Gene
| Gene Model ID | habu1_s2690_g09598 |
|---|---|
| Locus | habu1_scaffold2690 : 442237 ... 466883 : + |
| To GenomeBrowser | habu1_scaffold2690:442237..466883 |
| Genes list of scaffold | habu1_scaffold2690 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2690_g09598.t2 | 1 | 1 | HEM4 | 18 | 164 | 2.5e-20 | 72.7 | 7.4e-24 | 3.7e-20 | 72.1 |
| habu1_s2690_g09598.t2 | 1 | 1 | RVT_1 | 293 | 505 | 1.3e-34 | 119.5 | 4.1e-38 | 2.0e-34 | 118.8 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.0 |
| Venom grand-1 | 4.2 |
| Pit, infrared sensing | 2.1 |
| Nose | 1.9 |
| Brain-1 | 2.8 |
| Eye | 2.0 |
| fetal fibroblast | 3.7 |
| venom gland-2 | 5.5 |
| Brain-2 | 3.2 |
| Spleen | 3.1 |
| Lung | 4.8 |
| Liver | 3.4 |
| Kidney | 2.6 |
| Pancreas | 3.4 |
| Small intestine | 2.0 |
| Large intestine | 3.0 |
| Stomach | 3.3 |
| heart | 5.4 |
| ovary | 3.4 |
| cheek muscle | 5.7 |
Transcript
| Transcript ID | habu1_s2690_g09598.t1 |
|---|---|
| Definition | - |
>habu1_s2690_g09598.t1 ggctttgcaggcttagatgggtacaactcttctacaaaaaagaatcctgatttagattaatttccattttgtgcttccct attacaaggtgttacacaagtaaacaatgaaagtgttgttattgaaagatccaaaagaaagtgatagtggaccagattct tacataaaggaacttggttcacacggactcaaagcaaccttaattccagttttagcatttgaatttatttctcttcaaac tttctctgaaaaactttttcatcctaaacaataccatggattaatttttaccagtccaagagcagtagaagctgttaagt taggcctagtggatagttgtaaaaaagaagcttggaagaattatctaagagaagaatggaatactaaacctgtttatgtg gtagggaaagctactgctggattagtaactgaaataggtctcaaaccacaaggagaagattgtggaaatgctgaaaaact agcagaattcatttgctaccgggagccatccaattcattgcctcttctttttccatgtggtgctctaaaaagggaaacgc ttccaacaatgctcaaggacaaaggtagaaatatttcccaactaatgccaatgattggtccattagtgggtgaaagtggc aagaaggtgacaagcaacagggagaaagcagaactatttaactcgtttttcgcatctgtctttacacaaagggaaaaaac agaccaacctatcaaaaacagtgccataaaaaacagaatagaaacacaagttaagataggcaagaaaatggtaagtgagc acctgtccagcctagacaagttcaaatcaccaggaccaaatggattacaccccaaggttctcaaggaactggcagatgtg atctcagaaccactgaactatatttttcaaagatcctggagcactggggaactacctgaggactggaaaagagctgatgt agttcccatcttcaaaaaaggaaaaaaaatggatccaggaaattacagacctatcagcctgacctcaatacctgggaaga ttctggaaaagataatcaaacaacgaatcagcgaacacctagaggcaaaccaagtcattactaaaagccaacacaggttt gtcaaaaacagatcatgccagacaaatcttattgcattctttgaccaagtgacaaaattagtggaccagaggaatgctgt ggatataatttacttggatttcagtaacgcatttgccaaagtagaggacaacctactacttgataagatagaaaaatgtg ggttagacagcatcaccaccagatggatccgtagctggctgaccggctgtactcagcgtgtggtcctcaatggaaccaca tctacatggagggaagtgtgtagtggggtgccccagggctctgttctgggcccagtgctcttcaacatcttcatcaacga tttggacgagggggtagatggggaactcatcaaatttgcagacaacaccaagctggcaggaatagccaacattccagaag acaagcttaggatacaggaggatctggacagacttgaacactgggcactatctaacaaaatgaaattcagtgaaaaaagt