Gene
| Gene Model ID | habu1_s2696_g09638 |
|---|---|
| Locus | habu1_scaffold2696 : 754548 ... 756715 : - |
| To GenomeBrowser | habu1_scaffold2696:754548..756715 |
| Genes list of scaffold | habu1_scaffold2696 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| u11 u12 small nuclear ribonucleoprotein 35 kda protein | GO:0000166 GO:0003676 GO:0019013 GO:0030529 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2696_g09638.t1 | 1 | 1 | RRM_1 | 53 | 122 | 1.2e-17 | 63.3 | 5.2e-21 | 1.9e-17 | 62.6 |
| habu1_s2696_g09638.t1 | 1 | 1 | RRM_6 | 53 | 122 | 4.6e-12 | 45.7 | 1.9e-15 | 7.0e-12 | 45.1 |
| habu1_s2696_g09638.t1 | 1 | 1 | RRM_5 | 67 | 126 | 2.2e-07 | 30.5 | 8.8e-11 | 3.3e-07 | 30.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2696_g09638.t1 | gi|602635704|ref|XP_007424714.1| | PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform X1 [Python bivittatus] | 0.0 |
| habu1_s2696_g09638.t1 | gi|690436254|ref|XP_009319443.1| | PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein, partial [Pygoscelis adeliae] | 0.0 |
| habu1_s2696_g09638.t1 | gi|558119275|ref|XP_006113778.1| | PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Pelodiscus sinensis] | 0.0 |
| habu1_s2696_g09638.t1 | gi|541957725|ref|XP_005434619.1| | PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Falco cherrug] | 0.0 |
| habu1_s2696_g09638.t1 | gi|543714232|ref|XP_005498410.1| | PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Columba livia] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.8 |
| Venom grand-1 | 9.8 |
| Pit, infrared sensing | 7.1 |
| Nose | 6.1 |
| Brain-1 | 6.2 |
| Eye | 6.7 |
| fetal fibroblast | 11.8 |
| venom gland-2 | 12.1 |
| Brain-2 | 7.7 |
| Spleen | 7.2 |
| Lung | 8.1 |
| Liver | 10.8 |
| Kidney | 9.1 |
| Pancreas | 7.3 |
| Small intestine | 5.8 |
| Large intestine | 7.4 |
| Stomach | 7.3 |
| heart | 11.7 |
| ovary | 33.6 |
| cheek muscle | 24.3 |
Transcript
| Transcript ID | habu1_s2696_g09638.t1 |
|---|---|
| Definition | - |
>habu1_s2696_g09638.t1 ccatagtgctctttgagcttggtggttttcttgcagacgtttcattattcaactagctatgaacgagtgggtgcccatcg ctaaagagtacgacccactgaaagccggaagcatcgatggcaccgacgaagagcctcacgaccgggcggtctggagagcc atgtcggcccgctacgtccccaacaaagatgtttccggagacccccacctaaccctcttcgtcgcccggctcaacctaca aaccacggaagagaagttaagagaggtcttctcccggtacggagagattcggaaaatccgtctggttcgggacctggttt ccggtttttccaaaggctacgctttcattgagtataaagaggaacgggcgctcctgaaagcccaccgcgatgccaacaag ctgatcattgaccagcgggaaatctttgtcgactttgagctggaaaggagtctcaaaggttggatccctcgccggctggg aggcgggtttggcggcaaaaaggagtcgggtcagctgcggttcggaggccgagacagacccttcaggaagcccatcaact tgcctgccatgaaaaatgatttttatagtagtgaaggatctgcgggaaagagagagcgggcttggtcccggggagggccg agggactggaagactggagaacgagattacgaaaggagccgagagtcccggcgaggtgaacgggaaagatcgtggggata cggcaagagcgaaagagacctggaacatcgagggagggaagaccgaggcagagccccagaggggagggagcgagagagga aagaccggaatcgcgaggccaaggagagcaaggggtgaaggctgccactgatgggaccatttccttcaaatgctgctcga ttgaaggagatcctcagaagtgtagatctgacttccaagacaagccggatggctgtctggatcagctcagacattgtggg tgggagcagcatcttcccagctggagaagagtgaaaattgtaccaagggctcccatcccttgacagttgtgtccatgtct tattccaggatctgctggacgatggatcccaaattcccaacaatgacattatctcctgatacatttgaagtgccaaaaag gagagagctggtttaggattcccacccccgttccacaccctttaattcttgaaaagatctgggttaatgtaaggccttaa ttccgccagtagacacctccatcaaggcagaagggtagctatcaccctaaaaaatgaggtagggttgaattgtatatatg ggatttgagggacttcaaccaaacgctgtttacgagtcagtgaaatcacccagaggcctcttgttaattcagaaatagtt tatttagcatattaaaaagagttctacagttcgatattgttctctctactagtcccagccaatccttgtttattgccttt aactatctaacaccctgaatcttgaataaaaattaagaatctctttgcatat |
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Protein
| Protein ID | habu1_s2696_g09638.t1 |
|---|---|
| Definition | - |
>habu1_s2696_g09638.t1 MNEWVPIAKEYDPLKAGSIDGTDEEPHDRAVWRAMSARYVPNKDVSGDPHLTLFVARLNLQTTEEKLREVFSRYGEIRKI RLVRDLVSGFSKGYAFIEYKEERALLKAHRDANKLIIDQREIFVDFELERSLKGWIPRRLGGGFGGKKESGQLRFGGRDR PFRKPINLPAMKNDFYSSEGSAGKRERAWSRGGPRDWKTGERDYERSRESRRGERERSWGYGKSERDLEHRGREDRGRAP EGRERERKDRNREAKESKG |
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