Gene
| Gene Model ID | habu1_s2696_g09648 |
|---|---|
| Locus | habu1_scaffold2696 : 917264 ... 947007 : - |
| To GenomeBrowser | habu1_scaffold2696:917264..947007 |
| Genes list of scaffold | habu1_scaffold2696 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| oxysterol-binding protein 2 isoform x4 | GO:0006810 GO:0015485 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2696_g09648.t1 | 1 | 1 | PH | 78 | 164 | 4.2e-12 | 46.1 | 5.0e-15 | 1.2e-11 | 44.6 |
| habu1_s2696_g09648.t1 | 1 | 1 | PH_11 | 79 | 163 | 9.6e-08 | 32.2 | 5.2e-10 | 1.3e-06 | 28.6 |
| habu1_s2696_g09648.t1 | 1 | 1 | PH_8 | 87 | 165 | 1.5e-12 | 47.4 | 1.8e-15 | 4.5e-12 | 45.8 |
| habu1_s2696_g09648.t1 | 2 | 1 | Oxysterol_BP | 425 | 445 | 0.0 | 280.9 | 2.2e-07 | 0.00054 | 18.5 |
| habu1_s2696_g09648.t1 | 2 | 2 | Oxysterol_BP | 445 | 720 | 0.0 | 280.9 | 0.0 | 0.0 | 264.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2696_g09648.t1 | gi|471415725|ref|XP_004389389.1| | 0.0 | |
| habu1_s2696_g09648.t1 | gi|488530080|ref|XP_004456813.1| | PREDICTED: oxysterol-binding protein 1 [Dasypus novemcinctus] | 0.0 |
| habu1_s2696_g09648.t1 | gi|637349259|ref|XP_008118000.1| | PREDICTED: oxysterol-binding protein 2 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s2696_g09648.t1 | gi|513211094|ref|XP_415293.4| | PREDICTED: oxysterol-binding protein 2 isoform X3 [Gallus gallus] | 0.0 |
| habu1_s2696_g09648.t1 | gi|513211091|ref|XP_004934489.1| | PREDICTED: oxysterol-binding protein 2 isoform X4 [Gallus gallus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.2 |
| Venom grand-1 | 2.4 |
| Pit, infrared sensing | 5.3 |
| Nose | 3.0 |
| Brain-1 | 7.5 |
| Eye | 21.8 |
| fetal fibroblast | 7.9 |
| venom gland-2 | 3.9 |
| Brain-2 | 8.0 |
| Spleen | 5.2 |
| Lung | 11.7 |
| Liver | 12.4 |
| Kidney | 11.9 |
| Pancreas | 6.4 |
| Small intestine | 2.6 |
| Large intestine | 5.3 |
| Stomach | 10.0 |
| heart | 5.5 |
| ovary | 4.5 |
| cheek muscle | 12.5 |
Transcript
| Transcript ID | habu1_s2696_g09648.t1 |
|---|---|
| Definition | - |
>habu1_s2696_g09648.t1 gggaggagggggcgtgtcccgggtcacgtgtgccaccccggcccctccccagnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggcgggggcgccgatgggcagggcggccgctccgc tgtgcagcgacggcgcccgcgggctggtctcgctgttgggcgccgtgccgtgcctggcctgcaagcagccgccgccgtcc cgggccccgccgagcgccgccgccgccatgagcctggccggggagagctgtcccgccgccgccgccgccgccgccgccgc ctcctccgcctcctcctcctgctcgtcgctggccggcggctcggacacctacaagggctggctcttcaagtggaccaact acctgaagggctaccagcgccgctggttcgtgctcagcaatgggctgctcagctattacaggactcaagcggaaatggcc cacacctgccggggaaccatcaacctgtccatggctcacattgacacggaggattcttgcaatattctcctttccaacgg gggaaggacctaccacttgaaagccagctcggaagtggaacggcagcgttgggtcacagccctggagctggctaaggcca gggccatccgaatcaggagcaaccagtcagatgactccggcgacgaggaatccacctcgcagtctgacaagagcgaagtg