Gene
| Gene Model ID | habu1_s2696_g09627 |
|---|---|
| Locus | habu1_scaffold2696 : 600119 ... 630415 : - |
| To GenomeBrowser | habu1_scaffold2696:600119..630415 |
| Genes list of scaffold | habu1_scaffold2696 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dna polymerase epsilon catalytic subunit a | EC:2.7.7.7 GO:0000082 GO:0000166 GO:0000731 GO:0000785 GO:0003677 GO:0003682 GO:0003887 GO:0005737 GO:0005886 GO:0006260 GO:0006287 GO:0006297 GO:0008270 GO:0008622 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2696_g09627.t1 | 1 | 1 | DNA_pol_B_exo1 | 94 | 433 | 0.0 | 260.7 | 0.0 | 0.0 | 259.2 |
| habu1_s2696_g09627.t1 | 1 | 1 | RNase_H_2 | 341 | 443 | 7.2e-07 | 29.1 | 5.3e-09 | 1.1e-05 | 25.2 |
| habu1_s2696_g09627.t1 | 1 | 1 | DNA_pol_B_exo2 | 345 | 481 | 1.3e-08 | 34.6 | 2.0e-11 | 4.2e-08 | 32.9 |
| habu1_s2696_g09627.t1 | 1 | 1 | DNA_pol_B | 631 | 1152 | 3.0e-21 | 75.7 | 1.9e-23 | 4.0e-20 | 72.0 |
| habu1_s2696_g09627.t1 | 1 | 1 | DUF1744 | 1536 | 1934 | 0.0 | 474.4 | 0.0 | 0.0 | 473.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2696_g09627.t1 | gi|602666992|ref|XP_007439063.1| | PREDICTED: DNA polymerase epsilon catalytic subunit A [Python bivittatus] | 0.0 |
| habu1_s2696_g09627.t1 | gi|530564497|ref|XP_005278826.1| | PREDICTED: DNA polymerase epsilon catalytic subunit A [Chrysemys picta bellii] | 0.0 |
| habu1_s2696_g09627.t1 | gi|557323215|ref|XP_006034675.1| | PREDICTED: DNA polymerase epsilon catalytic subunit A [Alligator sinensis] | 0.0 |
| habu1_s2696_g09627.t1 | gi|637349302|ref|XP_003226860.2| | PREDICTED: DNA polymerase epsilon catalytic subunit A [Anolis carolinensis] | 0.0 |
| habu1_s2696_g09627.t1 | gi|733912568|ref|XP_010718801.1| | PREDICTED: DNA polymerase epsilon catalytic subunit A [Meleagris gallopavo] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.1 |
| Venom grand-1 | 0.5 |
| Pit, infrared sensing | 1.9 |
| Nose | 1.8 |
| Brain-1 | 0.8 |
| Eye | 0.8 |
| fetal fibroblast | 11.1 |
| venom gland-2 | 0.9 |
| Brain-2 | 0.6 |
| Spleen | 1.2 |
| Lung | 0.5 |
| Liver | 0.2 |
| Kidney | 0.2 |
| Pancreas | 0.3 |
| Small intestine | 0.5 |
| Large intestine | 0.6 |
| Stomach | 0.2 |
| heart | 0.2 |
| ovary | 5.6 |
| cheek muscle | 0.5 |
Transcript
| Transcript ID | habu1_s2696_g09627.t1 |
|---|---|
| Definition | - |
