Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s2696_g09616
Locus habu1_scaffold2696 : 417753 ... 429905 : -
To GenomeBrowser habu1_scaffold2696:417753..429905
Genes list of scaffold habu1_scaffold2696

Annotation by Blast2GO
Annotation GO
atp-binding cassette sub-family b member 9 EC:3.6.3.43 GO:0005524 GO:0005765 GO:0008152 GO:0015440 GO:0015833 GO:0030176 GO:0042803 GO:0055085

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s2696_g09616.t3 1 1 ABC_membrane 195 457 0.0 186.1 0.0 0.0 184.8
habu1_s2696_g09616.t3 1 1 ABC_tran 528 677 4.8e-34 117.6 9.6e-37 1.1e-33 116.4
habu1_s2696_g09616.t3 1 1 SMC_N 647 719 4.9e-11 42.2 1.2e-10 1.4e-07 31.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.6
Venom grand-1 0.4
Pit, infrared sensing 0.6
Nose 1.1
Brain-1 2.4
Eye 2.6
fetal fibroblast 0.2
venom gland-2 0.2
Brain-2 2.0
Spleen 0.4
Lung 0.5
Liver 0.0
Kidney 0.2
Pancreas 0.0
Small intestine 0.4
Large intestine 0.7
Stomach 0.4
heart 0.4
ovary 14.8
cheek muscle 0.1

Transcript
Transcript IDhabu1_s2696_g09616.t1
Definition-
>habu1_s2696_g09616.t1
tgtcctgggaagcgctcatcctccgccggccaaaggagattagcgcgtcttgctctcgtctgcaggatttcggagccttt
acacagaatctgttgttggccctgaagttgtaatgatgatcaaagttgagccaatgttttctccagatgttaaggaaaaa
actgagcagtgatgttggcgttaaccctggcctaggagcttcgtgtctcttccttcccttctgttttatgattcccacct
ctctacctcattctggaaccggtttaagatgcgtgcttggacagcggtggccagcaccctcaccttcatagggacggatg
tgacgttgaccaccctgttgtacgaacacaaccgccacagcaggaccatccttcaggatctcaagcacttcaacatcttt
gactccatgctggatatttggggctcttgtctgtaccgcagctgcctgctcttgggggcctccattggggtggccaaaaa
caccagttatggtcccaaacggttgaaagggtcccggatctttatcatcttggtctgtttggcgattgggatttatgccc
tgatcaagttgcttctttattctgaagtgagaaagaccatcaaggacccttggttttggggtttgttcgcctggacctac
atctcgctggtggccactttctccttctggcagctgctctcctctgtgacccctgccagggataccttggggattaattc
agaatccagggctgaagcagaagacgttggagaccccagttctcctggggttcggggaaagaaagaggaggcctcagctg
ccaccatttgtaaactcctgtcctacaccaagccggatattcacttccttgtggtggcctttttcttcctcttactagct
gctttaggagaaaccttccttccatactacactggacaggccattgatgggatagtcatccagaagtccatggaccagtt
ttccaaggcagtggtgatcatggcgtttctagccataggaagctcatttaccgcaggtattcgaggcggcctcttcaccc
tggtgtttgctagattgaatatcaggctccgtaacagactgtttcgatcgctagtggtgcaggaaatgagtttttttgac
gaaaatctcaccggtgacatcatttcccgactgacctcagacacaaccattgtgagcgaccttgtctcccaaaacatcaa
catctttttgcgcaacctggtcaaagccaccggggtcattgttttcatgtttagtctctcgtggcagctgtccttggtga
