Gene
| Gene Model ID | habu1_s2740_g09755 |
|---|---|
| Locus | habu1_scaffold2740 : 159936 ... 166445 : - |
| To GenomeBrowser | habu1_scaffold2740:159936..166445 |
| Genes list of scaffold | habu1_scaffold2740 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 39s ribosomal protein mitochondrial | GO:0003735 GO:0005739 GO:0005840 GO:0006412 GO:0042254 GO:0044822 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2740_g09755.t2 | 1 | 1 | PDCD9 | 53 | 351 | 3.6e-20 | 72.1 | 3.9e-24 | 5.8e-20 | 71.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2740_g09755.t2 | gi|698397916|ref|XP_009696850.1| | PREDICTED: 39S ribosomal protein L37, mitochondrial, partial [Cariama cristata] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 20.4 |
| Venom grand-1 | 28.4 |
| Pit, infrared sensing | 21.1 |
| Nose | 19.3 |
| Brain-1 | 11.3 |
| Eye | 20.0 |
| fetal fibroblast | 49.1 |
| venom gland-2 | 36.7 |
| Brain-2 | 17.1 |
| Spleen | 20.4 |
| Lung | 20.2 |
| Liver | 35.0 |
| Kidney | 24.4 |
| Pancreas | 29.7 |
| Small intestine | 25.1 |
| Large intestine | 22.5 |
| Stomach | 27.4 |
| heart | 66.4 |
| ovary | 108.9 |
| cheek muscle | 44.8 |
Transcript
| Transcript ID | habu1_s2740_g09755.t1 |
|---|---|
| Definition | - |
>habu1_s2740_g09755.t1 cgaagccgcctgcaggaaggtgtgaagcaagcattgtggctaaccaaggcaaagctaataaaaggcttaccctccccaat acttaacataatgaatgacataactcaccagttggaggaccaggatgagagaattctaaatgcaatttctcgtgctcgtt tttgggctggcactgaagatgatgtttcatttgataaatacagtcctgtgcttctggaagacctgctccatttgtgcagg tcaatgactgtcaaatatccctcactgaataaaagaatgatgtcccaagactacagagcaacaactacatgggaacgaga gtctgctctcattcagattaatattacttgtggaaagcttctgaatgcagaaaattgcctacaacctatagcatccagtg atgagatattggccactgaagatcatgatttagaaacgttctatcctatttcacccataattgatcttagggaaaagaat gtatacaaaataaaaaacgacactggtttcaacaaagactacccatatccttatcctcatacagcatacactattgaaag tgggaaaagggagaaatcggaacatttacaagccagagttttgatgtttgcttttgggaatgctctagccaaggctaaga aactttatggagatgaacccaaagtcttggagaagccagtagttgttcagagtattggtacaaatggccaagctttccat tttgtagtgtttcagttgaacacaacagatttggactctagcaatggtgttaaaaacctggcctggctggatgcggatca gcttttgtatgaggatgccaggaagcatccagaaatcaagaagaaaatagtcctgattcctgctggaatacatggctata acccagacacattcaaaaaattcctggcactctacttgcacggtgttgtgtgaacagatcccaggaagtctgagctcaac ttctagttcttcctgaaatactacactagacgtaccgttaacacaagactgaaaaggatatgtttatttgtaataaaaga tatttttaaatacacgtgt |
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| Transcript ID | habu1_s2740_g09755.t2 |
| Definition | - |
>habu1_s2740_g09755.t2 cgaagccgcctgcaggaagaattccttgaagtccgcaagtcatgaaagggccaagtttgaagaccccctgcactagactt tctgcctgcctggctgaggaattctgggagttgaagtccacaagtcataaaagggccaagtttgaagatgaccccctgga ttatcctgatggagccagcaactgggcgctctcaggtgtgaagcaagcattgtggctaaccaaggcaaagctaataaaag gcttaccctccccaatacttaacataatgaatgacataactcaccagttggaggaccaggatgagagaattctaaatgca atttctcgtgctcgtttttgggctggcactgaagatgatgtttcatttgataaatacagtcctgtgcttctggaagacct gctccatttgtgcaggtcaatgactgtcaaatatccctcactgaataaaagaatgatgtcccaagactacagagcaacaa ctacatgggaacgagagtctgctctcattcagattaatattacttgtggaaagcttctgaatgcagaaaattgcctacaa cctatagcatccagtgatgagatattggccactgaagatcatgatttagaaacgttctatcctatttcacccataattga tcttagggaaaagaatgtatacaaaataaaaaacgacactggtttcaacaaagactacccatatccttatcctcatacag catacactattgaaagtgggaaaagggagaaatcggaacatttacaagccagagttttgatgtttgcttttgggaatgct ctagccaaggctaagaaactttatggagatgaacccaaagtcttggagaagccagtagttgttcagagtattggtacaaa tggccaagctttccattttgtagtgtttcagttgaacacaacagatttggactctagcaatggtgttaaaaacctggcct ggctggatgcggatcagcttttgtatgaggatgccaggaagcatccagaaatcaagaagaaaatagtcctgattcctgct ggaatacatggctataacccagacacattcaaaaaattcctggcactctacttgcacggtgttgtgtgaacagatcccag gaagtctgagctcaacttctagttcttcctgaaatactacactagacgtaccgttaacacaagactgaaaaggatatgtt tatttgtaataaaagatatttttaaatacacgtgt |
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Protein
| Protein ID | habu1_s2740_g09755.t1 |
|---|---|
| Definition | - |
>habu1_s2740_g09755.t1 MNDITHQLEDQDERILNAISRARFWAGTEDDVSFDKYSPVLLEDLLHLCRSMTVKYPSLNKRMMSQDYRATTTWERESAL IQINITCGKLLNAENCLQPIASSDEILATEDHDLETFYPISPIIDLREKNVYKIKNDTGFNKDYPYPYPHTAYTIESGKR EKSEHLQARVLMFAFGNALAKAKKLYGDEPKVLEKPVVVQSIGTNGQAFHFVVFQLNTTDLDSSNGVKNLAWLDADQLLY EDARKHPEIKKKIVLIPAGIHGYNPDTFKKFLALYLHGVV |
|
| Protein ID | habu1_s2740_g09755.t2 |
| Definition | - |
>habu1_s2740_g09755.t2 MKGPSLKTPCTRLSACLAEEFWELKSTSHKRAKFEDDPLDYPDGASNWALSGVKQALWLTKAKLIKGLPSPILNIMNDIT HQLEDQDERILNAISRARFWAGTEDDVSFDKYSPVLLEDLLHLCRSMTVKYPSLNKRMMSQDYRATTTWERESALIQINI TCGKLLNAENCLQPIASSDEILATEDHDLETFYPISPIIDLREKNVYKIKNDTGFNKDYPYPYPHTAYTIESGKREKSEH LQARVLMFAFGNALAKAKKLYGDEPKVLEKPVVVQSIGTNGQAFHFVVFQLNTTDLDSSNGVKNLAWLDADQLLYEDARK HPEIKKKIVLIPAGIHGYNPDTFKKFLALYLHGVV |
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