aaggttctacatttaggcaagaaaaaccaaatatacaagtatagtatagggggtaccttgctcaacagtagtaactgtga gagggatcttggagtcctagtggacaatcatttaaatatgagccagcagtgtgctgcagctgccaaaaaagccaacacag ttctaggctgcattaacagagggatagaatcaagatcacgcgaagtattaataccattctacaatgccttgatattgtat tggaatccatcactgtttatcaaaccagtcaacatcctgacctccaggaatccttgacgaattacttctcacaagagggt gttcctgctggtattattttcttcagtccttctggtgtcaagtactgtctgaagcagattttgaaattgtcaggtgatct catttcccaaattaagtttgccgcaataggtccaacaacagctggagctcttgtaaatgaaggaatcttcgtaagctgta cagccagtcgccctaccccccaggatcttgctgctgaacttagaaaatgtctctagctgtaatacatttgaagactctat gattgaaattatgtaatttgcagtaatatctaaaattaaaaataccttctttacgattaatattgggttattcctggcaa tcattggaagtatacatctctgatgttttgaacacttttctgttgtattagtagcagtgattaatgctgctgtacactaa cctggattatatgatgtgtattctaactaatgtttgataagctggctttgtttacacaaaaagaatctgaattgtagctt caaattgtttttgcatttccttagaagataaaaatagatgatatacctgaataaatatattcatcaggctgtattttagg gaagcagagcaccgaaacaaccaattaaattgaaggcattagataagaaaaaagaagtaaataaattaaatctagttttc atcaata |
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| Transcript ID | habu1_s2690_g09598.t2 |
| Definition | - |
>habu1_s2690_g09598.t2 ggctttgcaggcttagatgggtgttacacaagtaaacaatgaaagtgttgttattgaaagatccaaaagaaagtgatagt ggaccagattcttacataaaggaacttggttcacacggactcaaagcaaccttaattccagttttagcatttgaatttat ttctcttcaaactttctctgaaaaactttttcatcctaaacaataccatggattaatttttaccagtccaagagcagtag aagctgttaagttaggcctagtggatagttgtaaaaaagaagcttggaagaattatctaagagaagaatggaatactaaa cctgtttatgtggtagggaaagctactgctggattagtaactgaaataggtctcaaaccacaaggagaagattgtggaaa tgctgaaaaactagcagaattcatttgctaccgggagccatccaattcattgcctcttctttttccatgtggtgctctaa aaagggaaacgcttccaacaatgctcaaggacaaaggtagaaatatttcccaactaatgccaatgattggtccattagtg ggtgaaagtggcaagaaggtgacaagcaacagggagaaagcagaactatttaactcgtttttcgcatctgtctttacaca aagggaaaaaacagaccaacctatcaaaaacagtgccataaaaaacagaatagaaacacaagttaagataggcaagaaaa tggtaagtgagcacctgtccagcctagacaagttcaaatcaccaggaccaaatggattacaccccaaggttctcaaggaa ctggcagatgtgatctcagaaccactgaactatatttttcaaagatcctggagcactggggaactacctgaggactggaa aagagctgatgtagttcccatcttcaaaaaaggaaaaaaaatggatccaggaaattacagacctatcagcctgacctcaa tacctgggaagattctggaaaagataatcaaacaacgaatcagcgaacacctagaggcaaaccaagtcattactaaaagc caacacaggtttgtcaaaaacagatcatgccagacaaatcttattgcattctttgaccaagtgacaaaattagtggacca gaggaatgctgtggatataatttacttggatttcagtaacgcatttgccaaagtagaggacaacctactacttgataaga tagaaaaatgtgggttagacagcatcaccaccagatggatccgtagctggctgaccggctgtactcagcgtgtggtcctc aatggaaccacatctacatggagggaagtgtgtagtggggtgccccagggctctgttctgggcccagtgctcttcaacat cttcatcaacgatttggacgagggggtagatggggaactcatcaaatttgcagacaacaccaagctggcaggaatagcca