ccttcatgggcttccctataatcatgctgatgtcagacgtttatgggaaatactataagaagctctctaaagaagtccag
aacgcattggccaaggcgaacaacaccgccgaagaaaccatctccgctatgaggacagtccgaagctttgccaacgagga
ggccgaggctgacgtctattgggagaaattgcagcaagtctacaaacttaataaaaaagaggcgatggcttacacctact
acgtgtggtcaaatggactcaccctactcatcgttcaagtgagcatcttatactatggaggccatctggtgatcactgag
caaatgacaagtggcaacttgatatccttcattatttatgaattcgtcttgggggactgcatggagtccattggttcagt
ttacagcggcctcatgcagggtgtgggagctgctgaaaaggtatttgagttcatagaccgtcagcccacgatgttaaatg
atgggattctggctcctagcgaactggaaggaaaagtggaattcaggaatgtcacttttgcttaccgcacgcgtccttcg
tcccaggttttacaggatgtctccttcactctccatcctgggaaagtaacagcgctggtgggtccttcaggcagcgggaa
gagttcctgtgtcaacatcatggagaacttctaccctcttcaacagggccaggttcttctggatggacagcctatcaatc
tgtatcaacacaagtatcttcactcggtgatctccctggtgagccaagagccggtcttgtttgcccgatctattgcgaag
aacatctcttacggtttggactcagccccatacgatttagtcgttcaagctgcccaaaatgccaatgcccacacctttat
tatggaattgcaagacggctatcacacagaagctggggagaaaggaacccaactgtccggcggtcagaagcagagagtgg
caatcgcaagagctttaatcagaaacccaccaatcctgattttggatgaggctacaagcgctttagatgcagagagtgaa
cacgcgattcagaaagctatttatggacatgtgcagaatcacacggtgctggtcatcgcccatagactgagcactgtgga
aaaggcacaccacatcattgttctcgacaagggccgtgtggtacaacaagggacgcataagcagcttatggaagaaggcg
gcctttattacaagctagtgcaaagacagattcttggccatgaaacaggcacaggggacagctgtccagtggatggtggc
ttggctaacatccagaaaggttctcccaagacaggattggcagaagagataaagaagtgacaccacaattgctgaactta
aagatgctcaactggaccgtccggctgtcaactgatcccaggagtgaatgtaacaagggttcccatcaaaccctagatgg
aagagttatcatctttcacagggcttccctagtcttccttatctgatgatggctaattaaacaatcctaagcagttgtcc
aacctgaattacgcccaggaggtagcctcctgtagatcagaaagaaaaccagatgcagttctcttaacgggctatgtgtt
cttcccactgatataccttgcaaactttgctcttaacatataaatgggcatggtttttaggggtgtgcactataaggaag
aataaagacctttgatggacctccatgttggctcaccactatgggtcaagatggaaataacatgcttgggattggcattg
aagccaaccggttgactttgggatcactctggtgcctacagatttcctttgcgcttccatgaaagttgaactggaactcc
agatctaatgcactttccatagggaggctggctcatccggaatttagaatgtcttgatagttacatgttgtagtccaggt
caatggttccctgggtatctctggtaaactgtggtactccacaagctgcatatgcatgaaggttttcttataaaaccagc
gctgtttcagttggataggggttatttctgattgctctcagaggtagtagtagtagtagcatccccgatagcattgcaat
aaaacctccagccctaacaacagaaagaacaagaggactgcacctgttgtctgcagtgcatacctgaatggcaataaagg
tggggagagagccttggttaggagaaatgggcagttttattgccattggaattatttacatttttatcgctggtatgcac
agttgcacacaatctgggttgggcacctgaatagcaagtcagctctgcaaactatttatttctcaggaacaaaggttttg
