Gene
| Gene Model ID | habu1_s264_g01346 |
|---|---|
| Locus | habu1_scaffold264 : 516350 ... 541754 : - |
| To GenomeBrowser | habu1_scaffold264:516350..541754 |
| Genes list of scaffold | habu1_scaffold264 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| leucine-rich repeat-containing protein 16a isoform x2 | GO:0016477 GO:0022607 GO:0030833 GO:0030834 GO:0043227 GO:0043229 GO:0044089 GO:0051495 GO:0097581 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s264_g01346.t1 | gi|602630154|ref|XP_007421995.1| | PREDICTED: leucine-rich repeat-containing protein 16A isoform X2 [Python bivittatus] | 0.0 |
| habu1_s264_g01346.t1 | gi|602630152|ref|XP_007421994.1| | PREDICTED: leucine-rich repeat-containing protein 16A isoform X1 [Python bivittatus] | 0.0 |
| habu1_s264_g01346.t1 | gi|591371275|ref|XP_007060452.1| | PREDICTED: leucine-rich repeat-containing protein 16A isoform X1 [Chelonia mydas] | 0.0 |
| habu1_s264_g01346.t1 | gi|530574148|ref|XP_005281477.1| | PREDICTED: leucine-rich repeat-containing protein 16A isoform X2 [Chrysemys picta bellii] | 0.0 |
| habu1_s264_g01346.t1 | gi|677973202|ref|XP_009071773.1| | PREDICTED: leucine-rich repeat-containing protein 16A-like [Acanthisitta chloris] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 9.9 |
| Venom grand-1 | 15.2 |
| Pit, infrared sensing | 6.6 |
| Nose | 12.3 |
| Brain-1 | 9.9 |
| Eye | 7.1 |
| fetal fibroblast | 12.1 |
| venom gland-2 | 13.1 |
| Brain-2 | 7.6 |
| Spleen | 7.9 |
| Lung | 12.6 |
| Liver | 15.3 |
| Kidney | 10.4 |
| Pancreas | 5.3 |
| Small intestine | 14.5 |
| Large intestine | 12.1 |
| Stomach | 8.3 |
| heart | 6.6 |
| ovary | 32.7 |
| cheek muscle | 3.4 |
Transcript
| Transcript ID | habu1_s264_g01346.t1 |
|---|---|
| Definition | - |
>habu1_s264_g01346.t1 acctgggcgtcctcctggatactcggctgtctttagacaaccatatgacagccgtggccaggggggcttttcatcaggtt cgcctgatacgccagttgcgcccctttctggatcgtgatgctctacgcacggtcactcaagccctcgtttcccgcctgga ctattgcaacgctctctacatggggctccccttgaggtgcacctggaggctccagctagttcagaatgcggccgcacggg ggatcctgggggcctctagatactcccatgtaacacctctcctgcgcgagctgcactggctgcctgtggccttccgggtg cgcttcaaggtgttagtaacaacctttaatgcgctccgtggcaatggacctagtttcggcacggcttgccccttctttct ctcctctaaaactgattctgcttttctgctgtccattcatattcttttatctttcccttttggctgcatggagactctct gctgtacaagtatgactcccaaatctaaaaggaagagtatccacagtcgaatgttaaggcccgtatccagagcttttgag atggagtttgaccttgacaaagcattagaagaagttcctattcatatagaggacttacctttccattccgggaagtttga caaacggacttctgggttcatttcagaactaccttcggaggaagggaaaaagctagagcattttactaaacttaggccta aaaggaataaaaaacaacagccaacacaatctgccgtgagtcctgcaacctttcaagagggagaacagaatggaatgatg ggaagagtagatgaaggtgttgatgaatttttcaccaagaaagtgacaaaaatggattcaaagaagtcctccacaaaagg ctcagacagcagtgatcctggtgaagtaggtgacgaaaagaaaaaaagagattctcggaaaagtggctttcttaatttaa tcaaacctagatccaaatctgagcgtccttcaactgtgttaatgcctgaagaatcttcatctcccagaagtgttgtcaaa ggccccactgtagagactgcaaagaaggatttgaagtcagccgaacaaaatggcacctctgaaaaaactgaggaattaaa aacaccagattcagcagaagaggttcctttggaggatgcgtcaaagcttgaaaagggtgacagcaaaggcagtcctcaag gaggacgtaggtatggggtgcagatgatgggcagtggccttcttgcagaaataaaagccaagcaggaacggagagcagca tcagcacagaagaaattagggaatgatgttagagattcagcagatctttcactgaattcagaacgacaggatggagctgt aatgaaacttcatcagtcttctccagagaatcagttagctctcagtagggaagattctatcacagtctcgacagaaaaaa attcaaaagctgaaccaaagatagaaattggagctaggacaaaaagttcttctagcgccccttccagtccaaaacctcca ctgcagtccacaaaacccaccctaacaggacgaccaacagttcctcagaagccacggtctgcttcgcggacagatgatgt cccagagtctcagtccagtccaagttccccaaaaattgccctacttccccctgttttgaagagagttccgtctgataaag aaaaagatagtcaaagcagccctcaggcagctctcagacctctttcacatgaaggtccaaagaaaagcccaggacatcag atttctgaatcccaggaacaaaagcagagacctttaaggaaaaatggccagcaaggaagcaagtccagtgactctggaga agagccagataaagactttatttttatttaattggttgattatgggcttaacagtgcagatactttcgtgataatggagt ccaactactactgaccccattagcttttcctttctatttttttttttaagaagcgtctcaaagatcaatatttgcactgg gaatctgattaaaaaataatttgggttttttttctaattatttccagatattctctatcatgcctttgctaaagccagca actattccatgtcttctacttgaattttctgaagcagctacaaaaataatgccttgcattagagctttgtggttgaaaaa actcaaagcaaatagattggtcattttcttacactaacccattactgtgcagcaggaaaagtgttggactgctgaatgta aatttgtcaaacttgcacgcgacttactttataaatatattcttgctgaatgcaattgcacattgtaattatatcaacag agcacactaataaaagaatttgtataaataatatat |
|
Protein
| Protein ID | habu1_s264_g01346.t1 |
|---|---|
| Definition | - |
>habu1_s264_g01346.t1 MTAVARGAFHQVRLIRQLRPFLDRDALRTVTQALVSRLDYCNALYMGLPLRCTWRLQLVQNAAARGILGASRYSHVTPLL RELHWLPVAFRVRFKVLVTTFNALRGNGPSFGTACPFFLSSKTDSAFLLSIHILLSFPFGCMETLCCTSMTPKSKRKSIH SRMLRPVSRAFEMEFDLDKALEEVPIHIEDLPFHSGKFDKRTSGFISELPSEEGKKLEHFTKLRPKRNKKQQPTQSAVSP ATFQEGEQNGMMGRVDEGVDEFFTKKVTKMDSKKSSTKGSDSSDPGEVGDEKKKRDSRKSGFLNLIKPRSKSERPSTVLM PEESSSPRSVVKGPTVETAKKDLKSAEQNGTSEKTEELKTPDSAEEVPLEDASKLEKGDSKGSPQGGRRYGVQMMGSGLL AEIKAKQERRAASAQKKLGNDVRDSADLSLNSERQDGAVMKLHQSSPENQLALSREDSITVSTEKNSKAEPKIEIGARTK SSSSAPSSPKPPLQSTKPTLTGRPTVPQKPRSASRTDDVPESQSSPSSPKIALLPPVLKRVPSDKEKDSQSSPQAALRPL SHEGPKKSPGHQISESQEQKQRPLRKNGQQGSKSSDSGEEPDKDFIFI |
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