Gene
| Gene Model ID | habu1_s2696_g09623 |
|---|---|
| Locus | habu1_scaffold2696 : 544577 ... 574695 : - |
| To GenomeBrowser | habu1_scaffold2696:544577..574695 |
| Genes list of scaffold | habu1_scaffold2696 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein strawberry notch homolog 1 | GO:0006355 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2696_g09623.t1 | 2 | 1 | AAA_34 | 217 | 265 | 0.0 | 236.5 | 5.5e-15 | 1.6e-11 | 43.5 |
| habu1_s2696_g09623.t1 | 2 | 2 | AAA_34 | 266 | 393 | 0.0 | 236.5 | 0.0 | 0.0 | 191.9 |
| habu1_s2696_g09623.t1 | 2 | 1 | Helicase_C_4 | 703 | 847 | 0.0 | 327.5 | 0.0 | 0.0 | 243.7 |
| habu1_s2696_g09623.t1 | 2 | 2 | Helicase_C_4 | 846 | 953 | 0.0 | 327.5 | 9.1e-27 | 2.7e-23 | 82.7 |
| habu1_s2696_g09623.t1 | 1 | 1 | CDK2AP | 1101 | 1194 | 3.8e-34 | 118.6 | 1.3e-37 | 3.8e-34 | 118.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2696_g09623.t1 | gi|564255427|ref|XP_006266687.1| | PREDICTED: protein strawberry notch homolog 1 [Alligator mississippiensis] | 0.0 |
| habu1_s2696_g09623.t1 | gi|327276121|ref|XP_003222819.1| | PREDICTED: protein strawberry notch homolog 1 [Anolis carolinensis] | 0.0 |
| habu1_s2696_g09623.t1 | gi|704317106|ref|XP_010167841.1| | PREDICTED: protein strawberry notch homolog 1 isoform X2 [Caprimulgus carolinensis] | 0.0 |
| habu1_s2696_g09623.t1 | gi|704317103|ref|XP_010167840.1| | PREDICTED: protein strawberry notch homolog 1 isoform X1 [Caprimulgus carolinensis] | 0.0 |
| habu1_s2696_g09623.t1 | gi|723127857|ref|XP_010280155.1| | PREDICTED: protein strawberry notch homolog 1 [Phaethon lepturus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 13.1 |
| Venom grand-1 | 9.0 |
| Pit, infrared sensing | 11.0 |
| Nose | 11.8 |
| Brain-1 | 11.9 |
| Eye | 10.4 |
| fetal fibroblast | 24.9 |
| venom gland-2 | 13.3 |
| Brain-2 | 11.9 |
| Spleen | 6.3 |
| Lung | 12.0 |
| Liver | 10.2 |
| Kidney | 12.0 |
| Pancreas | 5.3 |
| Small intestine | 11.7 |
| Large intestine | 8.3 |
| Stomach | 6.5 |
| heart | 9.7 |
| ovary | 24.7 |
| cheek muscle | 17.8 |
Transcript
| Transcript ID | habu1_s2696_g09623.t1 |
|---|---|
| Definition | - |
>habu1_s2696_g09623.t1 ggcgacggccgcggggaggaagcagcggcggcggctgcggcgagggcggaggaagaagaagaggaggaggggaacggcga cgaggaaggttctcgacggcgtcctcccgacacggccagaaaatggtggaaccaggacaagatcttttgcttacagcttt aagtgaaagtggaattagcccaaatgacttgtttgatatcgattctccagatatgggcctcgcaactccacctccagcta ttcagcagcaaccaccctccaccacaacctttgtcctgaatcaaatcaaccagctcccaaccctggggacgaccatcgtc atgacaaagacaacccctgtgaccagtaccaggcagaccatcaccgtggcaaagattatacaaaccagcaccaacacccg gccctcggtgacagtgccggtggcacggaacaccctcaccaccccggtgcccaaggaccagatccagctgaaagatctcc