Gene
| Gene Model ID | habu1_s2696_g09634 |
|---|---|
| Locus | habu1_scaffold2696 : 719836 ... 724131 : + |
| To GenomeBrowser | habu1_scaffold2696:719836..724131 |
| Genes list of scaffold | habu1_scaffold2696 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| translation initiation factor eif-2b subunit alpha | GO:0003743 GO:0005085 GO:0005840 GO:0005851 GO:0005886 GO:0006446 GO:0014003 GO:0043547 GO:0051716 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2696_g09634.t1 | 1 | 1 | IF-2B | 17 | 290 | 0.0 | 268.3 | 0.0 | 0.0 | 268.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2696_g09634.t1 | gi|602635708|ref|XP_007424716.1| | PREDICTED: translation initiation factor eIF-2B subunit alpha isoform X1 [Python bivittatus] | 0.0 |
| habu1_s2696_g09634.t1 | gi|637316720|ref|XP_008111891.1| | PREDICTED: translation initiation factor eIF-2B subunit alpha [Anolis carolinensis] | 0.0 |
| habu1_s2696_g09634.t1 | gi|530618118|ref|XP_005298781.1| | PREDICTED: translation initiation factor eIF-2B subunit alpha [Chrysemys picta bellii] | 0.0 |
| habu1_s2696_g09634.t1 | gi|591366952|ref|XP_007058328.1| | PREDICTED: translation initiation factor eIF-2B subunit alpha [Chelonia mydas] | 0.0 |
| habu1_s2696_g09634.t1 | gi|586469658|ref|XP_006865429.1| | PREDICTED: translation initiation factor eIF-2B subunit alpha [Chrysochloris asiatica] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 8.2 |
| Venom grand-1 | 34.0 |
| Pit, infrared sensing | 13.8 |
| Nose | 12.0 |
| Brain-1 | 7.9 |
| Eye | 9.9 |
| fetal fibroblast | 20.1 |
| venom gland-2 | 39.4 |
| Brain-2 | 8.7 |
| Spleen | 9.0 |
| Lung | 8.8 |
| Liver | 13.6 |
| Kidney | 13.2 |
| Pancreas | 14.0 |
| Small intestine | 10.2 |
| Large intestine | 9.7 |
| Stomach | 12.9 |
| heart | 11.6 |
| ovary | 28.5 |
| cheek muscle | 17.6 |
Transcript
| Transcript ID | habu1_s2696_g09634.t1 |
|---|---|
| Definition | - |
>habu1_s2696_g09634.t1 ggtcgcccgaagcgttttctttctccaccatgaacgaggcggagctagtcgatgcttttaacacccagatgagacaggat ccagatgttgcctctgcagtggctgccatccgggtcttattggaattcttgaagagggacaaaggtgagaccatccaagg actgagagccaatctaaaacaggctatagaaacactctctagcgtcgactcctcggtggccatttcctctggaggagagc ttttcttaagattcatcagtctcacttctttagaaaacccggactattccaaatgcaaagaaatcatgatcgaaagaggg gaggtttttcttaagcgaatctctctttccaggaagaaaatcgccacgctttgtcacacgtttgtgaaagatggtggcat aatattgacacacgcttactcaaaagtggtacttcgagtcttagcagcagctatacaggccaagaaacgttttagcgtct atgtcacggaatcacagccggatcgagcagggcagaagatggcagaagccctcaagaatcttggaattcctgccaccata attctagatgctgctgttggatacatcatggaaaggatagatttggtgattgtgggggctgaaggagtggtcgaaaacgg agggatcatcaacaagattgggaccaaccaaatggccgtctgtgccaaagcgcagaacaaacctttttacgtagtcgccg agagtttcaagtttgtaaggctcttccctctgaaccagcaggacgtcccggataaatttaagtacaaagcagataccctg aagacccaaaaggccctggtggttgagcatccttggatcgattacacctccccgtctctgatcacgctgctgtttacgga tctcggggtcttgaccccttcggctgtgagcgacgaactgattaaactctacttgtaaagggcctccctgaacctgtgga ttgcaagcagttaatgcaaaataaccagggaactttttcctggtcgttttgccccctttgttttgcggatttttatttta tttttttaaaaaattcatctgtacaaaaaaaaaaaaaagctcactgtgccgaccgtaatgtaaattattggaataaattc gctcgaagaaaaaccaagg |
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Protein
| Protein ID | habu1_s2696_g09634.t1 |
|---|---|
| Definition | - |
>habu1_s2696_g09634.t1 MNEAELVDAFNTQMRQDPDVASAVAAIRVLLEFLKRDKGETIQGLRANLKQAIETLSSVDSSVAISSGGELFLRFISLTS LENPDYSKCKEIMIERGEVFLKRISLSRKKIATLCHTFVKDGGIILTHAYSKVVLRVLAAAIQAKKRFSVYVTESQPDRA GQKMAEALKNLGIPATIILDAAVGYIMERIDLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVVAESFKFVRLFP LNQQDVPDKFKYKADTLKTQKALVVEHPWIDYTSPSLITLLFTDLGVLTPSAVSDELIKLYL |
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