaacccggttgtgaagtgaatctggcttccccattgatttcacttgatagaaggtcgcaaaaagtgatcaca catgaccccagtgtaaccgtcataaatacatgccagttgccaagcatttgaatttttatcacgtagccatggggatgctg caacggtcaagacaccaggtttatagagaagaacgcaacctaaccgtgggttcagtggttcaactccgacacgaagcaag ctggctccagttccacctggggatcaatcgtcatgccttgtatccacgggccagccctatggttgatcaactccttaggg acacacagaagtttagtactatcagtgctgatatcaaacagaatggaagaagaattatttacctccttcccttcatttcc cagagctatacagttgtaaagcccagtggggtgcacctgaaacttgttttgcggttccaagacttcgggaaagccatgtt caaaccaatgagacagaaccgagacgaggagactccagaagattttttttactttgttgactttcagagacacaatgcag agatcgctgccttccacttagacagcaatgtctgcttctttgcgaagtgcccttacatgtgcaaaacagaatacgccgtc tgtgggaaccctcacctgttggaaggttccctctcggttttcctgccttctctcaacttggcaccacgaatctccatccc taatccgtggatccgatcttatagctttgcaggaaaagaggagtgggaagtaaatcctctctactgcaataccatgaagg agatttatccttacagcagtggcagtcggctactcaatatcattgacatggccatatttgacttcttaataggtaacatg gaccgccatcattatgagatgtttacaaagtttggagatgagggttttttgcttcatttggataatgccagaggatttgg gaaacattcccacgatgagatctccatcttggctccacttaaacagtgttgcataataaagaagaccaccttgttacggc tgcagcttttagccaagtcagactacaaactcagtgatatcatgagggagtccctccttcaagaccgtcttgcccccgtg ttgaccgaagcccaccttttggcattggacaggaggttacagattatcctgaaaactgtggagaaatgcatagaggcctt tggagaagacattgttgtaactgacacaaagcctttggaacccatggcttttgacagaatgacacagccaagctagtacg atcaagggaaaaaaactagaacctgaacttgaaatgatcgattgtgcttccttaatctggacatttaagacttgggagga agccagtctcagcaggatcaggaaaccactgggtggttgaaacctgcagctttggcctcagatttatagatgggaatcac atacacatcacctacaatcttcctgcctcttctccaagagattgaagatacagtcttctgtaactacaaactatgtcctt ctcaggatttggctgggctcatcatggttggatttgattggtggattgaataaaggggaaagacactaaaaaacat |
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Protein
| Protein ID | habu1_s2598_g09408.t1 |
|---|---|
| Definition | - |
>habu1_s2598_g09408.t1 MGMLQRSRHQVYREERNLTVGSVVQLRHEASWLQFHLGINRHALYPRASPMVDQLLRDTQKFSTISADIKQNGRRIIYLL PFISQSYTVVKPSGVHLKLVLRFQDFGKAMFKPMRQNRDEETPEDFFYFVDFQRHNAEIAAFHLDSNVCFFAKCPYMCKT EYAVCGNPHLLEGSLSVFLPSLNLAPRISIPNPWIRSYSFAGKEEWEVNPLYCNTMKEIYPYSSGSRLLNIIDMAIFDFL IGNMDRHHYEMFTKFGDEGFLLHLDNARGFGKHSHDEISILAPLKQCCIIKKTTLLRLQLLAKSDYKLSDIMRESLLQDR LAPVLTEAHLLALDRRLQIILKTVEKCIEAFGEDIVVTDTKPLEPMAFDRMTQPS |
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