Gene
| Gene Model ID | habu1_s2598_g09413 |
|---|---|
| Locus | habu1_scaffold2598 : 3106947 ... 3120703 : - |
| To GenomeBrowser | habu1_scaffold2598:3106947..3120703 |
| Genes list of scaffold | habu1_scaffold2598 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| archaemetzincin-2 isoform x1 | GO:0006508 GO:0008237 GO:0008270 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2598_g09413.t2 | 1 | 1 | Peptidase_M54 | 191 | 297 | 2.0e-16 | 60.3 | 1.1e-18 | 1.4e-15 | 57.5 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.8 |
| Venom grand-1 | 1.5 |
| Pit, infrared sensing | 2.6 |
| Nose | 3.2 |
| Brain-1 | 2.2 |
| Eye | 2.1 |
| fetal fibroblast | 2.1 |
| venom gland-2 | 1.9 |
| Brain-2 | 3.6 |
| Spleen | 3.4 |
| Lung | 3.2 |
| Liver | 3.9 |
| Kidney | 4.3 |
| Pancreas | 3.6 |
| Small intestine | 4.6 |
| Large intestine | 5.4 |
| Stomach | 5.0 |
| heart | 4.6 |
| ovary | 21.9 |
| cheek muscle | 8.0 |
Transcript
| Transcript ID | habu1_s2598_g09413.t1 |
|---|---|
| Definition | - |
>habu1_s2598_g09413.t1 atcaacagtgacagcaataacagcagccccgtgcagtgagaggggcgcatgcactttgggcggcgtcaacgggggcgagg gagcggctgcttcctggaagatggggactagagtcagctgcagcaggcaggggatagcctgatttgggcgccatttcaga ataaagttggctctctcttccgggttgtgagcttacgttgaagatcaaattatccccgtcggaatgaaggtaattaagca ttctgaggagacattgaaaacagctctgatctccaaggacagacaacttttgaagctttatgagaagtttgatcccaagg agaagcatttgctgaatgaagcatttcaaccaggcagtgctctttttaagcctataactctgcattctgaatcagactgg atctcttcacatccagaacccacccaggatttttcacagttttatcatgacccctgcagaaatttgccaaccccacagaa gagaaagatttacatccagcccattggttcttttggagatgccaaagttagcacagatgtctacttgaaatggctgagag attactgtgaagcattttactacagcctgactgtaaggatcctagacccaatgcctgtttcacacacaggttgtgctttt cgaatcaatgaatacacacaaaatctgcaaattcatgcagggtatctcttgaattacctaaagaaaaaaaagccaaagga tgctttttgcattgtgggaataaccatgatagatctttacccgaaggactcttggaattttgtctttggacaagcctcct taacagaaggggtggggatcttcagctttgccagatatgacagtgacttctacagtgcaaactacaagggcagattgaaa acaacgaaaaagcttcctgcagctgactattctgtgtttgatggttactatacacctgagatcactagtaaactgcttct gagatcctgcaaaactttgactcacgagattggacacatctttgggcttcatcactgtcagtggttacaatgtgttatgc aaggatctaatcatctggaggaatcagacagacgtcctttagacctttgtcctatttgcttgcgcaagctgcagtctgta cttgggttcagcattctggaaagatacaaggccctgcagagatggatagaggatagagctaatggaacagaagaagggca cagcagtgaagctagaggaggattgccaaagccggtggaatcatttacagaaagttatgaattgcttatgaaatgcttag acatcctccagaaataggtagaattggatttcctactgtgtataattttcaaggttaatttcagttggacgggcactgac ttcttccaggatgctttctgatttccagaaattatatttgatcagagagcacctttaattttgaaagcatacaggaataa tttcttcccatacaagaattttttgcaggaatattaacttctgctgagaatgccatctgacagacataaggcatattgat catgttacccagattataaatattaactaatatttattgaatatgtatataggagaaaaaaagatcaaataaagttcttc caatgtacttgagat |
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| Transcript ID | habu1_s2598_g09413.t2 |
| Definition | - |
