Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s2598_g09415
Locus habu1_scaffold2598 : 3157954 ... 3220041 : +
To GenomeBrowser habu1_scaffold2598:3157954..3220041
Genes list of scaffold habu1_scaffold2598

Annotation by Blast2GO
Annotation GO
regulator of g-protein signaling 9 GO:0004871 GO:0005834 GO:0035556 GO:0038032

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s2598_g09415.t3 1 1 DEP 64 123 1.1e-09 37.8 8.1e-13 4.0e-09 36.0
habu1_s2598_g09415.t3 1 1 G-gamma 244 302 3.1e-09 36.4 1.8e-12 8.7e-09 35.0
habu1_s2598_g09415.t3 1 1 RGS 322 436 4.7e-33 113.8 2.2e-36 1.1e-32 112.5

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.2
Venom grand-1 0.0
Pit, infrared sensing 0.1
Nose 0.7
Brain-1 1.3
Eye 4.9
fetal fibroblast 0.1
venom gland-2 0.1
Brain-2 2.0
Spleen 0.5
Lung 0.2
Liver 0.3
Kidney 0.9
Pancreas 1.6
Small intestine 0.1
Large intestine 0.1
Stomach 0.1
heart 0.1
ovary 0.6
cheek muscle 0.0

Transcript
Transcript IDhabu1_s2598_g09415.t1
Definition-
>habu1_s2598_g09415.t1
aagaatgcccaatcaaagactcattctgcttacacgtggtacctgcttcttgtcttctaagttggctggccccgcccctg
ggtctagcacgtgatcctatcatctggtctgtgtattcggaatttccccttcttcggatttgtcacgtgacggttttttg
gggactgatttattaaaaaaaaatggctcgaactttttgttggggtgcatcggatgttttgccctatcgagctgttgcct
cattatgatcctcgactgatctcgcgtttatatttgcccctgttaggatgcatatccagaatttatgacatattagctaa
cgaggtgtacctttctccccacttcagtataaagtaacattccaaaacatttgaacaaccatcatcctaatcaggtgcag
caatgtcaaccaacacgcatcaaatggcctgtagatcacgatgaccatcacgcagatagatcaaggacagcggtacaggc
cgagaatggcattcttgaaaaagttggaggttttgttggtagaaatgcaagatccacaatctggcatcaaaacacaaata
cagaacctgccggacagcagcattccacatgctgtggttggtagtgatatactgcagtggattatgaagcgtttggagat
taccaatgaagaggggctacatttgggaagtatgatcatcaagtgtgggtacatctatcctcttcaagaccgagggaatt
tgaatctcagaggggacaccagtctctatagattccagacaccctacttttggccaacccagcagtggggagcagaagat
acggattatgccatttacctagcaaagagaaatattaagaagaaaggagcactagaagattatgaaaaggaacattatag
catgttgaacaaacgcatcaatcataaatgggacttcattattatgcaagccaaggaacagtacagcgcaggaaaggaac
gaacgaaaaaagaccggtatactttggattaccaagagaaagcctactggctggtgcaacggactcctcctggaatgcaa
gatacacttgagtatggattggaccgagcgacagatccttgtgaaaataaggtaaaccagaaaaaaacaattgatgtata
taggacagagatcatgtatctccaactggccctcatgaagactgcaacaaagtcatctgtctctctgggaggaatagtga
agtactgtgaacagttctgctccaatgaccctataatctcaggatgcctgcccagcaacccttgggtttctgatgatgtg
gatttttgggaactcaatgcaaaactggtagaaatccccaccaaggcacgagtggagaaatgggccttaaactttagtga
gctgatgaaggaccccaaaggacgtcagagtttccagctgttcctgaagaaggaatttagtggggagaatctgggatttt
gggaagcttgtgaagatttgaagtatggagatcaatccaaagcgaaagaaaaagcagaagaaatttacaaaaccttcttg
gctccaggagcaagacggtggattaatatcgatagcaccactatgggcattacagtcagaggcctcaaaaaccctcaacg
ttatgtcttagatgctgcacagactcatatttacatgctcatgaaaaaggattcttatggtcgctatttaaagtctccgg
tatacaaagaaatgttgtccaaggcaattgtaccacaagaagcagttaaaaaaagctcttacaatccgtttgtccgcaag