ttttcctttttttgttttgttttaatgcctaaaatcagacacatcagttttaaaataaacgcccattctgccagggaaca
tttcctgccaaattatattttaagatatagattctgctaaaaattccaaatattgagggttatagttgttttgtttagtt
aattagttaatcatcaagcatcagttttccgaattattttgatgggtttgttgtgttccaactaacaaaggagaggaaag
gaaagggggggggggaaccctcccaaatctagctgcgtaatttgacctattttgatctatgacgtttccagctggatgaa
tattagagttctcagccaaatatgtgcttaaaaaaacaaaactgaattgaagtggaacaattacctggcaacccttaatc
ttagcaattctgaaaaggtaatttgttctctctgggtagcctttccagttgcactcggttgtaaaatgactcaagcactt
tatcacattttaattactttctgatacttcgatgagcagatttttgttgtcagcagtgtttcaaaagaacatattttaca
agcacttcactaaattaaacaacaaaaaaagactacctctg
Transcript IDhabu1_s2696_g09616.t2
Definition-
>habu1_s2696_g09616.t2
tgtcctgggaagcgctcatcctccgccggccaaaggagattagcgcgtcttgctctcgtctgcaggaaaaaactgagcag
tgatgttggcgttaaccctggcctaggagcttcgtgtctcttccttcccttctgttttatgattcccacctctctacctc
attctggaaccggtttaagatgcgtgcttggacagcggtggccagcaccctcaccttcatagggacggatgtgacgttga
ccaccctgttgtacgaacacaaccgccacagcaggaccatccttcaggatctcaagcacttcaacatctttgactccatg
ctggatatttggggctcttgtctgtaccgcagctgcctgctcttgggggcctccattggggtggccaaaaacaccagtta
tggtcccaaacggttgaaagggtcccggatctttatcatcttggtctgtttggcgattgggatttatgccctgatcaagt
tgcttctttattctgaagtgagaaagaccatcaaggacccttggttttggggtttgttcgcctggacctacatctcgctg
gtggccactttctccttctggcagctgctctcctctgtgacccctgccagggataccttggggattaattcagaatccag
ggctgaagcagaagacgttggagaccccagttctcctggggttcggggaaagaaagaggaggcctcagctgccaccattt
gtaaactcctgtcctacaccaagccggatattcacttccttgtggtggcctttttcttcctcttactagctgctttagga
gaaaccttccttccatactacactggacaggccattgatgggatagtcatccagaagtccatggaccagttttccaaggc
agtggtgatcatggcgtttctagccataggaagctcatttaccgcaggtattcgaggcggcctcttcaccctggtgtttg
ctagattgaatatcaggctccgtaacagactgtttcgatcgctagtggtgcaggaaatgagtttttttgacgaaaatctc
accggtgacatcatttcccgactgacctcagacacaaccattgtgagcgaccttgtctcccaaaacatcaacatcttttt
gcgcaacctggtcaaagccaccggggtcattgttttcatgtttagtctctcgtggcagctgtccttggtgaccttcatgg
gcttccctataatcatgctgatgtcagacgtttatgggaaatactataagaagctctctaaagaagtccagaacgcattg
gccaaggcgaacaacaccgccgaagaaaccatctccgctatgaggacagtccgaagctttgccaacgaggaggccgaggc
tgacgtctattgggagaaattgcagcaagtctacaaacttaataaaaaagaggcgatggcttacacctactacgtgtggt
caaatggactcaccctactcatcgttcaagtgagcatcttatactatggaggccatctggtgatcactgagcaaatgaca
agtggcaacttgatatccttcattatttatgaattcgtcttgggggactgcatggagtccattggttcagtttacagcgg
cctcatgcagggtgtgggagctgctgaaaaggtatttgagttcatagaccgtcagcccacgatgttaaatgatgggattc
