Gene
| Gene Model ID | habu1_s2598_g09418 |
|---|---|
| Locus | habu1_scaffold2598 : 3431143 ... 3477547 : - |
| To GenomeBrowser | habu1_scaffold2598:3431143..3477547 |
| Genes list of scaffold | habu1_scaffold2598 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| axin-2 isoform x1 | GO:0001756 GO:0001934 GO:0001957 GO:0003139 GO:0003413 GO:0005634 GO:0005737 GO:0005813 GO:0008285 GO:0010718 GO:0010942 GO:0030282 GO:0031625 GO:0032423 GO:0035414 GO:0038032 GO:0042476 GO:0043570 GO:0045668 GO:0048255 GO:0061181 GO:0070411 GO:0070602 GO:0090090 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2598_g09418.t1 | 1 | 1 | RGS | 84 | 202 | 5.8e-28 | 97.3 | 3.9e-31 | 1.4e-27 | 96.0 |
| habu1_s2598_g09418.t1 | 1 | 1 | Axin_b-cat_bind | 441 | 477 | 2.2e-18 | 65.6 | 6.0e-22 | 2.2e-18 | 65.6 |
| habu1_s2598_g09418.t1 | 1 | 1 | DIX | 763 | 842 | 3.2e-30 | 103.6 | 1.8e-33 | 6.7e-30 | 102.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2598_g09418.t1 | gi|602629489|ref|XP_007421671.1| | PREDICTED: axin-2 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s2598_g09418.t1 | gi|327280003|ref|XP_003224744.1| | PREDICTED: axin-2 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s2598_g09418.t1 | gi|557263858|ref|XP_006017412.1| | PREDICTED: axin-2 isoform X1 [Alligator sinensis] | 0.0 |
| habu1_s2598_g09418.t1 | gi|557263860|ref|XP_006017413.1| | PREDICTED: axin-2 isoform X2 [Alligator sinensis] | 0.0 |
| habu1_s2598_g09418.t1 | gi|564268546|ref|XP_006273062.1| | PREDICTED: axin-2 [Alligator mississippiensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.8 |
| Venom grand-1 | 1.7 |
| Pit, infrared sensing | 2.5 |
| Nose | 1.7 |
| Brain-1 | 2.0 |
| Eye | 2.4 |
| fetal fibroblast | 1.0 |
| venom gland-2 | 1.9 |
| Brain-2 | 2.8 |
| Spleen | 1.0 |
| Lung | 2.3 |
| Liver | 0.7 |
| Kidney | 1.1 |
| Pancreas | 0.8 |
| Small intestine | 1.9 |
| Large intestine | 2.2 |
| Stomach | 0.9 |
| heart | 1.5 |
| ovary | 5.5 |
| cheek muscle | 1.9 |
Transcript
| Transcript ID | habu1_s2598_g09418.t1 |
|---|---|
| Definition | - |
>habu1_s2598_g09418.t1 nnnnnnnnnnnnnnnnnnnnnnnnnnnnnagagagagagagagagagagagagagagagtgaaatggaaaccagatgctg aggaaagcacgttttgttcttttgccagagaagactctgaggatcccctgctgacttgagaaagaaaagagagagaggca cacagattgctgaggaacttaaaaaggggaaggagaaaaaaaanaaaagctctatcagaaggaactcccaggaaccatga gcagcgctgcattgctgactcacctcccagaccccagcagcagcttcagggaagatgccccacgcccccctgtaccaggg gaagaaggagagacaccatgccatctggctgccagtttctttgccctaaaaaaccaaagcttcaaggccatgtctgtttc ttccacacccaggaggaatgaagatggtcttggggagccagaaggcagtgcatctccagactctcctctcgcccgatgga ccaaatccttgcattctttactaggagatcaagatggtgcttatctctttcggaccttcctggaaagggagaaatgtgtg gatactttagacttttggtttgcctgcaatggcttcaggcagatggaccttaaggatgccaaaactttaagagtcgccaa agctatctacaaaaggtacattgagaataatagcattgtttccaagcaactcaagcctgccacaaagacctacatacggg ataatatcaagaagcagcagatcgattctgtaatgtttgatcaggcacagactgagattcagactgtgatggaggaaaat gcttaccagatgtttttgacttctgatatatacctcgaatatgtaaggactgggggagaaaatcctgcttacattaacag caatggactgggcagcttgaaagtggattgtggctatctccctaccttgaatgaagaagaggaatggagctgcgctgacc