Gene
| Gene Model ID | habu1_s2696_g09612 |
|---|---|
| Locus | habu1_scaffold2696 : 359627 ... 362635 : - |
| To GenomeBrowser | habu1_scaffold2696:359627..362635 |
| Genes list of scaffold | habu1_scaffold2696 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| gpn-loop gtpase 3 | GO:0043234 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2696_g09612.t1 | 1 | 1 | ATP_bind_1 | 1 | 232 | 0.0 | 272.3 | 0.0 | 0.0 | 272.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2696_g09612.t1 | gi|602672672|ref|XP_007441837.1| | PREDICTED: GPN-loop GTPase 3 [Python bivittatus] | 0.0 |
| habu1_s2696_g09612.t1 | gi|327276068|ref|XP_003222793.1| | PREDICTED: GPN-loop GTPase 3 [Anolis carolinensis] | 0.0 |
| habu1_s2696_g09612.t1 | gi|126324204|ref|XP_001363781.1| | PREDICTED: GPN-loop GTPase 3 isoform X1 [Monodelphis domestica] | 0.0 |
| habu1_s2696_g09612.t1 | gi|612013530|ref|XP_007489912.1| | PREDICTED: GPN-loop GTPase 3 isoform X2 [Monodelphis domestica] | 0.0 |
| habu1_s2696_g09612.t1 | gi|558218183|ref|XP_006135225.1| | PREDICTED: GPN-loop GTPase 3 [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 11.3 |
| Venom grand-1 | 22.2 |
| Pit, infrared sensing | 17.4 |
| Nose | 12.8 |
| Brain-1 | 9.9 |
| Eye | 15.9 |
| fetal fibroblast | 10.2 |
| venom gland-2 | 16.4 |
| Brain-2 | 7.0 |
| Spleen | 11.2 |
| Lung | 12.4 |
| Liver | 15.6 |
| Kidney | 9.5 |
| Pancreas | 6.7 |
| Small intestine | 9.0 |
| Large intestine | 7.1 |
| Stomach | 7.4 |
| heart | 11.6 |
| ovary | 7.2 |
| cheek muscle | 24.1 |
Transcript
| Transcript ID | habu1_s2696_g09612.t1 |
|---|---|
| Definition | - |
>habu1_s2696_g09612.t1 attcgttgtcgtcttttttttccccccccctcctcccttattccgggggcggccttcttggcccgggggtggccatgcct cgctatgcccagctggtgatggggcctgcggggagcgggaagagcacctattgctccatcatggtccagcactgcgaagc cctcaaccgttctgtgcaggttgtgaacctcgatccagcagcagagcacttcaactacgacgtcatggcagatatccgag agttgattgaagtggacgatgtcatggaagatgattccctccggttcggccccaacggcggcttagttttttgcatggaa tattttgcgaacaattttgattggctggaagaatgccttggtcatgtggaagacgattacatcctgttcgattgcccagg tcagattgaactctacactcacttgcctgtgatgaaacaatttgtagagaagctgcaacagtgggaatttcacgtctgtg gtgtttttcttgtcgattctcaattcatggtggaatcttttaagtttatttccggtgcgatggcagctctcagtgccatg gtttccttagagattccccagattaatgtcatgtccaagatggatttgctgagcaagaaagcaaaaaacgagatcgaaaa atatctggatccagacatgtactcttccctggatgattcgacagacctgctcaaaagcaggcggtttaagaaattaacca aagctatctgtggcttgatcgatgattacagcatggttcgcttcctgccgctcgatcgctccgacgaggagagcgtcagc atcgtcctgcaacatattgatttcgccattcagtacggggaagacctggaatttaaggagccaaaggaaacagaggaaga gaaatcttcagcttttgatgaattcttccaggatcaagtggatgaatgaaaggttttgatttcactcaaacgcacagaaa aaggtcttgcgtttctccacgctgcattcacaaactgttggaagcaatcaaagaatggggctctttgcccacacggggtt taagatgtaaaaatggatccagccacagagttttatttttggaaggtgttaagtatgcattataagaaataaattattgt gttttgtttttcttc |
|
Protein
| Protein ID | habu1_s2696_g09612.t1 |
|---|---|
| Definition | - |
>habu1_s2696_g09612.t1 MVQHCEALNRSVQVVNLDPAAEHFNYDVMADIRELIEVDDVMEDDSLRFGPNGGLVFCMEYFANNFDWLEECLGHVEDDY ILFDCPGQIELYTHLPVMKQFVEKLQQWEFHVCGVFLVDSQFMVESFKFISGAMAALSAMVSLEIPQINVMSKMDLLSKK AKNEIEKYLDPDMYSSLDDSTDLLKSRRFKKLTKAICGLIDDYSMVRFLPLDRSDEESVSIVLQHIDFAIQYGEDLEFKE PKETEEEKSSAFDEFFQDQVDE |
|