Gene
| Gene Model ID | habu1_s264_g01341 |
|---|---|
| Locus | habu1_scaffold264 : 214086 ... 236931 : + |
| To GenomeBrowser | habu1_scaffold264:214086..236931 |
| Genes list of scaffold | habu1_scaffold264 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transcriptional adapter 3 isoform x1 | EC:2.3.1.48 GO:0001932 GO:0004402 GO:0005671 GO:0007067 GO:0007165 GO:0016922 GO:0019904 GO:0030374 GO:0030914 GO:0031063 GO:0031647 GO:0033276 GO:0042967 GO:0043966 GO:0045893 GO:0045941 GO:0072686 GO:0090043 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s264_g01341.t1 | 1 | 1 | Ada3 | 307 | 428 | 5.0e-27 | 94.2 | 7.4e-31 | 5.5e-27 | 94.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s264_g01341.t1 | gi|602637198|ref|XP_007425448.1| | PREDICTED: transcriptional adapter 3 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s264_g01341.t1 | gi|395516560|ref|XP_003762455.1| | 0.0 | |
| habu1_s264_g01341.t1 | gi|637273521|ref|XP_008103764.1| | PREDICTED: transcriptional adapter 3 isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s264_g01341.t1 | gi|637273517|ref|XP_003217931.2| | PREDICTED: transcriptional adapter 3 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s264_g01341.t1 | gi|612042248|ref|XP_001365351.2| | PREDICTED: transcriptional adapter 3 isoform X1 [Monodelphis domestica] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.4 |
| Venom grand-1 | 3.4 |
| Pit, infrared sensing | 4.8 |
| Nose | 3.9 |
| Brain-1 | 4.5 |
| Eye | 4.6 |
| fetal fibroblast | 9.8 |
| venom gland-2 | 5.5 |
| Brain-2 | 4.7 |
| Spleen | 5.6 |
| Lung | 6.4 |
| Liver | 4.2 |
| Kidney | 10.1 |
| Pancreas | 3.7 |
| Small intestine | 7.5 |
| Large intestine | 5.7 |
| Stomach | 4.9 |
| heart | 4.8 |
| ovary | 39.6 |
| cheek muscle | 6.2 |
Transcript
| Transcript ID | habu1_s264_g01341.t1 |
|---|---|
| Definition | - |
>habu1_s264_g01341.t1 attacaagcaatggggtgggcgcagttttgctatgatgcatctggcccgtgggccgacaagtttgacacccctggtttaa acccattcattttataatttgacaagacaacagaggcctttgggtgggggaatagtgctggagagaaaagtttgaaggtt gttgatttttatttgtatcttttgaggcgaggaagggatcaactacttgctactcaagagcttcgctaatgacttacggc ccagcaacaccatgtctgaactgaaagattgtccccttcaattccacgatttcaagtctgtggaccatctcaaagtgtgc ccacgctatacggcggtactggcccgttctgaagatgatggtattggcattgaagagcttgacacgctacagttagagct tgaaacattgctgtcatctgcaagccgccgacttcgggtgctggagactgaaacccagatcttgacagactggcaggaca agaaaggagacagacgatttctgaaaattggcaaggaccatgaggtgggtccttccatcaaacatagcaagctcaagaag cagaagctagatgtcaaaggaagccacagcactccaggacggcccaaatccaagaacctgcagcctaaaattcaagagta tgaattctcagatgatccaattgatgtgccccgtattcctaaaaatgatgcacccaacagattctgggcctcagtggagc catactgcgctgaccttaccaatgaggaggttcgaaccttagacgatcttctcaagccacctgaagatgaagctgaacac tacaagatcccacccttaggaaaacattactcccagcgctgggcccaggaagacttgctggaagagcagaaggatggggc tcgggctgcagctactgcggataagaagaaaggcatcttgggacctctgaccgaactggacactaaagatgttgatgctt tgctgaagaaatcggagtcccagcatgaacagccagaggatggctgcccttttgggcctctcacccagcgccttctgcag gcacttgtagaagagaacatcatctcccccattgaagattcgcctattccggagatagcaggcaaagactctgcaattga tggtgccagcacttcccctcgcagccagaacaagcccttcagcgtaccccacacaaaatctcttgaaggccgcatcaagg aagagctgattgctcaagggctgctggagtcagaggaccgaccgacagaggacttggaggatgaagtgctggccgagctg cggaagaggcaggctgaactcaaggcgttaagcacacacaaccggaccaagaaagtcgagctgctcaggctggccaaaga ggaacttcacaggcaagagctgcggcaacgtgtgcgcattgcggacaacgaagtgatggatgccttccgcaagatcatgg ccgcccgccagaagaagcgcaccccaaccaagaaggaaaaagaccaagcgtggaagagcctcaaggaacgcgagagcatc cttaagctgctagatggttaatgctacaagacgcctggccgagcttctccatttgaaccataacggaggccccagcttaa ggggagatgtcagccgcaggtgtagactatatagcagcatccctcactggtttgtcgtcactcctcttgctgtatattcc agctgagactctgggcaggttggcttccagcagtgtgccttctctttctgggtgtggctttgagccctgtggtgtgcggt gaaatgagcgcccgggattgcttaaagcggcagtccccactgtaaggacaactatgctgtggcatggaggcgagacggaa caaaatctgtattagtcttgggcaccaaatgccaggtttcaggatctgtcagcagcataaactggaacagatggcgggtc gtt |
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Protein
| Protein ID | habu1_s264_g01341.t1 |
|---|---|
| Definition | - |
>habu1_s264_g01341.t1 MSELKDCPLQFHDFKSVDHLKVCPRYTAVLARSEDDGIGIEELDTLQLELETLLSSASRRLRVLETETQILTDWQDKKGD RRFLKIGKDHEVGPSIKHSKLKKQKLDVKGSHSTPGRPKSKNLQPKIQEYEFSDDPIDVPRIPKNDAPNRFWASVEPYCA DLTNEEVRTLDDLLKPPEDEAEHYKIPPLGKHYSQRWAQEDLLEEQKDGARAAATADKKKGILGPLTELDTKDVDALLKK SESQHEQPEDGCPFGPLTQRLLQALVEENIISPIEDSPIPEIAGKDSAIDGASTSPRSQNKPFSVPHTKSLEGRIKEELI AQGLLESEDRPTEDLEDEVLAELRKRQAELKALSTHNRTKKVELLRLAKEELHRQELRQRVRIADNEVMDAFRKIMAARQ KKRTPTKKEKDQAWKSLKERESILKLLDG |
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