Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s2696_g09614
Locus habu1_scaffold2696 : 367376 ... 374045 : +
To GenomeBrowser habu1_scaffold2696:367376..374045
Genes list of scaffold habu1_scaffold2696

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s2696_g09614.t1 gi|602672676|ref|XP_007441839.1| PREDICTED: coiled-coil domain-containing protein 62 [Python bivittatus] 0.0
habu1_s2696_g09614.t1 gi|723579249|ref|XP_010309856.1| PREDICTED: coiled-coil domain-containing protein 62 [Balearica regulorum gibbericeps] 0.0
habu1_s2696_g09614.t1 gi|686610997|ref|XP_009282185.1| PREDICTED: coiled-coil domain-containing protein 62 isoform X2 [Aptenodytes forsteri] 0.0
habu1_s2696_g09614.t1 gi|697842125|ref|XP_009641412.1| PREDICTED: coiled-coil domain-containing protein 62 [Egretta garzetta] 0.0
habu1_s2696_g09614.t1 gi|690436287|ref|XP_009319454.1| PREDICTED: coiled-coil domain-containing protein 62 isoform X1 [Pygoscelis adeliae] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 2.0
Venom grand-1 4.1
Pit, infrared sensing 1.8
Nose 4.8
Brain-1 0.3
Eye 1.9
fetal fibroblast 0.0
venom gland-2 4.7
Brain-2 0.3
Spleen 2.6
Lung 5.0
Liver 0.2
Kidney 2.1
Pancreas 10.7
Small intestine 6.9
Large intestine 7.9
Stomach 8.4
heart 0.1
ovary 1.1
cheek muscle 0.4

Transcript
Transcript IDhabu1_s2696_g09614.t1
Definition-
>habu1_s2696_g09614.t1
ccggaactcgtttctcctgtagacacgggatcacctgcctggggctatgcgtgggtatcattttgtattagagctactat
tataatctaccctaaattaaaatttctatctattaaacaaccccggataacagagtttctctgtgctacacctgaaatga
agttggcttatttgaccctgttctgatctcagaaacctgatgaattcttcactgggcctttccagtcccttccagaacct
cgcctccgaatcagagagcgacattgttcagaaactgaggaaggaactccagctgctacttgcagagctgaaagatcgtg
ataaggagctgaacagcatggtggctgtgcatcataggcaatttttggcttgggaggacaatcgtcagaaaattctgacc
ctggaagaacgaagcagcaggttggaaaatgagctacataagagaaatgaaatgataacaaccctgacacagaggttaaa
gctgcttggatccctgcagaatgactgcagttcgacgctcgaaaacactcagcagaagttgcaggaagtgtctcaaaaag
cctctgacacatctcttcaatgtcagaccctcgaggagaaaaaccaaaccttggttggctccgtgatggacctctcaaac
caagtgggtcagcttcaagctagagagcaagagcttctgacgcttttaagactcaaggataatgatatccttgaagcaac
caatcagatcactgagtttgccagcaaatttaaaaagttagaaagtgctctgtgtgcctccaagatggaagaaaggagtt
tcaaccaggagaaacagaattttaaactgaggctgaaggaaatgatgttagaagcaaacagactgaaaggggatctcagt
gaaaaaaccaaagaaaacagcgcacaaagggaagaaattatacagctgaagcaagaaaacgtttatctaagtcatgaatt
aatgcttaccgccgagagggtgagtcgaaaagatcagctgcttctttctgccaaatcgaaacagcttcggacagacacgg
aactgaacaatttgagacagatctacctgaagcagcaacaggacctgcagtttctgcatttccacctggaaagttcccaa
gaaagcaaagagaaacgcgggacggaatcgcaagatggaagcccagggatggttttgtcagacctcgagaccagcggtga
gcgagactccctctgtggcgaagtcagccggaagatccccacgcatttcgtccaccttcccgactgtcctttgaaaaagg
ccggccacccctgccgagcccagaacaggcagcaagagcagcagacagagcacattcacgaagggctgttttgccatccc
agatgcctccgtcgggaagaggcaacgccgagcagtcccaggagtgctggggagatggaggaccgctcggccgcgcagct
ggacgttccccgaaagtccagatccagggaaacggtttggacgtcggagctgaccactttaccgagacacaaacactggt
ttgaagcgaacttctgcgcagcgtcctcaggctgcctggcgcccagattcttagacaaatccaggggggattgcaaagag
gcttcccaggacccggccagaaccccccctcggcaaagagcctgcgtgcccccccacctggggagccacgcctgcgaatc
gggatgctcggcctgcagcgccgtccgtaaagccagcctctaccagggcctttcaaagcaggagtggaccgagatgcgca
agctggcggagaatgatggcagtggcttatggggcagggagtcatccccgagccctcaggatgctcccgagttgaaaagt
gaccaggatgggaccctgaacggttttgactggggtgcgccctgtttcacatcgaccctgaggtcaaaggagacaaagcc
tgctgagatgccttcagccctggagcacccttcggaccttcggggacccttgggctgctgccagcttcccacccatcacc
attcccgctcgcctgatgaccagctgcagcagatgtgggccgagacccggcagatggtcacccaccttgagcaccgccac
ctgctcagcgctggccctcgctccagcccaaccagcagcctccatacaaaaggggacgatcccaaatccgtttgtgaacg
gaaggtgcccgttgaggaagaaaccagaatgaaactttctccttttgcttctcaagaaagaaacctctcttcctgaaggc
ggaatatcatccccggattgtcacccgccattcagtctggggaagaaaaaaaaatcctcaaaattcgtgactcgatgctg
gcagtccgttccctcaactatatatatatatatattttaaaaattagaattatgccgaaatgaataaaaactatttctag
aaatgttctg

Protein
Protein IDhabu1_s2696_g09614.t1
Definition-
>habu1_s2696_g09614.t1
MNSSLGLSSPFQNLASESESDIVQKLRKELQLLLAELKDRDKELNSMVAVHHRQFLAWEDNRQKILTLEERSSRLENELH
KRNEMITTLTQRLKLLGSLQNDCSSTLENTQQKLQEVSQKASDTSLQCQTLEEKNQTLVGSVMDLSNQVGQLQAREQELL
TLLRLKDNDILEATNQITEFASKFKKLESALCASKMEERSFNQEKQNFKLRLKEMMLEANRLKGDLSEKTKENSAQREEI
IQLKQENVYLSHELMLTAERVSRKDQLLLSAKSKQLRTDTELNNLRQIYLKQQQDLQFLHFHLESSQESKEKRGTESQDG
SPGMVLSDLETSGERDSLCGEVSRKIPTHFVHLPDCPLKKAGHPCRAQNRQQEQQTEHIHEGLFCHPRCLRREEATPSSP
RSAGEMEDRSAAQLDVPRKSRSRETVWTSELTTLPRHKHWFEANFCAASSGCLAPRFLDKSRGDCKEASQDPARTPPRQR
ACVPPHLGSHACESGCSACSAVRKASLYQGLSKQEWTEMRKLAENDGSGLWGRESSPSPQDAPELKSDQDGTLNGFDWGA
PCFTSTLRSKETKPAEMPSALEHPSDLRGPLGCCQLPTHHHSRSPDDQLQQMWAETRQMVTHLEHRHLLSAGPRSSPTSS
LHTKGDDPKSVCERKVPVEEETRMKLSPFASQERNLSS

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