tcaaaaacaacagtcttaatgaactgatgaaactgaagcccccatccaacatcgctccgcctgtggcaactgcagcaacc gatctgagcaatggtgctgttaaaaaggagacttcgactaaagaagtcacaagaatatgggtaaatgatctgaaaatgag gagcttctctcccaccatgaaagtgcccgtcacgaaagaggaagaagaacccgaggaagaggatgaagaagaaatgggcc acgcagagacatacgccgaatatatgcccataaaattaaaaatcggcttgcgccatcccgacccggtagtagaaacaagc tccctttccagcgtgacccctcctgaagtatggtacaaatcttcgattccggaggagagcattgacagcggttggctgtc agccttgcagcttgaagcaattacttacgcagcacagatagtgtttgacgaatgccacaaggctaaaaacctttgcccag ttggctcttcaaaaccaactaagacaggcttggctgttctggagctgcagaacaagcttccaaaggccagagttacttat gctagtgccacaggtgcatcagagccccggaacatggcatatatgaaccgccttgggatttggggggaagggaccccatt tagggaattcagcgattttatccaagcagttgaaagaagaggtgtgggcgccatggaaatagttgctatggatatgaagc taagaggaatgtacatagcccggcagctgagcttctcaggggtcaccttcaaaatagacgaagttcatctttctcagcac tacatcaaaatgtataataaatctgtgaaaatgtgggtaagtgccagggagaaattccaacaggccgctgacctcattga cgccgaacagcgcatgaagaagtccatgtggggccagttctggtctgctcaccagagattttttaaatacctctgcattg catccaaagtcaaaagagtggtgcagctggcccgggaagagatcaagaacggcaagtgcgtggtcattgggctgcagtcc acaggagaagccagaaccttagaagctttggaagaaggtggcggggaactgaatgactttgtctccacagcgaagggggt gtttcagtccctcattgagaaacatttcccagctcctgaccggaagaagctttttagtttgctgggaattgacctgtctg tccagagtaacaacagctctcctcgagacagtccttgcaaggaggataaagtaaaaaaacgcaaaggggaagaaataacg agagagatcaagaaagcccgtaagaccggcggtctcgccgggagcagctctgacgaaagcttcagcgagtcggaggcctc ggagaacgaagagagcgacaacgagagttcccggtttttaagttctggagatgatgacgacttcaacccctttagagatg aatctagtgaagatgatgaggatgacccttggctaatccggaaagaacacaagaaaaataaagagaagaaaaagaagaaa agcatagaccccgattctattcagagtgccttgttagcatctggtctcggatccaaaaggccaagttcgctctcctccac agtcgtgaccccttctacaaatatctctgcaccaaacaccaacaccaacaccagctatgtgacgagtcaggatgctgtgg aaagggcccagcagatgaaaagagaattgctggataaactggagaagctatccgaggatctccctcctaacacactggac gagctcatagatgaactgggaggtcctgagaacgtggccgagatgacaggtcgcaaaggaagagtcgtgagcaacgacga tggcagcatttcgtacgagtccaggtccgaacttgacgttccggtggaaatcctgaatattactgagaagcagagattca tggatggagataagaatatcgccatcatctctgaagccgcgagctcaggcatatctttgcaagcagatcgaagggccaaa aatcagagaaggagggtacatatgacgctggagttgccgtggagtgccgatcgggcaattcagcagtttggacgaactca ccggtccaatcaagtgactgccccagagtacgtcttcctaatttctgaattggcaggagaacagagattcgcctcgattg ttgccaaacggctggagagcttgtatgggcgaaatgccttggaaatagtcatgaagtccattgtgaatttggattccccg ttagtctctccgccagcagattatccaggagagttttttaaagatgttagacaaggtttgataggcgtcggcctaattaa tgtcgaagaccggtctgggattctcactcttgacaaagattataacaatattgggaaattcctgaaccggattctgggca tggaagtccaccaacagaacgctctcttccagtatttctcagacacactaaacggcgtcatccagaatgcgaagaagaac gggagatacgacatgggcatattaggtaaggcggcgttttcagggtggaccgtacagatacgaaatagtaagaaaactgc