Gene
| Gene Model ID | habu1_s2696_g09643 |
|---|---|
| Locus | habu1_scaffold2696 : 807769 ... 838235 : - |
| To GenomeBrowser | habu1_scaffold2696:807769..838235 |
| Genes list of scaffold | habu1_scaffold2696 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2696_g09643.t1 | 3 | 1 | Smoothelin | 7 | 41 | 6.4e-39 | 131.6 | 2.8e-12 | 8.3e-09 | 35.1 |
| habu1_s2696_g09643.t1 | 3 | 2 | Smoothelin | 72 | 124 | 6.4e-39 | 131.6 | 4.3e-16 | 1.3e-12 | 47.3 |
| habu1_s2696_g09643.t1 | 3 | 3 | Smoothelin | 596 | 647 | 6.4e-39 | 131.6 | 3.3e-20 | 9.9e-17 | 60.5 |
| habu1_s2696_g09643.t1 | 1 | 1 | CH | 810 | 876 | 8.7e-16 | 57.9 | 6.6e-16 | 2.0e-12 | 47.1 |
| habu1_s2696_g09643.t1 | 1 | 1 | CAMSAP_CH | 822 | 872 | 2.9e-07 | 30.0 | 2.7e-10 | 7.9e-07 | 28.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2696_g09643.t1 | gi|641775344|ref|XP_008171099.1| | PREDICTED: smoothelin isoform X2 [Chrysemys picta bellii] | 0.0 |
| habu1_s2696_g09643.t1 | gi|637349285|ref|XP_008118006.1| | PREDICTED: LOW QUALITY PROTEIN: smoothelin [Anolis carolinensis] | 0.0 |
| habu1_s2696_g09643.t1 | gi|641775342|ref|XP_008171098.1| | PREDICTED: smoothelin isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s2696_g09643.t1 | gi|557323211|ref|XP_006034673.1| | PREDICTED: smoothelin isoform X1 [Alligator sinensis] | 0.0 |
| habu1_s2696_g09643.t1 | gi|591373489|ref|XP_007061441.1| | PREDICTED: LOW QUALITY PROTEIN: smoothelin [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.3 |
| Venom grand-1 | 3.5 |
| Pit, infrared sensing | 7.4 |
| Nose | 4.2 |
| Brain-1 | 2.8 |
| Eye | 6.3 |
| fetal fibroblast | 18.3 |
| venom gland-2 | 3.6 |
| Brain-2 | 2.9 |
| Spleen | 3.8 |
| Lung | 28.4 |
| Liver | 5.8 |
| Kidney | 3.2 |
| Pancreas | 1.6 |
| Small intestine | 15.8 |
| Large intestine | 63.9 |
| Stomach | 23.5 |
| heart | 4.9 |
| ovary | 2.9 |
| cheek muscle | 3.5 |
Transcript
| Transcript ID | habu1_s2696_g09643.t1 |
|---|---|
| Definition | - |
>habu1_s2696_g09643.t1 tgtgcggtggatggctctgcgcggccgggggagagctccatccgttctgatcctgaactagcccctggcctttggaggga cttcccttcctttctctgcctggccggcttctttggagagaaggaggggggcccctgagggctgaatctggcagcatgtc cgaagaggcgctcctgagcatggatgaagggacgctccggaaactgctggaggccaccctggacttgacggagcgcaggc agatccgctcggccatccgggagctgcgccggcaggagctggagcgggacgaggaggcgctggcatccaagcgcttccgg acggagcggcaggagaacaaggagaaccggctgaggtcctggcagcgagaggaagagcagcgacagcagaagtctctgga caccctttcgagaaagctggagaccatccaggatgtggaggagctgaccggcttgctgcgaggaaccagtgagtacgagg aacgcaaactcatccgggctgctatccgcaagttgcgcgcagaagaaattgaagctgcaacgttggcggggaaagcgttc aataaccggagggccgccgacacagttcgagcatccaaggagcaagacgaacacgctgcaggggacagaaacacgcaggt gcagaagcgagccgggcaggagctggtccaaagccagatgcaggagcaactggatcccaaggcggctgaagccccagggt cttctttggggactgttctgctcctggaagccgtccccagccactcgccttcccggtcagctcctttcccagacgatgag gccggcggtgaagaccctgggcccaactcccaggacgaggaggccggccccgaactgcagccctcctcccgggaggaaga ggaagaggaggaagctgaaggcctggcaccccccaaaggcgaggaggggccgagctcctccggaggagaagcctcctctc aaaccaggaaagaggagcagctggaggacgaaagcgctgggggggaagcccccccaaaaaaggagtctctcctgagccag aatagagaggttgtgtctcaagccccagaagaaggagaaggcgctgcaggccaggagggagatagagacgcctctttagc aactgccctgcacggagccccccaaaaggtagaaacggacagctgcaaagctcccccaaaaccacccggtgcagagccgt gccgggagcagcccttccagagagccggctccatctgggagcgcgctcgccagtttggctccggcaccccaaaccctccg