Gene
| Gene Model ID | habu1_s2696_g09622 |
|---|---|
| Locus | habu1_scaffold2696 : 539646 ... 543675 : + |
| To GenomeBrowser | habu1_scaffold2696:539646..543675 |
| Genes list of scaffold | habu1_scaffold2696 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2696_g09622.t1 | 1 | 1 | RF-1 | 53 | 152 | 3.4e-24 | 84.8 | 2.9e-28 | 4.3e-24 | 84.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2696_g09622.t1 | gi|602654863|ref|XP_007433228.1| | PREDICTED: probable peptide chain release factor C12orf65 homolog, mitochondrial isoform X2 [Python bivittatus] | 0.0 |
| habu1_s2696_g09622.t1 | gi|602654861|ref|XP_007433227.1| | PREDICTED: probable peptide chain release factor C12orf65 homolog, mitochondrial isoform X1 [Python bivittatus] | 0.0 |
| habu1_s2696_g09622.t1 | gi|699612072|ref|XP_009873999.1| | PREDICTED: probable peptide chain release factor C12orf65 homolog, mitochondrial [Apaloderma vittatum] | 0.0 |
| habu1_s2696_g09622.t1 | gi|719774963|ref|XP_010220471.1| | PREDICTED: probable peptide chain release factor C12orf65 homolog, mitochondrial [Tinamus guttatus] | 0.0 |
| habu1_s2696_g09622.t1 | gi|637316988|ref|XP_003222789.2| | PREDICTED: probable peptide chain release factor C12orf65 homolog, mitochondrial [Anolis carolinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 14.9 |
| Venom grand-1 | 24.9 |
| Pit, infrared sensing | 15.5 |
| Nose | 11.6 |
| Brain-1 | 6.2 |
| Eye | 16.9 |
| fetal fibroblast | 16.9 |
| venom gland-2 | 21.6 |
| Brain-2 | 5.6 |
| Spleen | 13.1 |
| Lung | 12.4 |
| Liver | 23.5 |
| Kidney | 17.7 |
| Pancreas | 30.5 |
| Small intestine | 20.2 |
| Large intestine | 12.4 |
| Stomach | 13.8 |
| heart | 14.3 |
| ovary | 54.0 |
| cheek muscle | 25.2 |
Transcript
| Transcript ID | habu1_s2696_g09622.t1 |
|---|---|
| Definition | - |
>habu1_s2696_g09622.t1 gttaccccgaaggtaagtttgggtgccctccgcagtgagagcttggccgtcccgagaaaagtatctccctatccggcgct cccttccctccgatctagaatccgctcgtgtccatttaccactttcccttcgaccttatctcgcaatcccaaggccacaa caaccctacaagcattacagcgggcctgctctgatttgtaactggagagaagagagagacacacacacaccccaaaagga gggggctaccctgcacagcccagatccaaaaggggaaaaaatgaagaacattagaagcctgatctgaactgcagatctgc cagcgggtgtcgtgtgaaggcaaccgaagcaaacacgagggtttgccaacccagctactacagctagaaaagtctcctcc ggttcgtttagatgcctccctcaaatttattactcttcactgcatctttgatccaacggagaaccttcccgtggacacca aggcttggagacgaacgtctcttgctgcgccagttccttggaccgtacgtccttgaagcagggaagaagagctgcagcga gctgcttcctctcaacgaagctgagttggaagaacagtttgtccggggcttcgggcccggaggccaagccacaaacaaaa ccaacaactgcgtggttctgaagcatcttccttcggggattgtcgtcaagtgccatcagacccggtccctcgagaccaac cggtcaaaagccagagagatccttcaggagaaagtggacgttttctacaagggcgactccagcgctgtgcttcaggagaa acgggagttgcacaaaaaaaaggaagagaagaaacgagaagccaagaaaaacctggaaaggaagcggcacttgaaagaaa tgcaggccctggaagacaaataggaacagaaaagtctcggctatcattgtttaaaatacgggatctactctaaccaatgt acatttctgatttaaaaaaaaaactgtgattcagcagaaaacaatacagtacaatcaatgcttgaattat |
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Protein
| Protein ID | habu1_s2696_g09622.t1 |
|---|---|
| Definition | - |
>habu1_s2696_g09622.t1 MPPSNLLLFTASLIQRRTFPWTPRLGDERLLLRQFLGPYVLEAGKKSCSELLPLNEAELEEQFVRGFGPGGQATNKTNNC VVLKHLPSGIVVKCHQTRSLETNRSKAREILQEKVDVFYKGDSSAVLQEKRELHKKKEEKKREAKKNLERKRHLKEMQAL EDK |
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