Gene
| Gene Model ID | habu1_s2696_g09617 |
|---|---|
| Locus | habu1_scaffold2696 : 431899 ... 437295 : - |
| To GenomeBrowser | habu1_scaffold2696:431899..437295 |
| Genes list of scaffold | habu1_scaffold2696 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| gypsy retrotransposon integrase-like protein 1-like | GO:0003676 GO:0015074 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2696_g09617.t2 | 1 | 1 | rve | 155 | 249 | 3.3e-06 | 27.1 | 1.1e-09 | 7.8e-06 | 25.9 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.0 |
| Venom grand-1 | 2.0 |
| Pit, infrared sensing | 2.1 |
| Nose | 2.7 |
| Brain-1 | 3.0 |
| Eye | 2.1 |
| fetal fibroblast | 2.1 |
| venom gland-2 | 3.0 |
| Brain-2 | 3.7 |
| Spleen | 1.8 |
| Lung | 2.1 |
| Liver | 0.5 |
| Kidney | 1.9 |
| Pancreas | 1.2 |
| Small intestine | 1.6 |
| Large intestine | 3.0 |
| Stomach | 1.4 |
| heart | 1.5 |
| ovary | 0.4 |
| cheek muscle | 2.6 |
Transcript
| Transcript ID | habu1_s2696_g09617.t1 |
|---|---|
| Definition | - |
>habu1_s2696_g09617.t1 gtcccttaaacgaaagcaaaaccagcagggcacagctgcagttcctggataaaaggacggagcttcccagctgcagccca gcgggcttcagcccctccagcccctggcctgagaagccaggcccttgcccggttggacccttctttgcaacatggatcct gccttgcaagtggccgaggaggaggaagaggaggaggaggtggtcggcgaaggctcctgcagccccaccagcaagtttga ggatattttccgcctcctctccgaaggctgcttcccggccagcttctgctccatcaaacggaagaatctgaaacgctacg cccagaagttcattgtggaaggaggctgcctctattatgtgggccccaaaaaggaagaaaagcgggaagtggtggttgac ctcgaacgacgacggcaggtcttcctggaaagccacttcacggagctggggaatcacctggggcagaagaagacggtcca ccggattcagagccgatactattggctgggtattgtcaaggatgtggtagactggatcaagctgtgtgaaacctgccaga acgcagagcacagcaagaacctcaccaaaaaaatccggccggttaaagtggaactgccttgggaggttgtagggctggat atttatggtcctttcccggagtccagacaaggccacagtcacatccttgccgtgacggattattatacgaagtgggtgga ggctctcccgttgctgaagagagacgctttttcggtggccaaaggcttggcttccttgtattacaggtttggggcatcca ggaatatcttgtgcaatctgagctgggacttctgcgaagaggtggtcaaactcttattagagaggtggaacattactcaa agtctcaccccggccaactgcacgaacctggactgccgcaccaacgacctgctgaagtcctccatttacaacgttgtgaa cgagaagccgggcgggtgggacgaggccctggagccggttctgtttgagctccgcacgtccgccagccctgtgaccaatt acccccctttcttcctcctctacaacagatacgcctgcctgtcctccgaggctgaatataagaaggagcagggatccggg gtttttaaaagcagccgcttcccgccattcacagctgccgcccaggaacaacagaacgccgtgaaagaaattgttatcgc caacatgacggctacttacaaaggggagccgaaaagcctcaagagaaaagggaaacctctgtcctccctcacgtacaaaa tggagggcggccttttggggagaaatggggagccccccctgaaaaaattgaaaaggagccaatttgtctcgttccagatc gagacggtcttgagcccagagcagagcttatcgagtgtgaagaaaacgggatgattgatcaagagattgtgcctcttgta ggcattcacttcggccgtgtacatatctatgcgttaacaggtagtccttgacttacaaccgtcccgtttagtgaccgttt gaagtt |
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| Transcript ID | habu1_s2696_g09617.t2 |
| Definition | - |
