Gene
| Gene Model ID | habu1_s264_g01336 |
|---|---|
| Locus | habu1_scaffold264 : 3584 ... 27775 : - |
| To GenomeBrowser | habu1_scaffold264:3584..27775 |
| Genes list of scaffold | habu1_scaffold264 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cysteine-rich with egf-like domain protein 1 isoform x1 | GO:0005509 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s264_g01336.t1 | 2 | 1 | DUF3456 | 31 | 87 | 2.0e-18 | 66.8 | 4.3e-14 | 1.3e-10 | 41.4 |
| habu1_s264_g01336.t1 | 2 | 2 | DUF3456 | 90 | 130 | 2.0e-18 | 66.8 | 1.0e-09 | 3.0e-06 | 27.3 |
| habu1_s264_g01336.t1 | 2 | 1 | cEGF | 215 | 235 | 1.7e-06 | 27.5 | 6.0e-07 | 0.0018 | 17.8 |
| habu1_s264_g01336.t1 | 2 | 1 | EGF_CA | 232 | 262 | 5.3e-13 | 48.7 | 1.4e-10 | 4.1e-07 | 29.8 |
| habu1_s264_g01336.t1 | 2 | 2 | cEGF | 275 | 295 | 1.7e-06 | 27.5 | 2.5e-07 | 0.00075 | 19.0 |
| habu1_s264_g01336.t1 | 2 | 2 | EGF_CA | 292 | 328 | 5.3e-13 | 48.7 | 1.8e-11 | 5.4e-08 | 32.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s264_g01336.t1 | gi|602637180|ref|XP_007425439.1| | PREDICTED: cysteine-rich with EGF-like domain protein 1 isoform X2 [Python bivittatus] | 0.0 |
| habu1_s264_g01336.t1 | gi|602637178|ref|XP_007425438.1| | PREDICTED: cysteine-rich with EGF-like domain protein 1 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s264_g01336.t1 | gi|637273576|ref|XP_008103777.1| | PREDICTED: cysteine-rich with EGF-like domain protein 1 [Anolis carolinensis] | 0.0 |
| habu1_s264_g01336.t1 | gi|602637182|ref|XP_007425440.1| | PREDICTED: cysteine-rich with EGF-like domain protein 1 isoform X3 [Python bivittatus] | 0.0 |
| habu1_s264_g01336.t1 | gi|530608789|ref|XP_005296048.1| | PREDICTED: cysteine-rich with EGF-like domain protein 1 isoform X1 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.9 |
| Venom grand-1 | 8.2 |
| Pit, infrared sensing | 3.9 |
| Nose | 5.2 |
| Brain-1 | 5.8 |
| Eye | 5.1 |
| fetal fibroblast | 6.1 |
| venom gland-2 | 5.7 |
| Brain-2 | 6.9 |
| Spleen | 5.6 |
| Lung | 7.3 |
| Liver | 9.1 |
| Kidney | 12.4 |
| Pancreas | 8.0 |
| Small intestine | 6.9 |
| Large intestine | 5.3 |
| Stomach | 7.4 |
| heart | 6.9 |
| ovary | 8.1 |
| cheek muscle | 8.5 |
Transcript
| Transcript ID | habu1_s264_g01336.t1 |
|---|---|
| Definition | - |