>habu1_s2696_g09627.t1 ggaaatgcggccgggagacagccgggttgccggccaggatggcgctgaggaagggcagcggcggcggcgggtggcggcgc cggtgggctgcggagcccgcggcgggagatggcgagaaggagaccccgcgggatgaaggcgcctcgctttctgctctccg gcgtttagagcgcagccagtggacggacaaaattgatgcgcggtttgggttcgagagaatcaaagaacctgcagaaagga caggatggctgatcaacatgcacccgacggagattttggatgaggataaacgcttggtcagtgccgtggattattatttc attcaggaggatggaagtagatttaaggtggctttgccctacagaccatacttctacattgcagcccagaagggttgtga ccgagaagtatcgtccttcctttccaagaaattccagggaaaaatagccaaattggaaattgtactcaaagaggatctgg acttgcccaatcacctggttggcctgaaacggagttatatcaagctttctttcaacacagtagatgacctgataaaagtg cgcagggagattacccctgctgtcaagaagaatagagaacgggaccaagctttggacacttacaccaccctgctgactag tgctctcactgggcacagtctgacccacgaggaggagccctcaaagaagactgcagaccagatggacaacatcatagaca tgcgggagtacgacgtgccctaccatatccgcctgtccattgatctgaagattcacgtggctcactggtacatcgttcac caccggggcagcagtttccctcctgagattattcggcgagatgacatggtagaacggcctgatcctgttgttcttgcctt tgacatcgagactacaaaactccctttaaaatttcctgatgcagaaacagaccagatcatgatgatctcctacatgattg atggccagggatacttgatcacaaaccgggagattgtttccgaagacattgaagattttgaatttactcccaaaccagag tatgagggtccgttctgtgtattcaacgaacctgatgaggctcatcttatccagcggtggtttgaacatgttcaagaaac caagccaacgatcatggtgacctacaacggagacttctttgactggccttttgtggaagccagagcagcgatccatggga tgaatatgcagcaggagattgggttccaaaaggacagccagggagaatacaaatcctcgcagtgcatccacatggattgt ctccggtgggtgaagagagacagttaccttccagtgggcagccacaacttaaaagcagcagccaaagcgaagttgggtta cgatcctgtagagctggatcctgaagacatgtgccggatggcaacggaagagcctcagactttggccacctattcagtgt cagatgctgttgccacctattacatgtacatgaagtatgtccatcctttcatcttcgccttgtgcactatcattccgatg gagcccgacgaggtcctccggaaaggctcaggaaccttgtgtgaggcgctactcatggtccaagcctatcacgccaacat tgtcttccccaacaagcaagagcaggagttcaacaagcttacagaggacgggcacgtgctcgactcggagacgtacatcg ggggccacgtggaggccctggagtctggggtctttcgcagcgatatcccctgccgctttaaaatgaaccctgccgccttt gacttgctcctgcagcgtgtggagaagacgctttgccatgccgttgaggaagaggaggggatccctttagagcaggtcac caatttccaagaggtttgtgaagagatcaaagtgaaactgaattccctgaaggacgttcccaacagaattgaatgtcccc tcatttaccatctggatgtgggggccatgtacccaaacatcatcttgaccaacaggctgcagccctcggctatagtggac gaggcaacctgtgctgcttgtgacttcaacaagccaggggccagctgtcagcggaaaatgacttggcaatggaggggaga attcatgccagcaagccggagcgagttccaccgcatccagcaacagctggagtcggagaagtttcctgctcttttcccag atgggcctccccgggcctttcacaagctctctcgagaagatcaagccaaatacgaaaagaagcgcttggctgattattgt cgcaaagcttacaagaagatccacgtgacgaaagtggaggagcgggtcactactatttgtcagcgagaaaactccttcta cgtggatactgtccgggcttttcgagaccgtcgctatgagtttaaaggattacataaggtatggaaaaagaagttggcag ctgccactgaaatgggtgatgcctccgaagcgaagcgctgcaagaacatggagattttgtacgattccctgcagctggca cacaagtgcatcctcaactccttttacggctacgtcatgcggaaaggggcccgctggtattccatggaaatggctggcat