Gene
| Gene Model ID | habu1_s2696_g09636 |
|---|---|
| Locus | habu1_scaffold2696 : 734240 ... 739865 : - |
| To GenomeBrowser | habu1_scaffold2696:734240..739865 |
| Genes list of scaffold | habu1_scaffold2696 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2696_g09636.t1 | 2 | 1 | EMP24_GP25L | 36 | 104 | 8.8e-27 | 94.0 | 3.9e-17 | 5.8e-13 | 48.9 |
| habu1_s2696_g09636.t1 | 2 | 2 | EMP24_GP25L | 112 | 148 | 8.8e-27 | 94.0 | 1.2e-14 | 1.8e-10 | 40.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2696_g09636.t1 | gi|637316732|ref|XP_003222786.2| | PREDICTED: transmembrane emp24 domain-containing protein 2 isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s2696_g09636.t1 | gi|637316728|ref|XP_008111893.1| | PREDICTED: transmembrane emp24 domain-containing protein 2 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s2696_g09636.t1 | gi|564255395|ref|XP_006266671.1| | PREDICTED: transmembrane emp24 domain-containing protein 2 [Alligator mississippiensis] | 0.0 |
| habu1_s2696_g09636.t1 | gi|557258970|ref|XP_006015176.1| | PREDICTED: transmembrane emp24 domain-containing protein 2-like [Alligator sinensis] | 0.0 |
| habu1_s2696_g09636.t1 | gi|530618112|ref|XP_005298778.1| | PREDICTED: transmembrane emp24 domain-containing protein 2 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 29.0 |
| Venom grand-1 | 121.7 |
| Pit, infrared sensing | 32.0 |
| Nose | 53.4 |
| Brain-1 | 12.4 |
| Eye | 39.4 |
| fetal fibroblast | 72.9 |
| venom gland-2 | 338.8 |
| Brain-2 | 10.9 |
| Spleen | 67.3 |
| Lung | 27.3 |
| Liver | 56.6 |
| Kidney | 58.3 |
| Pancreas | 189.6 |
| Small intestine | 42.0 |
| Large intestine | 22.3 |
| Stomach | 35.0 |
| heart | 16.3 |
| ovary | 32.8 |
| cheek muscle | 52.0 |
Transcript
| Transcript ID | habu1_s2696_g09636.t1 |
|---|---|
| Definition | - |
>habu1_s2696_g09636.t1 gtccctcacgtggcccgcctcgctcgctccccccccgccgccatgtcgccggtgcgggccgtgctggcgctgctggccgc gctctgggccccggcggccggctacttcgtcagcatcgacgcgcacgccgaggaatgcttcctcgagcgggtcccgtcag gcaccaagatggggctcatcttcgagatcacgggccctgataacaagggcattcacaaaggcgacagagaatccagtgga aaatacacctttgcagcccacatggacggaacgtacaagttctgcttcagcaacaaaatgtccaccatgactcccaagat agtgatgttcactattgacattggggaagctcccaagggacaggacatggagacagaagttaacgacaacacaaatagca gagtagtcctctggtcgttcttcgaagcccttgtactagttgccatgacactgggacagatctactatctgaagaggttt tttgaagtccggagagtggtttaatcaaacttggctcccagccccctttctggtgatcccagactctgttcactctttta ccaaacacaatttcgttgcaaaaatcacgtagttttctttatccctgcatcccgaactataaagctttttaagtttaagg tcttc |
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Protein
| Protein ID | habu1_s2696_g09636.t1 |
|---|---|
| Definition | - |
>habu1_s2696_g09636.t1 MSPVRAVLALLAALWAPAAGYFVSIDAHAEECFLERVPSGTKMGLIFEITGPDNKGIHKGDRESSGKYTFAAHMDGTYKF CFSNKMSTMTPKIVMFTIDIGEAPKGQDMETEVNDNTNSRVVLWSFFEALVLVAMTLGQIYYLKRFFEVRRVV |
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