cacctgcgctccagtcccagccccatcctcttgaggcagctggaggaagaagccaaagctagagaagccgccaccaacgt
ggacatcacccagttatgtcagtttaccgttcctgtttcgcatttggccatttatactggtacctctgatcctctgcctc
cttctcaatgccccaagcaactccctctgccaaacagtgccagctactcctcacctcttcgggtagacttagacaatacg
tctgtcacagagaagaacttagagcctaacaggtttggttctgacccctttccttccctcctggaaagggatcagaactc
catggattctgaactggacaatggccacagttctccaaatgctatcaactccaagtccaaggtgccacccaagccaaaga
tggccttgtccctaggcaggttcttgaaatggcgatgcttgaattcaccagtgtttgccaccctttcacctaagcatcct
gccagggcacagggaaaagtgcaacccttagaagatctgagccaacaccttcaaccaaaatccaaaaaagcatccaccac
cttctttcagatttctctggagagcaaaatccacccaatggacgctggaggggaagacgatcaccatccctggccttaca
aggattctgccaaagagaaggtcaagtagatgataggagttgacaagacctaataccaaaatatgccacaaaatagtaaa
ataaaataaaaataatagcaattgact
Transcript IDhabu1_s2598_g09415.t2
Definition-
>habu1_s2598_g09415.t2
aagaatgcccaatcaaagactcattctgcttacacgtggtacctgcttcttgtcttctaagttggctggccccgcccctg
ggtctagcacgtgatcctatcatctggtctgtgtattcggaatttccccttcttcggatttgtcacgtgacggttttttg
gggactgatttattaaaaaaaaatggctcgaactttttgttggggtgcatcggatgttttgccctatcgagctgttgcct
cattatgatcctcgactgatctcgcgtttatatttgcccctgttaggatgcatatccagaatttatgacatattagctaa
cgaggtgtacctttctccccacttcagtataaagtaacattccaaaacatttgaacaaccatcatcctaatcaggtgcag
caatgtcaaccaacacgcatcaaatggcctgttggaggttttgttggtagaaatgcaagatccacaatctggcatcaaaa
cacaaatacagaacctgccggacagcagcattccacatgctgtggttggtagtgatatactgcagtggattatgaagcgt
ttggagattaccaatgaagaggggctacatttgggaagtatgatcatcaagtgtgggtacatctatcctcttcaagaccg
agggaatttgaatctcagaggggacaccagtctctatagattccagacaccctacttttggccaacccagcagtggggag
cagaagatacggattatgccatttacctagcaaagagaaatattaagaagaaaggagcactagaagattatgaaaaggaa
cattatagcatgttgaacaaacgcatcaatcataaatgggacttcattattatgcaagccaaggaacagtacagcgcagg
aaaggaacgaacgaaaaaagaccggtatactttggattaccaagagaaagcctactggctggtgcaacggactcctcctg
gaatgcaagatacacttgagtatggattggaccgagcgacagatccttgtgaaaataaggtaaaccagaaaaaaacaatt
gatgtatataggacagagatcatgtatctccaactggccctcatgaagactgcaacaaagtcatctgtctctctgggagg
aatagtgaagtactgtgaacagttctgctccaatgaccctataatctcaggatgcctgcccagcaacccttgggtttctg
atgatgtggatttttgggaactcaatgcaaaactggtagaaatccccaccaaggcacgagtggagaaatgggccttaaac
tttagtgagctgatgaaggaccccaaaggacgtcagagtttccagctgttcctgaagaaggaatttagtggggagaatct
gggattttgggaagcttgtgaagatttgaagtatggagatcaatccaaagcgaaagaaaaagcagaagaaatttacaaaa
ccttcttggctccaggagcaagacggtggattaatatcgatagcaccactatgggcattacagtcagaggcctcaaaaac
cctcaacgttatgtcttagatgctgcacagactcatatttacatgctcatgaaaaaggattcttatggtcgctatttaaa
gtctccggtatacaaagaaatgttgtccaaggcaattgtaccacaagaagcagttaaaaaaagctcttacaatccgtttg
tccgcaagcacctgcgctccagtcccagccccatcctcttgaggcagctggaggaagaagccaaagctagagaagccgcc
accaacgtggacatcacccagttatgtcagtttaccgttcctgtttcgcatttggccatttatactggtacctctgatcc
tctgcctccttctcaatgccccaagcaactccctctgccaaacagtgccagctactcctcacctcttcgggtagacttag