cgtctgcttcactggggccaatatcattactcaggccagagagctgattgagcagatcgggagacccttggagcttgaca cagacgggatatggtgcgtgcttccaaatagctttccagagaactttgtcatcaagtcaacccactccaagaaacccaag gtgaccatttcctatccaggggctatgctgaacatcatggtgaaggagggttttacaaacaatcagtaccaggagctggt ggacccagcatccctcaagtatgtatcccgctcagagaacagcatcttttttgaagtagatggtccctatctggctatga tcctcccagcctccaaggaggagggcaagaagctaaagaaaagatacgccgtgttcaatgaagacggttccctggccgag ctgaagggctttgaggtgaagcggcgaggagagctgcagctggtgaagatcttccagtcctcggtcttcgaggccttcct gaagggcaccacgctggaggaggtctacgcttcggtcgccaaagtagccgattactggctggatgtgctgcacagcaagg cagccaacatgcccgattctgagctgtttgagttgatctcggagaatagatccatgtctcggaagctggaggactacgga gagcaaaaatccacgtccatcagcaccgccaagcgcttggctgagtttcttggggaccagatggtgaaggacgccggcct gagctgtcggtttatcatctcaaagaaaccagaaggctccccggttactgagagagccatcccacttgccatcttccagg ccgagctctccgtgcgcaagcattacctccggaagtggctaaaaagtccttcgctgcaggattttgacatccgaatgatc ctagactgggagtattacattgaaagactgggcagcacaatccagaagattgtcaccatcccagcagcactgcagcaggt gaagaatccggtcccccgtgtccgtcatccggattggctccacaagaagctgctggagaaaaatgatgtcttcaagcaga aaaaaatcagcgagctctttgccagtgaaggcagaagacaggtctccactaacgtagccagggaggataccccaaatagt caggtgaccgacatggaagattttggggtcaccaaacctctgcagccagcgccccctatatcaagcaagcgtaaacgaat ccccacagcagaggagagccagccccagtcccaagctctggagctcacccaatcgtggagggagatcctgggaaccccac cgcccatcggcaccactaaagaggaacgcctgctgtggctccgctaccataagaaaaagtgggagcttcaggctcgtcag cgccaggagcgccggaagaagcggaggctggccgatggagaagccgtcctggggggcggagtgattcgagctgggccctc caaagggctgagcaattacctgcgcaagaccgcccggagtatccttgacatgccctggcagatagtacagattgctgaga ctggccagccaggcctcttcaagctatgggctgtgattgggagtgatctctattgcctcaagctgaatgtcccacgtatc ttctatatcaaccagcgtgttcctaaacctgaagagagcacggtctatagaaaggtgaatcgaattcttccccgttccag cttggccttcaacctgtatgagtactcggtgcctgaagatatgtacctggagcgcatcaatgagatcaatgccagcctct ctgctccagacattgagggggtttatgagacccaggtgccattactcctccgggccctggttcacctgggctgcgtctgc atggtgaataagcatttggtgaggcacctgagtggccgggaagccgagacatttgacctggagcacctggagaggaagtc tctggcacagttcagctacctggagcccgggagcatccggcacatctacctctaccaccactcccagggcagcaaggcct tgctgggcctcttcatcccctcccagcgcaaagcctccatttttgtgctcgacacagtgcgcagtaaccagatgcccaac ctcggcaccatgtattctgctgagcatgcttccatggtggagaagataggccaagagctgctccctccggccaagcacat ctttgaagttcgagccgaaacggatctcaagagcatctgcagagcgctccagcgccttctgatgagctacaaggatgagc gcaggggccccaccctcatcgctgtgcagtctaactgggatctgaagaggctggtcagtgggatgccggtcctggaggag ttcccgctggtccctatgcacgtggcagatgacatcagctacagcatattggactggcagcgccacggggcccggcactt gatccgccgctacctcaagttggacatgtgtctgtctcaggcctttgacatgagcaggtactatcacctccccattggga