Gene
| Gene Model ID | habu1_s2696_g09646 |
|---|---|
| Locus | habu1_scaffold2696 : 898183 ... 902317 : - |
| To GenomeBrowser | habu1_scaffold2696:898183..902317 |
| Genes list of scaffold | habu1_scaffold2696 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| zinc finger protein 484-like | GO:0005488 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2696_g09646.t1 | 1 | 1 | KRAB | 11 | 51 | 2.9e-18 | 65.0 | 3.3e-21 | 4.8e-18 | 64.3 |
| habu1_s2696_g09646.t1 | 8 | 1 | zf-C2H2 | 279 | 301 | 3.9e-35 | 118.0 | 6.8e-06 | 0.01 | 16.1 |
| habu1_s2696_g09646.t1 | 8 | 1 | zf-H2C2_2 | 294 | 318 | 0.0 | 174.8 | 1.2e-07 | 0.00018 | 21.6 |
| habu1_s2696_g09646.t1 | 5 | 1 | zf-C2H2_6 | 306 | 329 | 5.7e-33 | 111.7 | 4.4e-08 | 6.6e-05 | 22.6 |
| habu1_s2696_g09646.t1 | 8 | 2 | zf-C2H2 | 307 | 329 | 3.9e-35 | 118.0 | 3.4e-08 | 5.0e-05 | 23.3 |
| habu1_s2696_g09646.t1 | 8 | 2 | zf-H2C2_2 | 322 | 344 | 0.0 | 174.8 | 2.5e-08 | 3.7e-05 | 23.7 |
| habu1_s2696_g09646.t1 | 8 | 3 | zf-C2H2 | 335 | 357 | 3.9e-35 | 118.0 | 8.8e-07 | 0.0013 | 18.9 |
| habu1_s2696_g09646.t1 | 8 | 3 | zf-H2C2_2 | 350 | 373 | 0.0 | 174.8 | 4.2e-11 | 6.2e-08 | 32.5 |
| habu1_s2696_g09646.t1 | 5 | 2 | zf-C2H2_6 | 362 | 385 | 5.7e-33 | 111.7 | 3.5e-07 | 0.00053 | 19.8 |
| habu1_s2696_g09646.t1 | 8 | 4 | zf-C2H2 | 363 | 385 | 3.9e-35 | 118.0 | 1.8e-07 | 0.00027 | 21.0 |
| habu1_s2696_g09646.t1 | 8 | 4 | zf-H2C2_2 | 378 | 400 | 0.0 | 174.8 | 2.8e-08 | 4.1e-05 | 23.6 |
| habu1_s2696_g09646.t1 | 5 | 3 | zf-C2H2_6 | 390 | 413 | 5.7e-33 | 111.7 | 5.5e-07 | 0.00082 | 19.1 |
| habu1_s2696_g09646.t1 | 8 | 5 | zf-C2H2 | 391 | 413 | 3.9e-35 | 118.0 | 2.9e-07 | 0.00043 | 20.4 |
| habu1_s2696_g09646.t1 | 8 | 5 | zf-H2C2_2 | 406 | 429 | 0.0 | 174.8 | 9.9e-08 | 0.00015 | 21.9 |
| habu1_s2696_g09646.t1 | 8 | 6 | zf-C2H2 | 419 | 441 | 3.9e-35 | 118.0 | 8.8e-08 | 0.00013 | 22.0 |
| habu1_s2696_g09646.t1 | 8 | 6 | zf-H2C2_2 | 435 | 457 | 0.0 | 174.8 | 4.7e-09 | 7.0e-06 | 26.0 |
| habu1_s2696_g09646.t1 | 8 | 7 | zf-H2C2_2 | 462 | 485 | 0.0 | 174.8 | 2.5e-11 | 3.7e-08 | 33.2 |
| habu1_s2696_g09646.t1 | 5 | 4 | zf-C2H2_6 | 474 | 499 | 5.7e-33 | 111.7 | 9.6e-09 | 1.4e-05 | 24.7 |
| habu1_s2696_g09646.t1 | 8 | 7 | zf-C2H2 | 475 | 497 | 3.9e-35 | 118.0 | 1.7e-08 | 2.5e-05 | 24.3 |
| habu1_s2696_g09646.t1 | 2 | 1 | zf-C2H2_4 | 475 | 497 | 3.0e-20 | 71.0 | 6.5e-07 | 0.00096 | 19.3 |