tggctcctagcgaactggaaggaaaagtggaattcaggaatgtcacttttgcttaccgcacgcgtccttcgtcccaggtt
ttacaggatgtctccttcactctccatcctgggaaagtaacagcgctggtgggtccttcaggcagcgggaagagttcctg
tgtcaacatcatggagaacttctaccctcttcaacagggccaggttcttctggatggacagcctatcaatctgtatcaac
acaagtatcttcactcggtgatctccctggtgagccaagagccggtcttgtttgcccgatctattgcgaagaacatctct
tacggtttggactcagccccatacgatttagtcgttcaagctgcccaaaatgccaatgcccacacctttattatggaatt
gcaagacggctatcacacagaagctggggagaaaggaacccaactgtccggcggtcagaagcagagagtggcaatcgcaa
gagctttaatcagaaacccaccaatcctgattttggatgaggctacaagcgctttagatgcagagagtgaacacgcgatt
cagaaagctatttatggacatgtgcagaatcacacggtgctggtcatcgcccatagactgagcactgtggaaaaggcaca
ccacatcattgttctcgacaagggccgtgtggtacaacaagggacgcataagcagcttatggaagaaggcggcctttatt
acaagctagtgcaaagacagattcttggccatgaaacaggcacaggggacagctgtccagtggatggtggcttggctaac
atccagaaaggttctcccaagacaggattggcagaagagataaagaagtgacaccacaattgctgaacttaaagatgctc
aactggaccgtccggctgtcaactgatcccaggagtgaatgtaacaagggttcccatcaaaccctagatggaagagttat
catctttcacagggcttccctagtcttccttatctgatgatggctaattaaacaatcctaagcagttgtccaacctgaat
tacgcccaggaggtagcctcctgtagatcagaaagaaaaccagatgcagttctcttaacgggctatgtgttcttcccact
gatataccttgcaaactttgctcttaacatataaatgggcatggtttttaggggtgtgcactataaggaagaataaagac
ctttgatggacctccatgt
Transcript IDhabu1_s2696_g09616.t3
Definition-
>habu1_s2696_g09616.t3
tgtcctgggaagcgctcatcctccgccggccaaaggagattagcgcgtcttgctctcgtctgcaggatttcggagccttt
acacagaatctgttgttggccctgaagttgtaatgatgatcaaagttgagccaatgttttctccagatgttaaggaaaaa
actgagcagtgatgttggcgttaaccctggcctaggagcttcgtgtctcttccttcccttctgttttatgattcccacct
ctctacctcattctggaaccggtttaagatgcgtgcttggacagcggtggccagcaccctcaccttcatagggacggatg
tgacgttgaccaccctgttgtacgaacacaaccgccacagcaggaccatccttcaggatctcaagcacttcaacatcttt
gactccatgctggatatttggggctcttgtctgtaccgcagctgcctgctcttgggggcctccattggggtggccaaaaa
caccagttatggtcccaaacggttgaaagggtcccggatctttatcatcttggtctgtttggcgattgggatttatgccc
tgatcaagttgcttctttattctgaagtgagaaagaccatcaaggacccttggttttggggtttgttcgcctggacctac
atctcgctggtggccactttctccttctggcagctgctctcctctgtgacccctgccagggataccttggggattaattc
agaatccagggctgaagcagaagacgttggagaccccagttctcctggggttcggggaaagaaagaggaggcctcagctg
ccaccatttgtaaactcctgtcctacaccaagccggatattcacttccttgtggtggcctttttcttcctcttactagct
gctttaggagaaaccttccttccatactacactggacaggccattgatgggatagtcatccagaagtccatggaccagtt
ttccaaggcagtggtgatcatggcgtttctagccataggaagctcatttaccgcaggtattcgaggcggcctcttcaccc
