Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s2696_g09628
Locus habu1_scaffold2696 : 632526 ... 641999 : +
To GenomeBrowser habu1_scaffold2696:632526..641999
Genes list of scaffold habu1_scaffold2696

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s2696_g09628.t4 1 1 CCDC92 6 43 2.9e-16 58.7 6.5e-19 6.9e-16 57.5

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 5.6
Venom grand-1 3.8
Pit, infrared sensing 5.6
Nose 12.1
Brain-1 18.4
Eye 9.9
fetal fibroblast 10.5
venom gland-2 1.2
Brain-2 24.5
Spleen 3.6
Lung 7.3
Liver 2.1
Kidney 8.9
Pancreas 4.4
Small intestine 1.1
Large intestine 4.2
Stomach 5.6
heart 6.3
ovary 22.3
cheek muscle 15.0

Transcript
Transcript IDhabu1_s2696_g09628.t1
Definition-
>habu1_s2696_g09628.t1
atcggtggcggcggatttgctggatgccaggatggcagcactgaacctggagaaccagctgcacagcgcccaaaagaatc
tgctttttctccagaggcagcacgcagataccctcaaggggctgcacgccgagatccgccgcctgcagcaacactgcaca
gatctgacctacgagttgactctcaaaagttcagacttgacagaaaatgggatttcgaggagcgaagagctcagaaggaa
atgcgaagagctggaggcccagcttaaagcgaaggagatggaaaacaatgaattattaaaagagctcgagcaaaagaacg
ccatgatcgcggtgctcgagaacacgatcaaggagcgggagaagaaatacttggaagaattaaagatgaaaagccataaa
ttaaacatgctctccagcgaactggagcagcgggccagcaccattgcctacctaacctcccagctccacgccacgaagaa
aaaactcatgagctccagcgggacgtcggacagctctccgtccggaagccccgtgctctccggctacaaacccgctcctc
ccaaagagaagcttccagaaactccgcggcgcaggatgaagaagagcctgtccacgccgctcaaccccgaattcgaggag
gcctaccgattaggctctgagagccgcaagctgctgctgcgggagccggtcgacgccatgcctgaccccacgcccttttt
actggccagagaatccacggagctgcaccttctgaaagagaggcctttagtcatcccccccatcccgtccgagcgcgctt
cggccgagccccacagcccggcccgggagaggcagcacaagagccacgtgggggtggcgcaccgcatccatcacgtccca
cctccccagccccaccagccgcccgaggtggagacgctggccgtggaccaggtgaacggaagcaaagtggttcggaagca
ttcggggacagatcggactgtttgaaccgggcgcttgggaggggaccctcggcggtcagcagacggtcaggctgcacctc
cctcccctcttccgagcgcctccccccttgtgcatgccaaaatctttccagaactagagttaacttcttcctcacttgtt
cctattgcagagttatctacctaatgaaatgctgtagccaaacccaggtgcgtctgcctgaattgcttgcttccaatgct
ccttcatttattcggggcgcgccgacgggcccaggcccggggcttccagagccttgccgcgctgtgtatcggctcttaac
agtaaagccttccctctgtctgtctgtc
Transcript IDhabu1_s2696_g09628.t2
Definition-
>habu1_s2696_g09628.t2
tgttaaccactggagggaaaatgtgaactgcgccggattggtttggctgctaagtcttagcaatgtgctggaaccggatt
tgctggatgccaggatggcagcactgaacctggagaaccagctgcacagcgcccaaaagaatctgctttttctccagagg
cagcacgcagataccctcaaggggctgcacgccgagatccgccgcctgcagcaacactgcacagatctgacctacgagtt
gactctcaaaagttcagacttgacagaaaatgggatttcgaggagcgaagagctcagaaggaaatgcgaagagctggagg
cccagcttaaagcgaaggagatggaaaacaatgaattattaaaagagctcgagcaaaagaacgccatgatcgcggtgctc
gagaacacgatcaaggagcgggagaagaaatacttggaagaattaaagatgaaaagccataaattaaacatgctctccag
cgaactggagcagcgggccagcaccattgcctacctaacctcccagctccacgccacgaagaaaaaactcatgagctcca
gcgggacgtcggacagctctccgtccggaagccccgtgctctccggctacaaacccgctcctcccaaagagaagcttcca
gaaactccgcggcgcaggatgaagaagagcctgtccacgccgctcaaccccgaattcgaggaggcctaccgattaggctc
tgagagccgcaagctgctgctgcgggagccggtcgacgccatgcctgaccccacgccctttttactggccagagaatcca
cggagctgcaccttctgaaagagaggcctttagtcatcccccccatcccgtccgagcgcgcttcggccgagccccacagc
ccggcccgggagaggcagcacaagagccacgtgggggtggcgcaccgcatccatcacgtcccacctccccagccccacca
gccgcccgaggtggagacgctggccgtggaccaggtgaacggaagcaaagtggttcggaagcattcggggacagatcgga
ctgtttgaaccgggcgcttgggaggggaccctcggcggtcagcagacggtcaggctgcacctccctcccctcttccgagc