cacagcacgctgaagcacctctccggtaaactggacgacctcagcgctttcaacgacctgatcgccaagcacggggcggc tctccagaggtccctgagtgagctggagaacctcaagttgccggccgagagcggggagaagatcaaggcggtcaacgagc gagccaccctcttcaggatcacctccaatgctatgataaatgcctgccgggacttcctggatcttgcagaggcccacagc agaaagtggcagcgggcccttcagcacgaatgtgagcagcgcatccgcctggaggagactatcgagcagttggccaagca gcacaatcacctagaacgggcttgtcggggagcgcccagcctctccgcgaaccccactgcgcacgcatcccgagcaggaa gcgtgcagagtggaaaaggagacgccagtgatgaagatgaggagacggagtactttgatgctatggaagacgctcatgct ttcatcacagtagccaccgagccaccaaaacatcaccggcacaccagcagcaacattagtgtgggcagcgagggtcgttc agacgattggaccttgagctgcagtgtgtttgaggcctccactcatactggcctcggtgcttcaagcaagcatggtgttg cccacaagaagaggcgcactgaaattccagacaagcccaactacagccttaacctctggagcataatgaagaattgcatc ggtaaagaactgtccaagatccctatgcctgtgagccatcaccccccagcagcagctcaccacgtgtactccaggcgtgg ctggacgctgtggcaggagatcaccattgccagcaagttccgtggcaaatacctttccatcttgccactgggcaccatcc acctcgaattccactccagcggcaatcactatatctggcaaaaagtgacatccacagttcacaatattattgtgggaaaa ctctggattgaccagtctggtgacatagaaatcctcaaccacaaatcgaaagacaaatgccagctgaaattcacacccta cagttacttctccagagacatcccccggaaggtgacgggggtggtgatggatgccgatggcaatgagcgctacgtcatgt ccggcacgtgggacgagaagatggagtgttccaagatcattgaaaccagccagggaaactccatttcggaaggcaagctt ccgaaaacggtctaccagaccttgtccccaaaggtcctgtggaagaaatatcccctcccggagaacgccgaaaacatgta cttcttctccaaactggcgctgacccttaacgagccggaagagggcgtcgctcccacggatagccgcctgaggcctgatc agcagctgatggagaacggcaaatgggacgaggccaacatggagaaacaacgcttagaagagaagcaacgggccgtgcgc cgacagcgggaagtcgaggcagccgaagcgctggcagaaggcaaggactacaagggctacatcccaatgtggtttgagag gaaggtggatccggtgacaggggagctgatgtgcgtctacaagggcggttactgggagagcaaagagaagcaggactgga gccagtgtcccagcatcttctgagctgagctcgtgggtgccgggtgcgaagcctctgcatccgtggcgggatggaagggc cggtagctgagcccctctgggtggtctcctgccctcccccctccctcccaccccagccgcctttcggagaaacacgcaga gattcaaataaatcccgaattgaaaaacaaaaaa |
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Protein
| Protein ID | habu1_s2696_g09648.t1 |
|---|---|
| Definition | - |
>habu1_s2696_g09648.t1 MGRAAAPLCSDGARGLVSLLGAVPCLACKQPPPSRAPPSAAAAMSLAGESCPAAAAAAAAASSASSSCSSLAGGSDTYKG WLFKWTNYLKGYQRRWFVLSNGLLSYYRTQAEMAHTCRGTINLSMAHIDTEDSCNILLSNGGRTYHLKASSEVERQRWVT ALELAKARAIRIRSNQSDDSGDEESTSQSDKSEVHSTLKHLSGKLDDLSAFNDLIAKHGAALQRSLSELENLKLPAESGE KIKAVNERATLFRITSNAMINACRDFLDLAEAHSRKWQRALQHECEQRIRLEETIEQLAKQHNHLERACRGAPSLSANPT AHASRAGSVQSGKGDASDEDEETEYFDAMEDAHAFITVATEPPKHHRHTSSNISVGSEGRSDDWTLSCSVFEASTHTGLG ASSKHGVAHKKRRTEIPDKPNYSLNLWSIMKNCIGKELSKIPMPVSHHPPAAAHHVYSRRGWTLWQEITIASKFRGKYLS ILPLGTIHLEFHSSGNHYIWQKVTSTVHNIIVGKLWIDQSGDIEILNHKSKDKCQLKFTPYSYFSRDIPRKVTGVVMDAD GNERYVMSGTWDEKMECSKIIETSQGNSISEGKLPKTVYQTLSPKVLWKKYPLPENAENMYFFSKLALTLNEPEEGVAPT DSRLRPDQQLMENGKWDEANMEKQRLEEKQRAVRRQREVEAAEALAEGKDYKGYIPMWFERKVDPVTGELMCVYKGGYWE SKEKQDWSQCPSIF |
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