tggtgtttgctagattgaatatcaggctccgtaacagactgtttcgatcgctagtggtgcaggaaatgagtttttttgac
gaaaatctcaccggtgacatcatttcccgactgacctcagacacaaccattgtgagcgaccttgtctcccaaaacatcaa
catctttttgcgcaacctggtcaaagccaccggggtcattgttttcatgtttagtctctcgtggcagctgtccttggtga
ccttcatgggcttccctataatcatgctgatgtcagacgtttatgggaaatactataagaagctctctaaagaagtccag
aacgcattggccaaggcgaacaacaccgccgaagaaaccatctccgctatgaggacagtccgaagctttgccaacgagga
ggccgaggctgacgtctattgggagaaattgcagcaagtctacaaacttaataaaaaagaggcgatggcttacacctact
acgtgtggtcaaatggactcaccctactcatcgttcaagtgagcatcttatactatggaggccatctggtgatcactgag
caaatgacaagtggcaacttgatatccttcattatttatgaattcgtcttgggggactgcatggagtccattggttcagt
ttacagcggcctcatgcagggtgtgggagctgctgaaaaggtatttgagttcatagaccgtcagcccacgatgttaaatg
atgggattctggctcctagcgaactggaaggaaaagtggaattcaggaatgtcacttttgcttaccgcacgcgtccttcg
tcccaggttttacaggatgtctccttcactctccatcctgggaaagtaacagcgctggtgggtccttcaggcagcgggaa
gagttcctgtgtcaacatcatggagaacttctaccctcttcaacagggccaggttcttctggatggacagcctatcaatc
tgtatcaacacaagtatcttcactcggtgatctccctggtgagccaagagccggtcttgtttgcccgatctattgcgaag
aacatctcttacggtttggactcagccccatacgatttagtcgttcaagctgcccaaaatgccaatgcccacacctttat
tatggaattgcaagacggctatcacacagaagctggggagaaaggaacccaactgtccggcggtcagaagcagagagtgg
caatcgcaagagctttaatcagaaacccaccaatcctgattttggatgaggctacaagcgctttagatgcagagagtgaa
cacgcgattcagaaagctatttatggacatgtgcagaatcacacggtgctggtcatcgcccatagactgagcactgtgga
aaaggcacaccacatcattgttctcgacaagggccgtgtggtacaacaagggacgcataagcagcttatggaagaaggcg
gcctttattacaagctagtgcaaagacagattcttggccatgaaacaggcacaggggacagctgtccagtggatggtggc
ttggctaacatccagaaaggttctcccaagacaggattggcagaagagataaagaagtgacaccacaattgctgaactta
aagatgctcaactggaccgtccggctgtcaactgatcccaggagtgaatgtaacaagggttcccatcaaaccctagatgg
aagagttatcatctttcacagggcttccctagtcttccttatctgatgatggctaattaaacaatcctaagcagttgtcc
aacctgaattacgcccaggaggtagcctcctgtagatcagaaagaaaaccagatgcagttctcttaacgggctatgtgtt
cttcccactgatataccttgcaaactttgctcttaacatataaatgggcatggtttttaggggtgtgcactataaggaag
aataaagacctttgatggacctccatgt

Protein
Protein IDhabu1_s2696_g09616.t1
Definition-
>habu1_s2696_g09616.t1
MRAWTAVASTLTFIGTDVTLTTLLYEHNRHSRTILQDLKHFNIFDSMLDIWGSCLYRSCLLLGASIGVAKNTSYGPKRLK
GSRIFIILVCLAIGIYALIKLLLYSEVRKTIKDPWFWGLFAWTYISLVATFSFWQLLSSVTPARDTLGINSESRAEAEDV
GDPSSPGVRGKKEEASAATICKLLSYTKPDIHFLVVAFFFLLLAALGETFLPYYTGQAIDGIVIQKSMDQFSKAVVIMAF
LAIGSSFTAGIRGGLFTLVFARLNIRLRNRLFRSLVVQEMSFFDENLTGDIISRLTSDTTIVSDLVSQNINIFLRNLVKA