>habu1_s264_g01336.t1 gcggcggacccgggagtcgcctggtgtgtgcgaaagtgggcgctgcacttcctggcctcccccgttggctcgcgctgctc tcccgaggggcgagcgggggagaggcaagtcttgttcctggcctgaaaatggctttttccaggatgaaggtcccacctgc tctgttctccttcctcttgctattccagtggatgccaaactctggtagttcccagcaagatacctgccagacctgtcggg gtcttgtcgacaatttcaataagggtctggagcggacacagcgagagaacttcgggggcgggaacacagcctgggaagaa gagaagcttgccaaatacgccaacagtgagacacgtctgttggaagtattggaaagtgtgtgttctacatcagattttgc ctgccaccagctgctggagcgaagtgaagaccacgtagaacattggtggtttcacgagcagcagcagcatccagactttt tccaatggctgtgcatggataccctgaaattatgctgcccatctggcacctatggccctgattgccagacctgccctggg ggtgccgagaagccttgcagtggatatgggcagtgtgatggtgaaggcacaagtgggggcactggcctctgcatgtgtca gactggctacggtggtcccttttgttccgagtgtggagatggctactatgaagctgctcgcaatgacagccacctggtat gtgcggagtgctaccgggcctgtgggcgctgttcaggccccgaggataccagctgtctacgctgcaagagaggctggatg ctgcacaaccaacgatgcatcgacatagatgaatgtggcaccgatatggcacactgtcgcagcaaccagttttgtgtcaa tacagaaggctcctatgaatgccgagactgtgccaagccttgtattggctgcatgggtgctgggccttctcgctgcaaga aatgcaacaagggctaccagcgagatggtgtcaaatgccttgatgtggatgaatgtgctggtgaagtggaggaacctgtg tgtacgggcgccaacgaggtttgtgagaacacagatggcagctatcgctgtgtttgcgctgagggacatctacgcaaaga ggggatctgtgtggaagacaaacccccagatgctcccgaaaaaggattctttgacgacattacagatgacgaagtggttg tgctgcagcagatgttcttcggggccatcatctgcgcgctggccaccttggctgccaaaggagacatggtcttcactgcc attttcataggtgccgtggctgcgatggccggctattggatgtcggagcgcagcgaccgcgttctcgatggcttcatgaa agggagatagggcttaggcagggttcactcccttaactgcttcctgcctcagagagccagctgggggggcaggaatacct tgacccccctaccctttcccccttatcttagcaggtttgaaaccaggagatgggaaacacaacctgcatccccatctggc ctaaaacaagccttgactttctgaagatatgctggagggacaaataggagctgggaaatcatgcaggcctatcactgaga ggtcctgacaggtattagaagggactggataccccttaggaagtttgaggttcagaagaaaccacccctattattgtcca actgacccactctccatgcatgttggatgatcctggaagagttcatcccaataagctatgatctctcccacttggggctg tcaaggctaactggagaaaagctcagctctttgaatctgtgctggcatggggtggttccctgctggcttttggggtaacc tgtcctttggccaagagttgacctacacattgcattgaaggaagagagaaatggcagcaatacatcgttagagtgttccg cttcaggtaggatccagtgtttgggctgacctcagaatcaccctgtattgaatcaaccagtgtcacaagagagagcataa tataaatttaataaataataatatatatacacttatttgtgtggtcagaagtggtacatttcaaacttttctcatctgta taataaatgtatgggcttgctctcactct |
|
Protein
| Protein ID | habu1_s264_g01336.t1 |
|---|---|
| Definition | - |
>habu1_s264_g01336.t1 MAFSRMKVPPALFSFLLLFQWMPNSGSSQQDTCQTCRGLVDNFNKGLERTQRENFGGGNTAWEEEKLAKYANSETRLLEV LESVCSTSDFACHQLLERSEDHVEHWWFHEQQQHPDFFQWLCMDTLKLCCPSGTYGPDCQTCPGGAEKPCSGYGQCDGEG TSGGTGLCMCQTGYGGPFCSECGDGYYEAARNDSHLVCAECYRACGRCSGPEDTSCLRCKRGWMLHNQRCIDIDECGTDM AHCRSNQFCVNTEGSYECRDCAKPCIGCMGAGPSRCKKCNKGYQRDGVKCLDVDECAGEVEEPVCTGANEVCENTDGSYR CVCAEGHLRKEGICVEDKPPDAPEKGFFDDITDDEVVVLQQMFFGAIICALATLAAKGDMVFTAIFIGAVAAMAGYWMSE RSDRVLDGFMKGR |
|