gcctccccccttgtgcatgccaaaatctttccagaactagagttaacttcttcctcacttgttcctattgcagagttatc
tacctaatgaaatgctgtagccaaacccaggtgcgtctgcctgaattgcttgcttccaatgctccttcatttattcgggg
cgcgccgacgggcccaggcccggggcttccagagccttgccgcgctgtgtatcggctcttaacagtaaagccttccctct
gtctgtctgtc
Transcript IDhabu1_s2696_g09628.t3
Definition-
>habu1_s2696_g09628.t3
gcctcccatcctcgggctttcctgggagtgtaaatcgggagcagggatttttgagaatgcttgtgtaaggggatttgctg
gatgccaggatggcagcactgaacctggagaaccagctgcacagcgcccaaaagaatctgctttttctccagaggcagca
cgcagataccctcaaggggctgcacgccgagatccgccgcctgcagcaacactgcacagatctgacctacgagttgactc
tcaaaagttcagacttgacagaaaatgggatttcgaggagcgaagagctcagaaggaaatgcgaagagctggaggcccag
cttaaagcgaaggagatggaaaacaatgaattattaaaagagctcgagcaaaagaacgccatgatcgcggtgctcgagaa
cacgatcaaggagcgggagaagaaatacttggaagaattaaagatgaaaagccataaattaaacatgctctccagcgaac
tggagcagcgggccagcaccattgcctacctaacctcccagctccacgccacgaagaaaaaactcatgagctccagcggg
acgtcggacagctctccgtccggaagccccgtgctctccggctacaaacccgctcctcccaaagagaagcttccagaaac
tccgcggcgcaggatgaagaagagcctgtccacgccgctcaaccccgaattcgaggaggcctaccgattaggctctgaga
gccgcaagctgctgctgcgggagccggtcgacgccatgcctgaccccacgccctttttactggccagagaatccacggag
ctgcaccttctgaaagagaggcctttagtcatcccccccatcccgtccgagcgcgcttcggccgagccccacagcccggc
ccgggagaggcagcacaagagccacgtgggggtggcgcaccgcatccatcacgtcccacctccccagccccaccagccgc
ccgaggtggagacgctggccgtggaccaggtgaacggaagcaaagtggttcggaagcattcggggacagatcggactgtt
tgaaccgggcgcttgggaggggaccctcggcggtcagcagacggtcaggctgcacctccctcccctcttccgagcgcctc
cccccttgtgcatgccaaaatctttccagaactagagttaacttcttcctcacttgttcctattgcagagttatctacct
aatgaaatgctgtagccaaacccaggtgcgtctgcctgaattgcttgcttccaatgctccttcatttattcggggcgcgc
cgacgggcccaggcccggggcttccagagccttgccgcgctgtgtatcggctcttaacagtaaagccttccctctgtctg
tctgtc
Transcript IDhabu1_s2696_g09628.t4
Definition-
>habu1_s2696_g09628.t4
gcctcccatcctcgggctttcctgggagtgtaaatcgggagcagggatttttgagaatgcttgtgtaaggggatttgctg
gatgccaggatggcagcactgaacctggagaaccagctgcacagcgcccaaaagaatctgctttttctccagaggcagca
cgcagataccctcaaggggctgcacgccgagatccgccgcctgcagcaacactgcacagctgatgtacccaggtttgtgg
gcagagggagctcatattggctgctgatagcatttacagataaggagataaaagtgtcctatctgacctacgagttgact
ctcaaaagttcagacttgacagaaaatgggatttcgaggagcgaagagctcagaaggaaatgcgaagagctggaggccca
gcttaaagcgaaggagatggaaaacaatgaattattaaaagagctcgagcaaaagaacgccatgatcgcggtgctcgaga
acacgatcaaggagcgggagaagaaatacttggaagaattaaagatgaaaagccataaattaaacatgctctccagcgaa
ctggagcagcgggccagcaccattgcctacctaacctcccagctccacgccacgaagaaaaaactcatgagctccagcgg
gacgtcggacagctctccgtccggaagccccgtgctctccggctacaaacccgctcctcccaaagagaagcttccagaaa
ctccgcggcgcaggatgaagaagagcctgtccacgccgctcaaccccgaattcgaggaggcctaccgattaggctctgag
agccgcaagctgctgctgcgggagccggtcgacgccatgcctgaccccacgccctttttactggccagagaatccacgga
gctgcaccttctgaaagagaggcctttagtcatcccccccatcccgtccgagcgcgcttcggccgagccccacagcccgg
cccgggagaggcagcacaagagccacgtgggggtggcgcaccgcatccatcacgtcccacctccccagccccaccagccg
cccgaggtggagacgctggccgtggaccaggtgaacggaagcaaagtggttcggaagcattcggggacagatcggactgt
ttgaaccgggcgcttgggaggggaccctcggcggtcagcagacggtcaggctgcacctccctcccctcttccgagcgcct
ccccccttgtgcatgccaaaatctttccagaactagagttaacttcttcctcacttgttcctattgcagagttatctacc
taatgaaatgctgtagccaaacccaggtgcgtctgcctgaattgcttgcttccaatgctccttcatttattcggggcgcg
ccgacgggcccaggcccggggcttccagagccttgccgcgctgtgtatcggctcttaacagtaaagccttccctctgtct
gtctgtc