ttaaaaacaaacttttgccctccatactgggactgtccagtaagaccttgagggccacagccagtgtccgagctacagaa actgtggaaaatgggtttagatccttcaagaggaatgatccagttcacccttatcatgtgaattctggctacgtctttgc tcctgctactagtgcaaatgacagcgaaatttctagtgatgctctgactgatgattctatgtcaatgaccgacagcagcg ttgatgggatccctccttacagaatcgggagcaagaagcagctccagagggaaatgcatcggagcgtcaaggccaatggg caagtttctctacctcattttccaagaacccaccggctccccaaggaaatgacccctgtggaacccgccaccttcgctgc cgagctcatctctcggttggaaaagctcaagcgagaacaagagaccatggattgcttggaagagaggctgcagcaaatca cagaggatgacgaaaaggagatcactgacacgcctgtcgctgcccagggcaaccgagagcttgtagccctgcaacatcag cagcaacccctcacgctccttcccaccggcagctacgaagatgatcctcaggccattctggacgaccacctgtcccgcgt gcttaagacccccgggtgtcagtctcccggcatggggcggcacagtcctcgtgctcgttcccctgaccgactcccggggg gcaagttcctgttagccaccccaggcaagactgccgtgcccacggcttcttgtgctcttctcggcaaaggatttgtcacc aagcagaccaccaagcatgttcaccatcactacatccaccaccacaccatccccaaaacgaaagagcagatagaagctga ggcagcccagcgggtccaatgcttgtgtcccgggggcagtgattattattgctatccaaaatgtagaggacacacgaagg gggcggatcttcctgtcgctcagctggagccatttggcctcagcagaactgggacccttcccaaaaggaactgtaagctc caggatggcctcgtcctgccaggtggagaaggaggtggtcttcctgccccatcaggcataccgctacccggtggggaagc cgatcgctcccagaacgtctggcagtggatgttggagagtgaaagacaatctaagcacaagccccatagcacgcaaaaca caaagaaggcctacaattctgagtccaccagaggtgcatctggggagcggccaacccgtcatcaccagtggggcaacagc agccacccacgggctgtgcagcctgcccacccctttgtccaggatcctgccatgcctccacttactccacccaacacact ggcccagctggaggaagcttgccgcaggctagctgaggtgtccaagccacagaaacaacggtgttcaacttcaaatcagt tgagagatcgaaaccacttggcttctgtaccaggagggaacggccctttctgcacggcgaacacagcatcagaagatcac aaagaaccaaagaaactccctgttgttcactcctcccagcctagtgagttggttgtcacttattttttctgtggagaaga aattccctacaggaggctgttaaaggccccgagcctgacacttggccactttaaagagcagctgagcaaaaagggaaatt ataggtattacttcaaaaaagcaagtgatgagtttgactgtggggcagtcttcgaagaaatctgggacgatgatgccatt ctgccaatgtacgacggcagaattctcggaaaagttgagaggattgattgactggttctgattgactggttctgactggc atagtctatgtttttttcccattaaatccatttgatggatatgctgctttaaaagatggagaaagggggatgtgatgtaa agaaaaaggggtgtttatattttattttttacattgtttccactgtctaaataaatgtgtcctttactgaaatgtgc |
|
Protein
| Protein ID | habu1_s2598_g09418.t1 |
|---|---|
| Definition | - |
>habu1_s2598_g09418.t1 MSSAALLTHLPDPSSSFREDAPRPPVPGEEGETPCHLAASFFALKNQSFKAMSVSSTPRRNEDGLGEPEGSASPDSPLAR WTKSLHSLLGDQDGAYLFRTFLEREKCVDTLDFWFACNGFRQMDLKDAKTLRVAKAIYKRYIENNSIVSKQLKPATKTYI RDNIKKQQIDSVMFDQAQTEIQTVMEENAYQMFLTSDIYLEYVRTGGENPAYINSNGLGSLKVDCGYLPTLNEEEEWSCA DLKNKLLPSILGLSSKTLRATASVRATETVENGFRSFKRNDPVHPYHVNSGYVFAPATSANDSEISSDALTDDSMSMTDS SVDGIPPYRIGSKKQLQREMHRSVKANGQVSLPHFPRTHRLPKEMTPVEPATFAAELISRLEKLKREQETMDCLEERLQQ ITEDDEKEITDTPVAAQGNRELVALQHQQQPLTLLPTGSYEDDPQAILDDHLSRVLKTPGCQSPGMGRHSPRARSPDRLP GGKFLLATPGKTAVPTASCALLGKGFVTKQTTKHVHHHYIHHHTIPKTKEQIEAEAAQRVQCLCPGGSDYYCYPKCRGHT KGADLPVAQLEPFGLSRTGTLPKRNCKLQDGLVLPGGEGGGLPAPSGIPLPGGEADRSQNVWQWMLESERQSKHKPHSTQ NTKKAYNSESTRGASGERPTRHHQWGNSSHPRAVQPAHPFVQDPAMPPLTPPNTLAQLEEACRRLAEVSKPQKQRCSTSN QLRDRNHLASVPGGNGPFCTANTASEDHKEPKKLPVVHSSQPSELVVTYFFCGEEIPYRRLLKAPSLTLGHFKEQLSKKG NYRYYFKKASDEFDCGAVFEEIWDDDAILPMYDGRILGKVERID |
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