| habu1_s2696_g09646.t1 | 8 | 8 | zf-H2C2_2 | 490 | 513 | 0.0 | 174.8 | 9.7e-10 | 1.4e-06 | 28.2 |
| habu1_s2696_g09646.t1 | 8 | 8 | zf-C2H2 | 503 | 525 | 3.9e-35 | 118.0 | 7.3e-08 | 0.00011 | 22.3 |
| habu1_s2696_g09646.t1 | 5 | 5 | zf-C2H2_6 | 503 | 525 | 5.7e-33 | 111.7 | 1.0e-05 | 0.015 | 15.2 |
| habu1_s2696_g09646.t1 | 2 | 2 | zf-C2H2_4 | 503 | 525 | 3.0e-20 | 71.0 | 3.7e-06 | 0.0055 | 16.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2696_g09646.t1 | gi|602664186|ref|XP_007437715.1| | PREDICTED: zinc finger protein 484-like [Python bivittatus] | 0.0 |
| habu1_s2696_g09646.t1 | gi|637349274|ref|XP_008118004.1| | PREDICTED: zinc finger protein 454-like [Anolis carolinensis] | 0.0 |
| habu1_s2696_g09646.t1 | gi|641775404|ref|XP_008171122.1| | PREDICTED: putative zinc finger protein 56 [Chrysemys picta bellii] | 0.0 |
| habu1_s2696_g09646.t1 | gi|591373487|ref|XP_007061440.1| | PREDICTED: zinc finger protein 436-like [Chelonia mydas] | 0.0 |
| habu1_s2696_g09646.t1 | gi|564246298|ref|XP_006262262.1| | PREDICTED: zinc finger protein 709-like [Alligator mississippiensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.5 |
| Venom grand-1 | 2.1 |
| Pit, infrared sensing | 2.4 |
| Nose | 1.8 |
| Brain-1 | 2.3 |
| Eye | 3.0 |
| fetal fibroblast | 0.6 |
| venom gland-2 | 1.5 |
| Brain-2 | 2.8 |
| Spleen | 1.8 |
| Lung | 2.7 |
| Liver | 0.6 |
| Kidney | 1.5 |
| Pancreas | 0.8 |
| Small intestine | 1.4 |
| Large intestine | 2.2 |
| Stomach | 0.5 |
| heart | 1.2 |
| ovary | 2.7 |
| cheek muscle | 0.6 |
Transcript
| Transcript ID | habu1_s2696_g09646.t1 |
|---|---|
| Definition | - |
>habu1_s2696_g09646.t1 ggagttcgcccctgacccccgggtctcgcagccacagcctctttccaagcagagccccctaaaagccgccatggcccggg acgccagccgctccgctgcttgtcccccacctgggggctccgctccttcccaagtcctcnnnnnnnnnnncctgggaacg ccctgtttttgagctggcctttcccacccaaactctgcataaaaccaaagtcctgcattgatcagctggtcgtattgatt ctgaaggagctggactgcagggagaccagcaaagcctcaccttgagagatggctggagcccccacccggcaggatccagt gacgtttgaggaggtggcgatctacttttccgcaaacgagtgggaaacgctgaccgactggcagaggagcctctaccggg acgtcatgaaggacaactatgaagccctggtgtctctaggtctcgccgcgcagccccccagtgtcctcctgccgatcgga gcctgggaggagccctgtgcggggagagcacagttcccaaagtccagagaggattcaaaggacaatttggggggtggcca gccgaccgttaaagaggagccggcccttgatggagatgacacggggctgccgtgctgtccaccagcccggaaggggagcc agcaccatgggtccctctgcgagcagcccgggtggatgggaggctccctcgggcctgattctgcagtaaacggagcagcc ggtctgtctcccgggaacgtggggctcaagcgggagaactgcagcctggtaggtgagcaggctctgccggtggaatttca