acattccagaagacaagcttaggatacaggaggatctggacagacttgaacactgggcactatctaacaaaatgaaattc agtgaaaaaagtaaggttctacatttaggcaagaaaaaccaaatatacaagtatagtatagggggtaccttgctcaacag tagtaactgtgagagggatcttggagtcctagtggacaatcatttaaatatgagccagcagtgtgctgcagctgccaaaa aagccaacacagttctaggctgcattaacagagggatagaatcaagatcacgcgaagtattaataccattctacaatgcc ttgatattgtattggaatccatcactgtttatcaaaccagtcaacatcctgacctccaggaatccttgacgaattacttc tcacaagagggtgttcctgctggtattattttcttcagtccttctggtgtcaagtactgtctgaagcagattttgaaatt gtcaggtgatctcatttcccaaattaagtttgccgcaataggtccaacaacagctggagctcttgtaaatgaaggaatct tcgtaagctgtacagccagtcgccctaccccccaggatcttgctgctgaacttagaaaatgtctctagctgtaatacatt tgaagactctatgattgaaattatgtaatttgcagtaatatctaaaattaaaaataccttctttacgattaatattgggt tattcctggcaatcattggaagtatacatctctgatgttttgaacacttttctgttgtattagtagcagtgattaatgct gctgtacactaacctggattatatgatgtgtattctaactaatgtttgataagctggctttgtttacacaaaaagaatct gaattgtagcttcaaattgtttttgcatttccttagaagataaaaatagatgatatacctgaataaatatattcatcagg ctgtattttagggaagcagagcaccgaaacaaccaattaaattgaaggcattagataagaaaaaagaagtaaataaatta aatctagttttcatcaata |
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Protein
| Protein ID | habu1_s2690_g09598.t1 |
|---|---|
| Definition | - |
>habu1_s2690_g09598.t1 MKVLLLKDPKESDSGPDSYIKELGSHGLKATLIPVLAFEFISLQTFSEKLFHPKQYHGLIFTSPRAVEAVKLGLVDSCKK EAWKNYLREEWNTKPVYVVGKATAGLVTEIGLKPQGEDCGNAEKLAEFICYREPSNSLPLLFPCGALKRETLPTMLKDKG RNISQLMPMIGPLVGESGKKVTSNREKAELFNSFFASVFTQREKTDQPIKNSAIKNRIETQVKIGKKMVSEHLSSLDKFK SPGPNGLHPKVLKELADVISEPLNYIFQRSWSTGELPEDWKRADVVPIFKKGKKMDPGNYRPISLTSIPGKILEKIIKQR ISEHLEANQVITKSQHRFVKNRSCQTNLIAFFDQVTKLVDQRNAVDIIYLDFSNAFAKVEDNLLLDKIEKCGLDSITTRW IRSWLTGCTQRVVLNGTTSTWREVCSGVPQGSVLGPVLFNIFINDLDEGVDGELIKFADNTKLAGIANIPEDKLRIQEDL DRLEHWALSNKMKFSEKSKVLHLGKKNQIYKYSIGGTLLNSSNCERDLGVLVDNHLNMSQQCAAAAKKANTVLGCINRGI ESRSREVLIPFYNALILYWNPSLFIKPVNILTSRNP |
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| Protein ID | habu1_s2690_g09598.t2 |
| Definition | - |
>habu1_s2690_g09598.t2 MKVLLLKDPKESDSGPDSYIKELGSHGLKATLIPVLAFEFISLQTFSEKLFHPKQYHGLIFTSPRAVEAVKLGLVDSCKK EAWKNYLREEWNTKPVYVVGKATAGLVTEIGLKPQGEDCGNAEKLAEFICYREPSNSLPLLFPCGALKRETLPTMLKDKG RNISQLMPMIGPLVGESGKKVTSNREKAELFNSFFASVFTQREKTDQPIKNSAIKNRIETQVKIGKKMVSEHLSSLDKFK SPGPNGLHPKVLKELADVISEPLNYIFQRSWSTGELPEDWKRADVVPIFKKGKKMDPGNYRPISLTSIPGKILEKIIKQR ISEHLEANQVITKSQHRFVKNRSCQTNLIAFFDQVTKLVDQRNAVDIIYLDFSNAFAKVEDNLLLDKIEKCGLDSITTRW IRSWLTGCTQRVVLNGTTSTWREVCSGVPQGSVLGPVLFNIFINDLDEGVDGELIKFADNTKLAGIANIPEDKLRIQEDL DRLEHWALSNKMKFSEKSKVLHLGKKNQIYKYSIGGTLLNSSNCERDLGVLVDNHLNMSQQCAAAAKKANTVLGCINRGI ESRSREVLIPFYNALILYWNPSLFIKPVNILTSRNP |
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