gctgcgccccagaagggagagaaggccggcagagggctgcccgtcctgccacggcagcattttttaccctcccagcctgc ggccaacttacccttgggggaccgtggcggcgacgctggcattcggacgctccaggctggcagcacggggcaggatgcag cccggaccggcccttctcaggacaaggctggggcgggcaggcccgcttcgcaagctccggccgtccctaaagaggcaggc ggccctcaggggcggggccagggcagccaatggcaggagaggaagctgccccccgcccggcccggtgttgaaaacgccaa ggggggctccgtggactcagaggtgctctgtagccagcaaagtggctctgcccacagcccagcagactccctggttctcc gtccagctgctgcccacccggacgacgagatgaagaccctcctcaccattgagatcaaggacagccgcactcagcctctg cggggccacctggcgggacccccagggaaccagcgggcagagctgaccctgggactgcggaactccccgctgcgcatcac ctcctccagccatggcagctccagcagcagctttgcaaagatggaagcggagttgccgaggcagcccaaggcaggcctgc tgaccaggacggagaaggggaaggcgcaggaagagcagaaggcagaccgactgagcgccgaagcgctgagcaaaatcgag gaagaagacgtcttggataagatgctggaccagacaagagactttgaggagcgacggctgatccgggcagccatgcggga tctgcgccagcggaagcgagaccagcgggaaaaggagcggaaccagcggctgcaggagtccaaagcgaaggggggctctc acaccaccgagaccacctcccagcagagcagcacatcggcggacggctcggccgtcagcacggtcaccaagacccagcgc ctcgtgcagtccaatgatggcagcaaagcatcccgcacaatcacaatggaggcaagctacacgaagagatcaggaaaaga gggcaacacctttgtgcagaccaagtcctacagctcgtcgtcttccaagaaagtgggcagcatcttcgagcgggaggatc cgagccccaggtccgggagcagtctagctgacttggagcggcgccaagcggagaggaagaaggagatcatgaaggcccag gccatgcccaagatgtcagcctcgcaggcgcgcaaggccatgatcgagaagctggagaaggagggcgggagcttcggggt ccccaatgccaacaccatcaagcagatgcttctggattggtgccgcgccaagacccggggctacgagcacgtggacatcc agaatttctcctccagctggagcgatgggatggccttctgcgcgctcgtccacaactttttccccgaggccttcgattac acgcagctctcgccccaggaccggcggcataacttcgagaaggccttctccgcagccgatgcttcgtcctttcagctcgg gcctccccaggccttcctcatccttccctcacgcagcggagttctatcgctgcctagttcagaaggggctggtcaagacg aaaaagtcttaactttcctttctgcggcgctacggaggctggtggactgcgtcccgctggtggacgtagaggatatgatg atcatggggaaacgcccggatgccaaatgtgttttcacctacgtccagtccctctacaaccacctgcgacgtcacgagct tcagcgacggcagtcacacctgtagcctcctcctcttctgacggacccccacccccaaaaggccgggtgggtaggctggg gggggcagcttcccccacgctccccacctcctctcttgcctgcagagatcaggcgaggccgcccccccagcccggaaaag aaaccaggaggctgccgctctgcaccacacatgcttttataccaaggttgttttgattgttgcttgtaagtt |
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Protein
| Protein ID | habu1_s2696_g09643.t1 |
|---|---|
| Definition | - |
>habu1_s2696_g09643.t1 MSEEALLSMDEGTLRKLLEATLDLTERRQIRSAIRELRRQELERDEEALASKRFRTERQENKENRLRSWQREEEQRQQKS LDTLSRKLETIQDVEELTGLLRGTSEYEERKLIRAAIRKLRAEEIEAATLAGKAFNNRRAADTVRASKEQDEHAAGDRNT QVQKRAGQELVQSQMQEQLDPKAAEAPGSSLGTVLLLEAVPSHSPSRSAPFPDDEAGGEDPGPNSQDEEAGPELQPSSRE EEEEEEAEGLAPPKGEEGPSSSGGEASSQTRKEEQLEDESAGGEAPPKKESLLSQNREVVSQAPEEGEGAAGQEGDRDAS LATALHGAPQKVETDSCKAPPKPPGAEPCREQPFQRAGSIWERARQFGSGTPNPPAAPQKGEKAGRGLPVLPRQHFLPSQ PAANLPLGDRGGDAGIRTLQAGSTGQDAARTGPSQDKAGAGRPASQAPAVPKEAGGPQGRGQGSQWQERKLPPARPGVEN AKGGSVDSEVLCSQQSGSAHSPADSLVLRPAAAHPDDEMKTLLTIEIKDSRTQPLRGHLAGPPGNQRAELTLGLRNSPLR ITSSSHGSSSSSFAKMEAELPRQPKAGLLTRTEKGKAQEEQKADRLSAEALSKIEEEDVLDKMLDQTRDFEERRLIRAAM RDLRQRKRDQREKERNQRLQESKAKGGSHTTETTSQQSSTSADGSAVSTVTKTQRLVQSNDGSKASRTITMEASYTKRSG KEGNTFVQTKSYSSSSSKKVGSIFEREDPSPRSGSSLADLERRQAERKKEIMKAQAMPKMSASQARKAMIEKLEKEGGSF GVPNANTIKQMLLDWCRAKTRGYEHVDIQNFSSSWSDGMAFCALVHNFFPEAFDYTQLSPQDRRHNFEKAFSAADASSFQ LGPPQAFLILPSRSGVLSLPSSEGAGQDEKVLTFLSAALRRLVDCVPLVDVEDMMIMGKRPDAKCVFTYVQSLYNHLRRH ELQRRQSHL |
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