ggctgcacctcaaggggctggggaaagcggtttccggcccctgagcatcactgccccccagccaggcacccatgaggaga tgctgctgatctgcacccagtgccagaaatgttttcccatccattctgctctccgcatcccgacagtggtgccccgtgga gcattggggcaggtgtgccctgaatgtgagcgcggccacattaagagcccgccaacccctgctgaacccccaagccgagc cggggtgttgcccccctgctcctgtgcacactgctccacgctgagtgtccgcccgaggggggtcctcaaggaggagaggc cctacaagtgcgggaagtgtgagaagaccttccgatatgcccacgagtacagctggcaccagaaagtgcatgccggagag aagacctacaggtgcagcgactgcgccaaagtcttccggcaccagcaggagctgatgtggcaccagcgcacccacacggc tgagtggccccataaatgtggcacctgcgggaagaacttccgcttcaagcaagagctggcgtggcacctgaagacccact ctgtggagcgcccatacaaatgccccgagtgcgagaagagcttccggtacaagcaggagttcatgtggcaccagcgggcc cacgtgggggaccggccgtacaagtgtccggagtgtgagaagagcttccgcttcaagcaggagttcacctggcaccagag gagccacgccggagagaagacctaccggtgtcccggctgcgagaagagcttccgctacaagcaggagttcgtctggcacc aacggatccacaccggggagcagccgtacccctgcgcctcctgcagctccaccttcacctgccggcaggagtacatgcgc caccagcggctgcacgatggggagaagccctaccagtgtccccactgtgagaagactttccgccggggctccaccctcat ccggcaccggcgcgtccacatgggcgaagggcccttcaaatgcccccactgccagcgggcctttggccagagcaccaacc tcctcaagcaccagcggacgcacagcctgaagagccagccgctgcaggccgcctcagactggcgtccctgcctgcaggac agtgtgcccagtgtgctcagcctgaagacggtttcagggggggccctgctcctgctaaacctgccggaccccaaccgcgg gagggatccgggggctaagcccgatgcgtgggagcctcagatgtgacctgattcatgctggtggcatcttcagcgtggga atgttggcattcctaaagagttggattgagtccaccatgcgtcacacctgccccaactcaggaccccaggaaaggaagac cttcgactccatttggttgaagtgatagggtcttttactaccgtttttttccctaccttttccatccacagtcatgtgat cagagaatctgggatgtacgacggtaggaaaaacaatcatttttcgcaagaatctcatttagatgttaatgagcattcta ttattgtatttatttacagaaagcttttgtaaaaaaaataaaaataaagttcccatgacctact |
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Protein
| Protein ID | habu1_s2696_g09646.t1 |
|---|---|
| Definition | - |
>habu1_s2696_g09646.t1 MAGAPTRQDPVTFEEVAIYFSANEWETLTDWQRSLYRDVMKDNYEALVSLGLAAQPPSVLLPIGAWEEPCAGRAQFPKSR EDSKDNLGGGQPTVKEEPALDGDDTGLPCCPPARKGSQHHGSLCEQPGWMGGSLGPDSAVNGAAGLSPGNVGLKRENCSL VGEQALPVEFQAAPQGAGESGFRPLSITAPQPGTHEEMLLICTQCQKCFPIHSALRIPTVVPRGALGQVCPECERGHIKS PPTPAEPPSRAGVLPPCSCAHCSTLSVRPRGVLKEERPYKCGKCEKTFRYAHEYSWHQKVHAGEKTYRCSDCAKVFRHQQ ELMWHQRTHTAEWPHKCGTCGKNFRFKQELAWHLKTHSVERPYKCPECEKSFRYKQEFMWHQRAHVGDRPYKCPECEKSF RFKQEFTWHQRSHAGEKTYRCPGCEKSFRYKQEFVWHQRIHTGEQPYPCASCSSTFTCRQEYMRHQRLHDGEKPYQCPHC EKTFRRGSTLIRHRRVHMGEGPFKCPHCQRAFGQSTNLLKHQRTHSLKSQPLQAASDWRPCLQDSVPSVLSLKTVSGGAL LLLNLPDPNRGRDPGAKPDAWEPQM |
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