>habu1_s2696_g09617.t2 gtcccttaaacgaaagcaaaaccagcagggcacagctgcagttcctggataaaaggacggagcttcccagctgcagccca gcgggcttcagcccctccagcccctggcctgagaagccaggcccttgcccggttggacccttctttgcaacatggatcct gccttgcaagtggccgaggaggaggaagaggaggaggaggtggtcggcgaaggctcctgcagccccaccagcaagtttga ggatattttccgcctcctctccgaaggctgcttcccggccagcttctgctccatcaaacggaagaatctgaaacgctacg cccagaagttcattgtggaaggaggctgcctctattatgtgggccccaaaaaggaagaaaagcgggaagtggtggttgac ctcgaacgacgacggcaggtcttcctggaaagccacttcacggagctggggaatcacctggggcagaagaagacggtcca ccggattcagagccgatactattggctgggtattgtcaaggatgtggtagactggatcaagctgtgtgaaacctgccaga acgcagagcacagcaagaacctcaccaaaaaaatccggccggttaaagtggaactgccttgggaggttgtagggctggat atttatggtcctttcccggagtccagacaaggccacagtcacatccttgccgtgacggattattatacgaagtgggtgga ggctctcccgttgctgaagagagacgctttttcggtggccaaaggcttggcttccttgtattacaggtttggggcatcca ggaatatcttgtgcaatctgagctgggacttctgcgaagaggtggtcaaactcttattagagaggtggaacattactcaa agtctcaccccggccaactgcacgaacctggactgccgcaccaacgacctgctgaagtcctccatttacaacgttgtgaa cgagaagccgggcgggtgggacgaggccctggagccggttctgtttgagctccgcacgtccgccagccctgtgaccaatt acccccctttcttcctcctctacaacagatacgcctgcctgtcctccgaggctgaatataagaaggagcagggatccggg gtttttaaaagcagccgcttcccgccattcacagctgccgcccaggaacaacagaacgccgtgaaagaaattgttatcgc caacatgacggctacttacaaaggggagccgaaaagcctcaagagaaaagggaaacctctgtcctccctcacgtacaaaa tggagggcggccttttggggagaaatggggagccccccctgaaaaaattgaaaaggagccaatttgtctcgttccagatc gagacggtcttgagcccagagcagagcttatcgagtgtgaagaaaacgggatgattgatcaagagattgtgcctcttgta ggcattcacttcggccgtgtacatatctatgcgttaacaggtagtccttgacttac |
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Protein
| Protein ID | habu1_s2696_g09617.t1 |
|---|---|
| Definition | - |
>habu1_s2696_g09617.t1 MDPALQVAEEEEEEEEVVGEGSCSPTSKFEDIFRLLSEGCFPASFCSIKRKNLKRYAQKFIVEGGCLYYVGPKKEEKREV VVDLERRRQVFLESHFTELGNHLGQKKTVHRIQSRYYWLGIVKDVVDWIKLCETCQNAEHSKNLTKKIRPVKVELPWEVV GLDIYGPFPESRQGHSHILAVTDYYTKWVEALPLLKRDAFSVAKGLASLYYRFGASRNILCNLSWDFCEEVVKLLLERWN ITQSLTPANCTNLDCRTNDLLKSSIYNVVNEKPGGWDEALEPVLFELRTSASPVTNYPPFFLLYNRYACLSSEAEYKKEQ GSGVFKSSRFPPFTAAAQEQQNAVKEIVIANMTATYKGEPKSLKRKGKPLSSLTYKMEGGLLGRNGEPPLKKLKRSQFVS FQIETVLSPEQSLSSVKKTG |
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| Protein ID | habu1_s2696_g09617.t2 |
| Definition | - |
>habu1_s2696_g09617.t2 MDPALQVAEEEEEEEEVVGEGSCSPTSKFEDIFRLLSEGCFPASFCSIKRKNLKRYAQKFIVEGGCLYYVGPKKEEKREV VVDLERRRQVFLESHFTELGNHLGQKKTVHRIQSRYYWLGIVKDVVDWIKLCETCQNAEHSKNLTKKIRPVKVELPWEVV GLDIYGPFPESRQGHSHILAVTDYYTKWVEALPLLKRDAFSVAKGLASLYYRFGASRNILCNLSWDFCEEVVKLLLERWN ITQSLTPANCTNLDCRTNDLLKSSIYNVVNEKPGGWDEALEPVLFELRTSASPVTNYPPFFLLYNRYACLSSEAEYKKEQ GSGVFKSSRFPPFTAAAQEQQNAVKEIVIANMTATYKGEPKSLKRKGKPLSSLTYKMEGGLLGRNGEPPLKKLKRSQFVS FQIETVLSPEQSLSSVKKTG |
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