Gene
| Gene Model ID | habu1_s2696_g09611 |
|---|---|
| Locus | habu1_scaffold2696 : 355251 ... 358565 : - |
| To GenomeBrowser | habu1_scaffold2696:355251..358565 |
| Genes list of scaffold | habu1_scaffold2696 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| actin-related protein 2 3 complex subunit 3 | GO:0003779 GO:0005737 GO:0005885 GO:0034314 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2696_g09611.t1 | 1 | 1 | P21-Arc | 3 | 165 | 0.0 | 257.2 | 0.0 | 0.0 | 257.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2696_g09611.t1 | gi|602672670|ref|XP_007441836.1| | PREDICTED: actin-related protein 2/3 complex subunit 3 [Python bivittatus] | 0.0 |
| habu1_s2696_g09611.t1 | gi|564268166|ref|XP_006272882.1| | PREDICTED: actin-related protein 2/3 complex subunit 3 [Alligator mississippiensis] | 0.0 |
| habu1_s2696_g09611.t1 | gi|334327105|ref|XP_001372889.2| | PREDICTED: actin-related protein 2/3 complex subunit 3 [Monodelphis domestica] | 0.0 |
| habu1_s2696_g09611.t1 | gi|466043204|ref|XP_004276775.1| | PREDICTED: actin-related protein 2/3 complex subunit 3 [Orcinus orca] | 0.0 |
| habu1_s2696_g09611.t1 | gi|640824574|ref|XP_008069364.1| | PREDICTED: actin-related protein 2/3 complex subunit 3 [Tarsius syrichta] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 45.7 |
| Venom grand-1 | 63.9 |
| Pit, infrared sensing | 45.5 |
| Nose | 45.7 |
| Brain-1 | 22.5 |
| Eye | 32.5 |
| fetal fibroblast | 117.2 |
| venom gland-2 | 61.7 |
| Brain-2 | 28.0 |
| Spleen | 54.2 |
| Lung | 53.9 |
| Liver | 42.0 |
| Kidney | 46.8 |
| Pancreas | 56.2 |
| Small intestine | 71.8 |
| Large intestine | 81.5 |
| Stomach | 72.5 |
| heart | 39.5 |
| ovary | 21.6 |
| cheek muscle | 56.2 |
Transcript
| Transcript ID | habu1_s2696_g09611.t1 |
|---|---|
| Definition | - |
>habu1_s2696_g09611.t1 caccgccgccgagatgccggcctatcactccactttgatggaccccgacaccaaactcgtggggaacatggctctgttgc ccatcaggagtcagttcaaaggaccagctcctcgtgaaacgaaagatacggacataattgatgaagccatctactacttc aaagccaatgtcttctttaaaaattatgaaatcaagaatgaggctgacagaaccttgatctacatcactctctatatttc agagtgcttgaaaaagttacagaagtgcaattccaaaggccagggggaaaaagaaatgtatactttggggatcaccaatt tcccaatgcctggagaaccgggatttccactgaacgctctttacgctagacccagcagtaaacaggaagaagaggttatg cgagggtatttgcagcaactgaggcaagaaaccggcttgaggctttgcgaaaaggtctttgatccccagagtgacaaacc cagcaagtggtggacctgttttgtgaaaaggcaattcatgaacaaaagcctatcagggccaggacagtgagggcagcggc tggatctttggttataagcgctctgttcacagggctagtcagataatattgcttctaatataagttttctactaaaagag aaaaggtgtttctggatgcaaggccactgatgggaggaagggcggagctaaaaaaaatcatgtgcaatgtttgtcaagct tgataataataataaaaataaaagttctttctaatgctgttttatctgtatttgctctgaggcttgaatttggaagagct tagctattattcgtaatggctgggaattacgagagacgctcagaaggcattgagtaggaaagactgttgggaatttttaa tagatttgcagggtacatctgctccgaagtttaagtcccgtgcaagcagtgcagggcaagaaaggagcagatccacaatt gcatagcacaaagccattctttccaagaaaacatgcataaaagattcactctgtgtgagttgggggtccataaatctatt aaatgcataaataaataaaagctctgttgctgtagcaataaatagcccgttgctatgaggagcaaaatgttctagctctc tctcatccttatttattttcaaataaaaacttcttgccaaggatctggt |
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Protein
| Protein ID | habu1_s2696_g09611.t1 |
|---|---|
| Definition | - |
>habu1_s2696_g09611.t1 MDPDTKLVGNMALLPIRSQFKGPAPRETKDTDIIDEAIYYFKANVFFKNYEIKNEADRTLIYITLYISECLKKLQKCNSK GQGEKEMYTLGITNFPMPGEPGFPLNALYARPSSKQEEEVMRGYLQQLRQETGLRLCEKVFDPQSDKPSKWWTCFVKRQF MNKSLSGPGQ |
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