catcctcatgaaagaggtgaaccccaaaaagaagcttttcctggtccataggccaaataccggaaaacagttgaaactgg aaacctatgcggaaataaagaaaaaatataaaaaagtatcctctgacgacgctgtgactcactgggtcgaacaatacacc tcatcggcagacacatgcacacatgcttactggagaggcaactgcaaaaaggcaggtcttggtcttgtttgcgaggttgg cttgcgctgccggacctattacgtcctctgcggttctgtcctgagcgtttggacaaaagtggaaggggtcctggcctcaa ggaagctcgggctgccggaggctatgtcctactacgtgtttgagggccaaggagcagctcattccccttctactagcatg gctggctcggggcagtaccgacacctgattaatgactacggacccccctctctgggctacacgcaaggagggcagatcac tggcagcaatcaagtccctcagagcaaatacgcagaactgctgaccatcattgaagaattaggaaaagaaattagaccga cctatgccggaagtaaaagtgccatggaaaggctaaaacgaggtatcatccatgccagaggattggtacgggaatgttta gcagagactgagagaaatgcaagatcctaagatccggctccccccccccttcggtccctgcctccaagagaccccctttc cctctggaaacatgcagagccacccttcaaactgtcctcttcctagttttggatattgtccttttcaagaatggatctgc atgtccggttgaattccagctcccgttcagaggtttctttcagtcatctcacaaacaacttttgacccttgctttcagca ggcagccagcctggatcgatccatgcaaagccaccccttggatgaatggaaattgttggggtttttttcctttctccacc caaattctgctcctaatcgggaacaggctttgcctgtttcctgtttaagacatcatctgcacccaacctctcctctcgac ttctgcagtcgctctccagactcgcatcctcttaagatcgttttccagtctgcattcagggccggtggagggatccccgg cagctttccagaggtccctcgctgaaataaagctggacagatttccctaatag |
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Protein
| Protein ID | habu1_s2696_g09623.t1 |
|---|---|
| Definition | - |
>habu1_s2696_g09623.t1 MVEPGQDLLLTALSESGISPNDLFDIDSPDMGLATPPPAIQQQPPSTTTFVLNQINQLPTLGTTIVMTKTTPVTSTRQTI TVAKIIQTSTNTRPSVTVPVARNTLTTPVPKDQIQLKDLLKNNSLNELMKLKPPSNIAPPVATAATDLSNGAVKKETSTK EVTRIWVNDLKMRSFSPTMKVPVTKEEEEPEEEDEEEMGHAETYAEYMPIKLKIGLRHPDPVVETSSLSSVTPPEVWYKS SIPEESIDSGWLSALQLEAITYAAQIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKARVTYASATGASEPRNMAY MNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFSGVTFKIDEVHLSQHYIKMYNKSVKMWVS AREKFQQAADLIDAEQRMKKSMWGQFWSAHQRFFKYLCIASKVKRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEEGG GELNDFVSTAKGVFQSLIEKHFPAPDRKKLFSLLGIDLSVQSNNSSPRDSPCKEDKVKKRKGEEITREIKKARKTGGLAG SSSDESFSESEASENEESDNESSRFLSSGDDDDFNPFRDESSEDDEDDPWLIRKEHKKNKEKKKKKSIDPDSIQSALLAS GLGSKRPSSLSSTVVTPSTNISAPNTNTNTSYVTSQDAVERAQQMKRELLDKLEKLSEDLPPNTLDELIDELGGPENVAE MTGRKGRVVSNDDGSISYESRSELDVPVEILNITEKQRFMDGDKNIAIISEAASSGISLQADRRAKNQRRRVHMTLELPW SADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLYGRNALEIVMKSIVNLDSPLVSPPADYPGEFFK DVRQGLIGVGLINVEDRSGILTLDKDYNNIGKFLNRILGMEVHQQNALFQYFSDTLNGVIQNAKKNGRYDMGILGKAAFS GWTVQIRNSKKTAILMKEVNPKKKLFLVHRPNTGKQLKLETYAEIKKKYKKVSSDDAVTHWVEQYTSSADTCTHAYWRGN CKKAGLGLVCEVGLRCRTYYVLCGSVLSVWTKVEGVLASRKLGLPEAMSYYVFEGQGAAHSPSTSMAGSGQYRHLINDYG PPSLGYTQGGQITGSNQVPQSKYAELLTIIEELGKEIRPTYAGSKSAMERLKRGIIHARGLVRECLAETERNARS |
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