acaatacgtctgtcacagagaagaacttagagcctaacaggtttggttctgacccctttccttccctcctggaaagggat
cagaactccatggattctgaactggacaatggccacagttctccaaatgctatcaactccaagtccaaggtgccacccaa
gccaaagatggccttgtccctaggcaggttcttgaaatggcgatgcttgaattcaccagtgtttgccaccctttcaccta
agcatcctgccagggcacagggaaaagtgcaacccttagaagatctgagccaacaccttcaaccaaaatccaaaaaagca
tccaccaccttctttcagatttctctggagagcaaaatccacccaatggacgctggaggggaagacgatcaccatccctg
gccttacaaggattctgccaaagagaaggtcaagtagatgataggagttgacaagacctaataccaaaatatgccacaaa
atagtaaaataaaataaaaataatagcaattgact
Transcript IDhabu1_s2598_g09415.t3
Definition-
>habu1_s2598_g09415.t3
aagaatgcccaatcaaagactcattctgcttacacgtggtacctgcttcttgtcttctaagttggctggccccgcccctg
ggtctagcacgtgatcctatcatctggtctgtgtattcggaatttccccttcttcggatttgtcacgtgacggttttttg
gggactgatttattaaaaaaaaatggctcgaactttttgttggggtgcatcggatgttttgccctatcgagctgttgcct
cattatgatcctcgactgatctcgcgtttatatttgcccctgttaggatgcatatccagaatttatgacatattagctaa
cgaggtgtacctttctccccacttcagtataaagtaacattccaaaacatttgaacaaccatcatcctaatcaggtgcag
caatgtcaaccaacacgcatcaaatggcctgtagatcacgatgaccatcacgcagatagatcaaggacagcggtacaggc
cgagaatggcattcttgaaaaagtgcagaaaagagcatttttaccatgacatctaccaccgctgctttgatgaagaggct
gaatactccttttattacctgcggtttgcccagcttttaaggttggaggttttgttggtagaaatgcaagatccacaatc
tggcatcaaaacacaaatacagaacctgccggacagcagcattccacatgctgtggttggtagtgatatactgcagtgga
ttatgaagcgtttggagattaccaatgaagaggggctacatttgggaagtatgatcatcaagtgtgggtacatctatcct
cttcaagaccgagggaatttgaatctcagaggggacaccagtctctatagattccagacaccctacttttggccaaccca
gcagtggggagcagaagatacggattatgccatttacctagcaaagagaaatattaagaagaaaggagcactagaagatt
atgaaaaggaacattatagcatgttgaacaaacgcatcaatcataaatgggacttcattattatgcaagccaaggaacag
tacagcgcaggaaaggaacgaacgaaaaaagaccggtatactttggattaccaagagaaagcctactggctggtgcaacg
gactcctcctggaatgcaagatacacttgagtatggattggaccgagcgacagatccttgtgaaaataaggtaaaccaga
aaaaaacaattgatgtatataggacagagatcatgtatctccaactggccctcatgaagactgcaacaaagtcatctgtc
tctctgggaggaatagtgaagtactgtgaacagttctgctccaatgaccctataatctcaggatgcctgcccagcaaccc
ttgggtttctgatgatgtggatttttgggaactcaatgcaaaactggtagaaatccccaccaaggcacgagtggagaaat
gggccttaaactttagtgagctgatgaaggaccccaaaggacgtcagagtttccagctgttcctgaagaaggaatttagt
ggggagaatctgggattttgggaagcttgtgaagatttgaagtatggagatcaatccaaagcgaaagaaaaagcagaaga
aatttacaaaaccttcttggctccaggagcaagacggtggattaatatcgatagcaccactatgggcattacagtcagag
gcctcaaaaaccctcaacgttatgtcttagatgctgcacagactcatatttacatgctcatgaaaaaggattcttatggt
cgctatttaaagtctccggtatacaaagaaatgttgtccaaggcaattgtaccacaagaagcagttaaaaaaagctctta
caatccgtttgtccgcaagcacctgcgctccagtcccagccccatcctcttgaggcagctggaggaagaagccaaagcta
gagaagccgccaccaacgtggacatcacccagttatgtcagtttaccgttcctgtttcgcatttggccatttatactggt
acctctgatcctctgcctccttctcaatgccccaagcaactccctctgccaaacagtgccagctactcctcacctcttcg