>habu1_s2598_g09413.t2 atcaacagtgacagcaataacagcagccccgtgcagtgagaggggcgcatgcactttgggcggcgtcaacgggggcgagg gagcggctgcttcctggaagatggggactagagtcagctgcagcaggcaggggatagcctgatttgggcgccatttcaga ataaagttggctctctcttccgggttgtgagcttacgttgaagatcaaattatccccgtcggagtatgttgtttctatat ttcactacagaaattgaccaatatatatacgtaacatggagatttaagacagacatgaaggtaattaagcattctgagga gacattgaaaacagctctgatctccaaggacagacaacttttgaagctttatgagaagtttgatcccaaggagaagcatt tgctgaatgaagcatttcaaccaggcagtgctctttttaagcctataactctgcattctgaatcagactggatctcttca catccagaacccacccaggatttttcacagttttatcatgacccctgcagaaatttgccaaccccacagaagagaaagat ttacatccagcccattggttcttttggagatgccaaagttagcacagatgtctacttgaaatggctgagagattactgtg aagcattttactacagcctgactgtaaggatcctagacccaatgcctgtttcacacacaggttgtgcttttcgaatcaat gaatacacacaaaatctgcaaattcatgcagggtatctcttgaattacctaaagaaaaaaaagccaaaggatgctttttg cattgtgggaataaccatgatagatctttacccgaaggactcttggaattttgtctttggacaagcctccttaacagaag gggtggggatcttcagctttgccagatatgacagtgacttctacagtgcaaactacaagggcagattgaaaacaacgaaa aagcttcctgcagctgactattctgtgtttgatggttactatacacctgagatcactagtaaactgcttctgagatcctg caaaactttgactcacgagattggacacatctttgggcttcatcactgtcagtggttacaatgtgttatgcaaggatcta atcatctggaggaatcagacagacgtcctttagacctttgtcctatttgcttgcgcaagctgcagtctgtacttgggttc agcattctggaaagatacaaggccctgcagagatggatagaggatagagctaatggaacagaagaagggcacagcagtga agctagaggaggattgccaaagccggtggaatcatttacagaaagttatgaattgcttatgaaatgcttagacatcctcc agaaataggtagaattggatttcctactgtgtataattttcaaggttaatttcagttggacgggcactgacttcttccag gatgctttctgatttccagaaattatatttgatcagagagcacctttaattttgaaagcatacaggaataatttcttccc atacaagaattttttgcaggaatattaacttctgctgagaatgccatctgacagacataaggcatattgatcatgttacc cagattataaatattaactaatatttattgaatatgtatataggagaaaaaaagatcaaataaagttcttccaatgtact tgagat |
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Protein
| Protein ID | habu1_s2598_g09413.t1 |
|---|---|
| Definition | - |
>habu1_s2598_g09413.t1 MKVIKHSEETLKTALISKDRQLLKLYEKFDPKEKHLLNEAFQPGSALFKPITLHSESDWISSHPEPTQDFSQFYHDPCRN LPTPQKRKIYIQPIGSFGDAKVSTDVYLKWLRDYCEAFYYSLTVRILDPMPVSHTGCAFRINEYTQNLQIHAGYLLNYLK KKKPKDAFCIVGITMIDLYPKDSWNFVFGQASLTEGVGIFSFARYDSDFYSANYKGRLKTTKKLPAADYSVFDGYYTPEI TSKLLLRSCKTLTHEIGHIFGLHHCQWLQCVMQGSNHLEESDRRPLDLCPICLRKLQSVLGFSILERYKALQRWIEDRAN GTEEGHSSEARGGLPKPVESFTESYELLMKCLDILQK |
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| Protein ID | habu1_s2598_g09413.t2 |
| Definition | - |
>habu1_s2598_g09413.t2 MKVIKHSEETLKTALISKDRQLLKLYEKFDPKEKHLLNEAFQPGSALFKPITLHSESDWISSHPEPTQDFSQFYHDPCRN LPTPQKRKIYIQPIGSFGDAKVSTDVYLKWLRDYCEAFYYSLTVRILDPMPVSHTGCAFRINEYTQNLQIHAGYLLNYLK KKKPKDAFCIVGITMIDLYPKDSWNFVFGQASLTEGVGIFSFARYDSDFYSANYKGRLKTTKKLPAADYSVFDGYYTPEI TSKLLLRSCKTLTHEIGHIFGLHHCQWLQCVMQGSNHLEESDRRPLDLCPICLRKLQSVLGFSILERYKALQRWIEDRAN GTEEGHSSEARGGLPKPVESFTESYELLMKCLDILQK |
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