accttccagacgacatctccatcttcggcacggatctctttctctctcggcatctccatcgccacaaccacctcctctgg ctctctcccacctcccgcccggacttggggggcaaggaggccgacgatagccgcctagtcatggagttcgatgaaaggga ctctgtcgagatcaaccacccaggctgttattcaacagtgtgtgtggagctggacctccagaacctggccgtcaacacca tcctgcagtcccaccgcatcaacgacatggagggggcctccagcatgtgcatcagcttcgatgtcatccagcaggcctcc ctggaggacatggtcgtgggcaaccaggcggccagcgtccccgccagctacgatgaggccgccctctgctccaacacgtt caggatcttgaaaagcctggtggtgggctgggtgaaggagatcacgcagtaccacaacgtctacgcggacaatcaggtga tccacttctaccgctggctgcgctctccaaactccctgctctacgatcccgccctgcaccggacactccacagcatgatg aagaagctctttctgcagttggtggcagaattcaagcgcctcggctccttggtcatttacgccaatttcaaccggatcgt tctgtgcaccaagaagcgccatatcgaagatgccctggcctacgtcgagtatatcaccaacagcatccattcaaaagagc tcttccactcactggctatttccttttcctgctgctgggagtttctgctgtggatggaccccagcaatcacggtgggatc aagggcaaagtgccgtcccagacccactgcgaagaggcaaggaggagtaaacagacagcagaggtagccaacaatgaaga agaggaggaagaggaagaggaagaacaagaagacgacttgggagaaaacggtatagagaatcgcctggaaaacaactgga acatcatgcagtatttaccacaagccgcttcctgtcagaattacttccttatgattgtgtcggcgtacatcgttgctgtt caccacagcctgaaggaggaaatgcagcgggacgtctccggaggcagccctgtcaggagacgagccagcagccaaatctc ccaggaggctctcggggaaacgggcaccatgccaggcgccattgctttctcgcaggagtatgtctccaacgagctcaccc agagcttcttcaccatcactcagaagatccaaaagaaggtcaccggctctcgccacgccacagagccctcggagatgttt ccatccctgcccggctcgcacctgacgctcaacaaccctgccctggagttcatcaaacacgtctgccaggtgctgtctct ggatgccaacatcgccaaccaggtgcagaagctgaagcgggacctgctccgtctcattgacgtgggcgaattctccgagg acgcccacttccgggacccctgctgctcctacgtcctcccggaggtgatctgcagaaactgcaacttttgcagagacctg gacctctgcaaggaccctgcgctctttcaggagggctccctgccgcccagctggctgtgctccaattgccagtctcagta cgactccgatgccatcgaggtggctctggtggaagccctgcagaagaagttgatggccttcaccttgcaagatctggtgt gcttgaagtgcaaaggcatcaaggatactcacatgcccgtgtactgcagttgtgctgggaactttgacctcctcctgccc accaagagcttcctggatcatctgaaggttttccagggcatcgctcggcattacggaatggcccacttgctggagaatgt tcagtggctgcttcaaatgaaccctcagcttctctcctgagaggacacacacacacaccgtcctttcgggccgaaacaac acccaaatatgcacaggtctccttctcgtcctggctgtgaagtcctaaggagagaactgcttgtataggcagctggcaaa ggaaggcttcgccctgggagcagaagttgcaggccttaaggttgtcccatcttgcgtggaaacctcaagaggagaattaa ggccttgtggcgtctcttgtaagaatgaggctcacatgtctcatgaaactcagcagggaaataatgcaaggagcctctgg gtgatccttgtcccccctcccccccttttttacagacccggaacaaactttggattatgggggcatttttctgcccagat tttatgctgtttttattttgacttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctttttccttc caaccagcttttaccaatatatttaataaatagagttcaaccagcctagatc |
|
Protein
| Protein ID | habu1_s2696_g09627.t1 |
