Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s2696_g09649
Locus habu1_scaffold2696 : 947682 ... 949717 : -
To GenomeBrowser habu1_scaffold2696:947682..949717
Genes list of scaffold habu1_scaffold2696

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s2696_g09649.t1 gi|641704494|ref|XP_008141040.1| PREDICTED: uncharacterized protein C5orf52 homolog [Eptesicus fuscus] 1.0e-26
habu1_s2696_g09649.t1 gi|554550745|ref|XP_005869886.1| PREDICTED: uncharacterized protein C5orf52 homolog-like [Myotis brandtii] 2.0e-26
habu1_s2696_g09649.t1 gi|558198478|ref|XP_006104943.1| PREDICTED: uncharacterized protein C5orf52 homolog [Myotis lucifugus] 5.0e-26
habu1_s2696_g09649.t1 gi|584084792|ref|XP_006762146.1| PREDICTED: uncharacterized protein C5orf52 homolog [Myotis davidii] 1.0e-25
habu1_s2696_g09649.t1 gi|223468667|ref|NP_001138605.1| uncharacterized protein C5orf52 homolog [Bos taurus] 2.0e-25

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.0
Venom grand-1 0.0
Pit, infrared sensing 0.1
Nose 0.2
Brain-1 0.2
Eye 0.1
fetal fibroblast 0.0
venom gland-2 0.2
Brain-2 0.4
Spleen 0.0
Lung 4.2
Liver 0.0
Kidney 0.0
Pancreas 0.3
Small intestine 0.0
Large intestine 0.0
Stomach 0.0
heart 0.2
ovary 1.1
cheek muscle 0.2

Transcript
Transcript IDhabu1_s2696_g09649.t1
Definition-
>habu1_s2696_g09649.t1
accgctttggcccgcttggcccggctgagtcagccgccgggagcccgggcgatggagaaggcgccggagggagcccagcc
cgtcgtgactttcctccagccccgcgagcatcaagtgctggtgctgtacagtcagcaaacttgtggcgaagctgctttga
agagatttcttcccaaaagtcacctggctaaggtgatcatccaggacaatgttagtgttcagcggatccaggagattacg
gcccagcaaatcgaaggtaggaaaaagaaggcggagaatctgtttgatcaaatgaaaaggagatttctccagaaccagca
gaaaaagaccttccgttggaagaaagaatatagctattaccagaagatgttggaagagatcgatcagcagaacttgttgc
gaaaattaggcagcacgtttacgtcgaaggaaagtcctcactcctcttctgcaccctgggggaaacccggggccacctca
agccggctcagataactggaatcacgctggggaaatggcgtttacggggtcatttcgtcagaataaaaccgtgtttaaaa
ccggatcca

Protein
Protein IDhabu1_s2696_g09649.t1
Definition-
>habu1_s2696_g09649.t1
MEKAPEGAQPVVTFLQPREHQVLVLYSQQTCGEAALKRFLPKSHLAKVIIQDNVSVQRIQEITAQQIEGRKKKAENLFDQ
MKRRFLQNQQKKTFRWKKEYSYYQKMLEEIDQQNLLRKLGSTFTSKESPHSSSAPWGKPGATSSRLR

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Chromosome
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495