Gene
| Gene Model ID | habu1_s264_g01345 |
|---|---|
| Locus | habu1_scaffold264 : 479943 ... 502404 : - |
| To GenomeBrowser | habu1_scaffold264:479943..502404 |
| Genes list of scaffold | habu1_scaffold264 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| secretagogin isoform x1 | GO:0005509 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s264_g01345.t1 | 2 | 1 | EF-hand_7 | 17 | 84 | 4.3e-19 | 68.4 | 3.2e-09 | 4.7e-06 | 26.6 |
| habu1_s264_g01345.t1 | 2 | 1 | EF-hand_1 | 106 | 133 | 1.3e-24 | 83.5 | 8.7e-09 | 1.3e-05 | 24.1 |
| habu1_s264_g01345.t1 | 2 | 1 | EF-hand_6 | 106 | 133 | 1.9e-21 | 73.9 | 4.4e-08 | 6.5e-05 | 22.4 |
| habu1_s264_g01345.t1 | 2 | 2 | EF-hand_7 | 108 | 174 | 4.3e-19 | 68.4 | 1.3e-12 | 2.0e-09 | 37.4 |
| habu1_s264_g01345.t1 | 1 | 1 | EF-hand_8 | 119 | 173 | 3.5e-11 | 42.5 | 2.1e-10 | 3.1e-07 | 29.9 |
| habu1_s264_g01345.t1 | 2 | 2 | EF-hand_1 | 152 | 176 | 1.3e-24 | 83.5 | 1.6e-08 | 2.4e-05 | 23.3 |
| habu1_s264_g01345.t1 | 2 | 1 | EF-hand_5 | 155 | 174 | 3.2e-16 | 57.8 | 1.4e-06 | 0.002 | 17.3 |
| habu1_s264_g01345.t1 | 2 | 2 | EF-hand_6 | 156 | 176 | 1.9e-21 | 73.9 | 8.3e-07 | 0.0012 | 18.5 |
| habu1_s264_g01345.t1 | 2 | 2 | EF-hand_5 | 249 | 264 | 3.2e-16 | 57.8 | 4.7e-06 | 0.0069 | 15.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s264_g01345.t1 | gi|602630150|ref|XP_007421993.1| | PREDICTED: secretagogin [Python bivittatus] | 0.0 |
| habu1_s264_g01345.t1 | gi|327270080|ref|XP_003219819.1| | PREDICTED: secretagogin isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s264_g01345.t1 | gi|542147942|ref|XP_005482962.1| | PREDICTED: secretagogin [Zonotrichia albicollis] | 0.0 |
| habu1_s264_g01345.t1 | gi|524987873|ref|XP_005041863.1| | PREDICTED: secretagogin isoform X1 [Ficedula albicollis] | 0.0 |
| habu1_s264_g01345.t1 | gi|543341905|ref|XP_005517384.1| | PREDICTED: secretagogin [Pseudopodoces humilis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.3 |
| Venom grand-1 | 0.1 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.1 |
| Brain-1 | 15.9 |
| Eye | 3.6 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.1 |
| Brain-2 | 7.3 |
| Spleen | 10.1 |
| Lung | 0.1 |
| Liver | 5.9 |
| Kidney | 0.1 |
| Pancreas | 0.9 |
| Small intestine | 2.3 |
| Large intestine | 1.5 |
| Stomach | 0.8 |
| heart | 0.0 |
| ovary | 0.2 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s264_g01345.t1 |
|---|---|
| Definition | - |
>habu1_s264_g01345.t1 cgggtcggttcaaaggccggcgccccaaagtttggccgtcgtaagcaccatggacagcgacctcctgccccgcttggacg ttgcaagtttccagagcctctggcagcgcttcgacgctgacgacaatggctacatagaaggaaaagagcttgataacttt ttctgtcatctgcttgagatcctgagcagtaaaagcaccattacagaagaagagcttcagagggtgaaaaaacaattaat gtcaaccttcagtgtgactgatgatggacgcttacaaatacaagagctggcaaatatgattttgactgaggaagacaact ttctgctacttttccaaagagaaactcctttgaattacagtgtggagttcatgcggatttggcgtcattatgatgctgac agcagtggctttatttcagccggtgaactccgagactttctgcaagatctgtttcggcagcatggaaaaaacgtttccga ggcaaaactgcaagaatatactgataccatgatgaagctctttgacaaaaataaagatggccggctggatctgaatgacc tcgcaagaattttagctcttcaggaaaattttcttcttcaatttaaactggatgcttcgagtgcagaagaaagaaaaaga gattttgagaaaatctttgcacactatgatgttagtaagacaggagctcttgaaggtccagaagttgatgggtttgtaaa agatatgatggaacttgtcaagcccagcattactggtacagatttggataaattccgagagatcctgcttcatcactgtg atgtgaacaaggatggaaaaatccaaaaatctgaacttgccttatgtctgggaattaaaattaccccataggcattagta gtatacttttcctatggtctaacaggtttttttttcttttgtgaaaacttgtgaaaacatttgtgaaacctttttcagta ctatgtaataatctgctatattaaacttagaagataagctcataaag |
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Protein
| Protein ID | habu1_s264_g01345.t1 |
|---|---|
| Definition | - |
>habu1_s264_g01345.t1 MDSDLLPRLDVASFQSLWQRFDADDNGYIEGKELDNFFCHLLEILSSKSTITEEELQRVKKQLMSTFSVTDDGRLQIQEL ANMILTEEDNFLLLFQRETPLNYSVEFMRIWRHYDADSSGFISAGELRDFLQDLFRQHGKNVSEAKLQEYTDTMMKLFDK NKDGRLDLNDLARILALQENFLLQFKLDASSAEERKRDFEKIFAHYDVSKTGALEGPEVDGFVKDMMELVKPSITGTDLD KFREILLHHCDVNKDGKIQKSELALCLGIKITP |
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