|---|---|
| Definition | - |
>habu1_s2696_g09627.t1 MALRKGSGGGGWRRRWAAEPAAGDGEKETPRDEGASLSALRRLERSQWTDKIDARFGFERIKEPAERTGWLINMHPTEIL DEDKRLVSAVDYYFIQEDGSRFKVALPYRPYFYIAAQKGCDREVSSFLSKKFQGKIAKLEIVLKEDLDLPNHLVGLKRSY IKLSFNTVDDLIKVRREITPAVKKNRERDQALDTYTTLLTSALTGHSLTHEEEPSKKTADQMDNIIDMREYDVPYHIRLS IDLKIHVAHWYIVHHRGSSFPPEIIRRDDMVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMIDGQGYLITNREIV SEDIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAIHGMNMQQEIGFQKDS QGEYKSSQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEEPQTLATYSVSDAVATYYMYMKY VHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIVFPNKQEQEFNKLTEDGHVLDSETYIGGHVEALESGVFR SDIPCRFKMNPAAFDLLLQRVEKTLCHAVEEEEGIPLEQVTNFQEVCEEIKVKLNSLKDVPNRIECPLIYHLDVGAMYPN IILTNRLQPSAIVDEATCAACDFNKPGASCQRKMTWQWRGEFMPASRSEFHRIQQQLESEKFPALFPDGPPRAFHKLSRE DQAKYEKKRLADYCRKAYKKIHVTKVEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLAAATEMGDASEAKR CKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFP ENFVIKSTHSKKPKVTISYPGAMLNIMVKEGFTNNQYQELVDPASLKYVSRSENSIFFEVDGPYLAMILPASKEEGKKLK KRYAVFNEDGSLAELKGFEVKRRGELQLVKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLHSKAANMPDSELFELI SENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRFIISKKPEGSPVTERAIPLAIFQAELSVRKHYLRKW LKSPSLQDFDIRMILDWEYYIERLGSTIQKIVTIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVFKQKKISELFASEGRR QVSTNVAREDTPNSQVTDMEDFGVTKPLQPAPPISSKRKRIPTAEESQPQSQALELTQSWREILGTPPPIGTTKEERLLW LRYHKKKWELQARQRQERRKKRRLADGEAVLGGGVIRAGPSKGLSNYLRKTARSILDMPWQIVQIAETGQPGLFKLWAVI GSDLYCLKLNVPRIFYINQRVPKPEESTVYRKVNRILPRSSLAFNLYEYSVPEDMYLERINEINASLSAPDIEGVYETQV PLLLRALVHLGCVCMVNKHLVRHLSGREAETFDLEHLERKSLAQFSYLEPGSIRHIYLYHHSQGSKALLGLFIPSQRKAS IFVLDTVRSNQMPNLGTMYSAEHASMVEKIGQELLPPAKHIFEVRAETDLKSICRALQRLLMSYKDERRGPTLIAVQSNW DLKRLVSGMPVLEEFPLVPMHVADDISYSILDWQRHGARHLIRRYLKLDMCLSQAFDMSRYYHLPIGNLPDDISIFGTDL FLSRHLHRHNHLLWLSPTSRPDLGGKEADDSRLVMEFDERDSVEINHPGCYSTVCVELDLQNLAVNTILQSHRINDMEGA SSMCISFDVIQQASLEDMVVGNQAASVPASYDEAALCSNTFRILKSLVVGWVKEITQYHNVYADNQVIHFYRWLRSPNSL LYDPALHRTLHSMMKKLFLQLVAEFKRLGSLVIYANFNRIVLCTKKRHIEDALAYVEYITNSIHSKELFHSLAISFSCCW EFLLWMDPSNHGGIKGKVPSQTHCEEARRSKQTAEVANNEEEEEEEEEEQEDDLGENGIENRLENNWNIMQYLPQAASCQ NYFLMIVSAYIVAVHHSLKEEMQRDVSGGSPVRRRASSQISQEALGETGTMPGAIAFSQEYVSNELTQSFFTITQKIQKK VTGSRHATEPSEMFPSLPGSHLTLNNPALEFIKHVCQVLSLDANIANQVQKLKRDLLRLIDVGEFSEDAHFRDPCCSYVL PEVICRNCNFCRDLDLCKDPALFQEGSLPPSWLCSNCQSQYDSDAIEVALVEALQKKLMAFTLQDLVCLKCKGIKDTHMP VYCSCAGNFDLLLPTKSFLDHLKVFQGIARHYGMAHLLENVQWLLQMNPQLLS |
|