TGVIVFMFSLSWQLSLVTFMGFPIIMLMSDVYGKYYKKLSKEVQNALAKANNTAEETISAMRTVRSFANEEAEADVYWEK
LQQVYKLNKKEAMAYTYYVWSNGLTLLIVQVSILYYGGHLVITEQMTSGNLISFIIYEFVLGDCMESIGSVYSGLMQGVG
AAEKVFEFIDRQPTMLNDGILAPSELEGKVEFRNVTFAYRTRPSSQVLQDVSFTLHPGKVTALVGPSGSGKSSCVNIMEN
FYPLQQGQVLLDGQPINLYQHKYLHSVISLVSQEPVLFARSIAKNISYGLDSAPYDLVVQAAQNANAHTFIMELQDGYHT
EAGEKGTQLSGGQKQRVAIARALIRNPPILILDEATSALDAESEHAIQKAIYGHVQNHTVLVIAHRLSTVEKAHHIIVLD
KGRVVQQGTHKQLMEEGGLYYKLVQRQILGHETGTGDSCPVDGGLANIQKGSPKTGLAEEIKK
Protein IDhabu1_s2696_g09616.t2
Definition-
>habu1_s2696_g09616.t2
MRAWTAVASTLTFIGTDVTLTTLLYEHNRHSRTILQDLKHFNIFDSMLDIWGSCLYRSCLLLGASIGVAKNTSYGPKRLK
GSRIFIILVCLAIGIYALIKLLLYSEVRKTIKDPWFWGLFAWTYISLVATFSFWQLLSSVTPARDTLGINSESRAEAEDV
GDPSSPGVRGKKEEASAATICKLLSYTKPDIHFLVVAFFFLLLAALGETFLPYYTGQAIDGIVIQKSMDQFSKAVVIMAF
LAIGSSFTAGIRGGLFTLVFARLNIRLRNRLFRSLVVQEMSFFDENLTGDIISRLTSDTTIVSDLVSQNINIFLRNLVKA
TGVIVFMFSLSWQLSLVTFMGFPIIMLMSDVYGKYYKKLSKEVQNALAKANNTAEETISAMRTVRSFANEEAEADVYWEK
LQQVYKLNKKEAMAYTYYVWSNGLTLLIVQVSILYYGGHLVITEQMTSGNLISFIIYEFVLGDCMESIGSVYSGLMQGVG
AAEKVFEFIDRQPTMLNDGILAPSELEGKVEFRNVTFAYRTRPSSQVLQDVSFTLHPGKVTALVGPSGSGKSSCVNIMEN
FYPLQQGQVLLDGQPINLYQHKYLHSVISLVSQEPVLFARSIAKNISYGLDSAPYDLVVQAAQNANAHTFIMELQDGYHT
EAGEKGTQLSGGQKQRVAIARALIRNPPILILDEATSALDAESEHAIQKAIYGHVQNHTVLVIAHRLSTVEKAHHIIVLD
KGRVVQQGTHKQLMEEGGLYYKLVQRQILGHETGTGDSCPVDGGLANIQKGSPKTGLAEEIKK
Protein IDhabu1_s2696_g09616.t3
Definition-
>habu1_s2696_g09616.t3
MRAWTAVASTLTFIGTDVTLTTLLYEHNRHSRTILQDLKHFNIFDSMLDIWGSCLYRSCLLLGASIGVAKNTSYGPKRLK
GSRIFIILVCLAIGIYALIKLLLYSEVRKTIKDPWFWGLFAWTYISLVATFSFWQLLSSVTPARDTLGINSESRAEAEDV
GDPSSPGVRGKKEEASAATICKLLSYTKPDIHFLVVAFFFLLLAALGETFLPYYTGQAIDGIVIQKSMDQFSKAVVIMAF
LAIGSSFTAGIRGGLFTLVFARLNIRLRNRLFRSLVVQEMSFFDENLTGDIISRLTSDTTIVSDLVSQNINIFLRNLVKA
TGVIVFMFSLSWQLSLVTFMGFPIIMLMSDVYGKYYKKLSKEVQNALAKANNTAEETISAMRTVRSFANEEAEADVYWEK
LQQVYKLNKKEAMAYTYYVWSNGLTLLIVQVSILYYGGHLVITEQMTSGNLISFIIYEFVLGDCMESIGSVYSGLMQGVG
AAEKVFEFIDRQPTMLNDGILAPSELEGKVEFRNVTFAYRTRPSSQVLQDVSFTLHPGKVTALVGPSGSGKSSCVNIMEN
FYPLQQGQVLLDGQPINLYQHKYLHSVISLVSQEPVLFARSIAKNISYGLDSAPYDLVVQAAQNANAHTFIMELQDGYHT
EAGEKGTQLSGGQKQRVAIARALIRNPPILILDEATSALDAESEHAIQKAIYGHVQNHTVLVIAHRLSTVEKAHHIIVLD
KGRVVQQGTHKQLMEEGGLYYKLVQRQILGHETGTGDSCPVDGGLANIQKGSPKTGLAEEIKK

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Okinawa Institute of Science and Technology
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