Protein
Protein IDhabu1_s2696_g09628.t1
Definition-
>habu1_s2696_g09628.t1
MAALNLENQLHSAQKNLLFLQRQHADTLKGLHAEIRRLQQHCTDLTYELTLKSSDLTENGISRSEELRRKCEELEAQLKA
KEMENNELLKELEQKNAMIAVLENTIKEREKKYLEELKMKSHKLNMLSSELEQRASTIAYLTSQLHATKKKLMSSSGTSD
SSPSGSPVLSGYKPAPPKEKLPETPRRRMKKSLSTPLNPEFEEAYRLGSESRKLLLREPVDAMPDPTPFLLARESTELHL
LKERPLVIPPIPSERASAEPHSPARERQHKSHVGVAHRIHHVPPPQPHQPPEVETLAVDQVNGSKVVRKHSGTDRTV
Protein IDhabu1_s2696_g09628.t2
Definition-
>habu1_s2696_g09628.t2
MAALNLENQLHSAQKNLLFLQRQHADTLKGLHAEIRRLQQHCTDLTYELTLKSSDLTENGISRSEELRRKCEELEAQLKA
KEMENNELLKELEQKNAMIAVLENTIKEREKKYLEELKMKSHKLNMLSSELEQRASTIAYLTSQLHATKKKLMSSSGTSD
SSPSGSPVLSGYKPAPPKEKLPETPRRRMKKSLSTPLNPEFEEAYRLGSESRKLLLREPVDAMPDPTPFLLARESTELHL
LKERPLVIPPIPSERASAEPHSPARERQHKSHVGVAHRIHHVPPPQPHQPPEVETLAVDQVNGSKVVRKHSGTDRTV
Protein IDhabu1_s2696_g09628.t3
Definition-
>habu1_s2696_g09628.t3
MAALNLENQLHSAQKNLLFLQRQHADTLKGLHAEIRRLQQHCTDLTYELTLKSSDLTENGISRSEELRRKCEELEAQLKA
KEMENNELLKELEQKNAMIAVLENTIKEREKKYLEELKMKSHKLNMLSSELEQRASTIAYLTSQLHATKKKLMSSSGTSD
SSPSGSPVLSGYKPAPPKEKLPETPRRRMKKSLSTPLNPEFEEAYRLGSESRKLLLREPVDAMPDPTPFLLARESTELHL
LKERPLVIPPIPSERASAEPHSPARERQHKSHVGVAHRIHHVPPPQPHQPPEVETLAVDQVNGSKVVRKHSGTDRTV
Protein IDhabu1_s2696_g09628.t4
Definition-
>habu1_s2696_g09628.t4
MAALNLENQLHSAQKNLLFLQRQHADTLKGLHAEIRRLQQHCTADVPRFVGRGSSYWLLIAFTDKEIKVSYLTYELTLKS
SDLTENGISRSEELRRKCEELEAQLKAKEMENNELLKELEQKNAMIAVLENTIKEREKKYLEELKMKSHKLNMLSSELEQ
RASTIAYLTSQLHATKKKLMSSSGTSDSSPSGSPVLSGYKPAPPKEKLPETPRRRMKKSLSTPLNPEFEEAYRLGSESRK
LLLREPVDAMPDPTPFLLARESTELHLLKERPLVIPPIPSERASAEPHSPARERQHKSHVGVAHRIHHVPPPQPHQPPEV
ETLAVDQVNGSKVVRKHSGTDRTV

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