Gene
| Gene Model ID | habu1_s264_g01343 |
|---|---|
| Locus | habu1_scaffold264 : 283909 ... 309325 : - |
| To GenomeBrowser | habu1_scaffold264:283909..309325 |
| Genes list of scaffold | habu1_scaffold264 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| n-glycosylase dna lyase | GO:0000737 GO:0003684 GO:0005739 GO:0006284 GO:0006289 GO:0006355 GO:0006979 GO:0008017 GO:0009314 GO:0016363 GO:0016607 GO:0033158 GO:0034039 GO:0045298 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s264_g01343.t1 | 1 | 1 | OGG_N | 56 | 214 | 2.9e-31 | 107.8 | 1.1e-34 | 5.3e-31 | 107.0 |
| habu1_s264_g01343.t1 | 1 | 1 | HhH-GPD | 216 | 356 | 6.8e-16 | 58.4 | 2.2e-19 | 1.1e-15 | 57.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s264_g01343.t1 | gi|602637208|ref|XP_007425453.1| | PREDICTED: N-glycosylase/DNA lyase [Python bivittatus] | 0.0 |
| habu1_s264_g01343.t1 | gi|327266336|ref|XP_003217962.1| | PREDICTED: N-glycosylase/DNA lyase [Anolis carolinensis] | 0.0 |
| habu1_s264_g01343.t1 | gi|641776778|ref|XP_005296090.2| | PREDICTED: LOW QUALITY PROTEIN: N-glycosylase/DNA lyase [Chrysemys picta bellii] | 0.0 |
| habu1_s264_g01343.t1 | gi|729722315|ref|XP_010569678.1| | PREDICTED: N-glycosylase/DNA lyase, partial [Haliaeetus leucocephalus] | 0.0 |
| habu1_s264_g01343.t1 | gi|66911165|gb|AAH97662.1| | LOC733253 protein [Xenopus laevis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.7 |
| Venom grand-1 | 1.8 |
| Pit, infrared sensing | 1.5 |
| Nose | 1.0 |
| Brain-1 | 6.5 |
| Eye | 2.3 |
| fetal fibroblast | 2.2 |
| venom gland-2 | 0.9 |
| Brain-2 | 5.5 |
| Spleen | 0.7 |
| Lung | 1.4 |
| Liver | 2.5 |
| Kidney | 1.1 |
| Pancreas | 1.2 |
| Small intestine | 0.6 |
| Large intestine | 1.1 |
| Stomach | 1.0 |
| heart | 2.9 |
| ovary | 1.4 |
| cheek muscle | 13.3 |
Transcript
| Transcript ID | habu1_s264_g01343.t1 |
|---|---|
| Definition | - |
>habu1_s264_g01343.t1 agttgaggactaaaccggtcataagtcaaggactacccaaccggtcaggccgttctctatggtggttttacggactcgga ggtacgggttttgcgccaaactagtgcagcgagagctgcggccggagcgcagtcatccccgcctcctccccaagggcagc gacagcagaaggtacaacatgaacgcccggccgacccagctgcctcgagcgactccctggcgctccctgccttgcccgcg caccgaactccgcctcgacctggtactctgtggcggacagaccttccggtggtctgaaagcagccctggctgctggactg gcgtgctggctggacgagtctggactctcacgcagtctgaggaacatctgtggtacaccttgcatgaggaggagaaggag gatgggggcagagaggaggaaggcctctccgaacctcccatgaagaagagcaggaagcaagcacagccggaacctaatcg tgctgggacaagcgaacgtccgggcagccatttgcctgcagagctggctcggggagcagacgggttgactccttctcaga tcctccaggactatttccagctacacgtcaacgtgtctgccttataccagggttggtcttacgttgactcacatttccgg gaagtaggtgttaaattcccaggcgtccgggtgctgcggcaggacccagtggagtgcctcttctcctttatctgcacctc caacaaccacttgtcccgcatcaccaacatgattcaacacctgtgccaggcctttgggcgccgcctctgccagctggata ccaagacctatcatgccttcccctcactgcaagccatggcaggagcagatacagaggcccggctgagggacctgggattc ggttatcgggcccggtttattagtgagagcgcccgggctgtcctgaagactcttggtggggccgctggcctccagcagtt gcgcactgtcccttatgagcaggctcggcatgccttatgcacccttccaggagtgggagtcaaggtggctgactgtgtgt gcctcatggcactggacaagactgaggctgtaccagtggacacacacatatggcaggttgccaaacgttactatggccaa gagttggggatgggggcccgcagtgtgacggagcgtgtccatcgagagattggaaatttcttccgcagcctttggggacc gtattctggatgggcccaagcagtccttttttgtgctgacctaaggaagaaccaagagtcctcagatccaaataccaaac accgttgcatcaaagtggctcagagcagccactccaccttgacatagttaacttctcttgcagctccaccttatttatgg gactgatacaggcaagtctgtttcttccttttgtctttgaccatttctagtagtttgggggcaaagatctacttattttt atccttttataaagtgcttctaagttatttctaagtgctgtattaatcgtaataaaacaatcctggtattgtccctta |
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Protein
| Protein ID | habu1_s264_g01343.t1 |
|---|---|
| Definition | - |
>habu1_s264_g01343.t1 MVVLRTRRYGFCAKLVQRELRPERSHPRLLPKGSDSRRYNMNARPTQLPRATPWRSLPCPRTELRLDLVLCGGQTFRWSE SSPGCWTGVLAGRVWTLTQSEEHLWYTLHEEEKEDGGREEEGLSEPPMKKSRKQAQPEPNRAGTSERPGSHLPAELARGA DGLTPSQILQDYFQLHVNVSALYQGWSYVDSHFREVGVKFPGVRVLRQDPVECLFSFICTSNNHLSRITNMIQHLCQAFG RRLCQLDTKTYHAFPSLQAMAGADTEARLRDLGFGYRARFISESARAVLKTLGGAAGLQQLRTVPYEQARHALCTLPGVG VKVADCVCLMALDKTEAVPVDTHIWQVAKRYYGQELGMGARSVTERVHREIGNFFRSLWGPYSGWAQAVLFCADLRKNQE SSDPNTKHRCIKVAQSSHSTLT |
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