ggtagacttagacaatacgtctgtcacagagaagaacttagagcctaacaggtttggttctgacccctttccttccctcc
tggaaagggatcagaactccatggattctgaactggacaatggccacagttctccaaatgctatcaactccaagtccaag
gtgccacccaagccaaagatggccttgtccctaggcaggttcttgaaatggcgatgcttgaattcaccagtgtttgccac
cctttcacctaagcatcctgccagggcacagggaaaagtgcaacccttagaagatctgagccaacaccttcaaccaaaat
ccaaaaaagcatccaccaccttctttcagatttctctggagagcaaaatccacccaatggacgctggaggggaagacgat
caccatccctggccttacaaggattctgccaaagagaaggtcaagtagatgataggagttgacaagacctaataccaaaa
tatgccacaaaatagtaaaataaaataaaaataatagcaattgact

Protein
Protein IDhabu1_s2598_g09415.t1
Definition-
>habu1_s2598_g09415.t1
MAFLKKLEVLLVEMQDPQSGIKTQIQNLPDSSIPHAVVGSDILQWIMKRLEITNEEGLHLGSMIIKCGYIYPLQDRGNLN
LRGDTSLYRFQTPYFWPTQQWGAEDTDYAIYLAKRNIKKKGALEDYEKEHYSMLNKRINHKWDFIIMQAKEQYSAGKERT
KKDRYTLDYQEKAYWLVQRTPPGMQDTLEYGLDRATDPCENKVNQKKTIDVYRTEIMYLQLALMKTATKSSVSLGGIVKY
CEQFCSNDPIISGCLPSNPWVSDDVDFWELNAKLVEIPTKARVEKWALNFSELMKDPKGRQSFQLFLKKEFSGENLGFWE
ACEDLKYGDQSKAKEKAEEIYKTFLAPGARRWINIDSTTMGITVRGLKNPQRYVLDAAQTHIYMLMKKDSYGRYLKSPVY
KEMLSKAIVPQEAVKKSSYNPFVRKHLRSSPSPILLRQLEEEAKAREAATNVDITQLCQFTVPVSHLAIYTGTSDPLPPS
QCPKQLPLPNSASYSSPLRVDLDNTSVTEKNLEPNRFGSDPFPSLLERDQNSMDSELDNGHSSPNAINSKSKVPPKPKMA
LSLGRFLKWRCLNSPVFATLSPKHPARAQGKVQPLEDLSQHLQPKSKKASTTFFQISLESKIHPMDAGGEDDHHPWPYKD
SAKEKVK
Protein IDhabu1_s2598_g09415.t2
Definition-
>habu1_s2598_g09415.t2
MQDPQSGIKTQIQNLPDSSIPHAVVGSDILQWIMKRLEITNEEGLHLGSMIIKCGYIYPLQDRGNLNLRGDTSLYRFQTP
YFWPTQQWGAEDTDYAIYLAKRNIKKKGALEDYEKEHYSMLNKRINHKWDFIIMQAKEQYSAGKERTKKDRYTLDYQEKA
YWLVQRTPPGMQDTLEYGLDRATDPCENKVNQKKTIDVYRTEIMYLQLALMKTATKSSVSLGGIVKYCEQFCSNDPIISG
CLPSNPWVSDDVDFWELNAKLVEIPTKARVEKWALNFSELMKDPKGRQSFQLFLKKEFSGENLGFWEACEDLKYGDQSKA
KEKAEEIYKTFLAPGARRWINIDSTTMGITVRGLKNPQRYVLDAAQTHIYMLMKKDSYGRYLKSPVYKEMLSKAIVPQEA
VKKSSYNPFVRKHLRSSPSPILLRQLEEEAKAREAATNVDITQLCQFTVPVSHLAIYTGTSDPLPPSQCPKQLPLPNSAS
YSSPLRVDLDNTSVTEKNLEPNRFGSDPFPSLLERDQNSMDSELDNGHSSPNAINSKSKVPPKPKMALSLGRFLKWRCLN
SPVFATLSPKHPARAQGKVQPLEDLSQHLQPKSKKASTTFFQISLESKIHPMDAGGEDDHHPWPYKDSAKEKVK
Protein IDhabu1_s2598_g09415.t3
Definition-
>habu1_s2598_g09415.t3
MAFLKKCRKEHFYHDIYHRCFDEEAEYSFYYLRFAQLLRLEVLLVEMQDPQSGIKTQIQNLPDSSIPHAVVGSDILQWIM
KRLEITNEEGLHLGSMIIKCGYIYPLQDRGNLNLRGDTSLYRFQTPYFWPTQQWGAEDTDYAIYLAKRNIKKKGALEDYE
KEHYSMLNKRINHKWDFIIMQAKEQYSAGKERTKKDRYTLDYQEKAYWLVQRTPPGMQDTLEYGLDRATDPCENKVNQKK
TIDVYRTEIMYLQLALMKTATKSSVSLGGIVKYCEQFCSNDPIISGCLPSNPWVSDDVDFWELNAKLVEIPTKARVEKWA
LNFSELMKDPKGRQSFQLFLKKEFSGENLGFWEACEDLKYGDQSKAKEKAEEIYKTFLAPGARRWINIDSTTMGITVRGL
KNPQRYVLDAAQTHIYMLMKKDSYGRYLKSPVYKEMLSKAIVPQEAVKKSSYNPFVRKHLRSSPSPILLRQLEEEAKARE
AATNVDITQLCQFTVPVSHLAIYTGTSDPLPPSQCPKQLPLPNSASYSSPLRVDLDNTSVTEKNLEPNRFGSDPFPSLLE
RDQNSMDSELDNGHSSPNAINSKSKVPPKPKMALSLGRFLKWRCLNSPVFATLSPKHPARAQGKVQPLEDLSQHLQPKSK
KASTTFFQISLESKIHPMDAGGEDDHHPWPYKDSAKEKVK

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