Gene
| Gene Model ID | habu1_s2740_g09758 |
|---|---|
| Locus | habu1_scaffold2740 : 252603 ... 263575 : - |
| To GenomeBrowser | habu1_scaffold2740:252603..263575 |
| Genes list of scaffold | habu1_scaffold2740 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transcription elongation factor a n-terminal and central domain-containing protein 2 | GO:0003677 GO:0003746 GO:0005634 GO:0005840 GO:0006351 GO:0006448 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2740_g09758.t2 | 1 | 1 | Med26 | 89 | 139 | 9.2e-16 | 57.1 | 1.2e-18 | 4.5e-15 | 54.8 |
| habu1_s2740_g09758.t2 | 1 | 1 | TFIIS_M | 156 | 232 | 2.4e-08 | 34.0 | 5.0e-11 | 1.8e-07 | 31.1 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 8.8 |
| Venom grand-1 | 10.3 |
| Pit, infrared sensing | 8.0 |
| Nose | 10.7 |
| Brain-1 | 5.1 |
| Eye | 5.7 |
| fetal fibroblast | 11.7 |
| venom gland-2 | 14.8 |
| Brain-2 | 5.6 |
| Spleen | 10.2 |
| Lung | 6.4 |
| Liver | 26.3 |
| Kidney | 15.5 |
| Pancreas | 8.8 |
| Small intestine | 9.8 |
| Large intestine | 11.3 |
| Stomach | 16.3 |
| heart | 9.0 |
| ovary | 79.9 |
| cheek muscle | 14.0 |
Transcript
| Transcript ID | habu1_s2740_g09758.t1 |
|---|---|
| Definition | - |
>habu1_s2740_g09758.t1 atcctggagaaatagtgctttttctcagatgatggataaatttgttgtaagaacacccagaactaaaggagaacctacaa agagcaatcctggaaaaaagatttataaacaagctacaatagaatctctgaagagagttgtagttgtagaagatctaaaa agatggaaatctgtactagagctttcaattcaacctaaggagaacctaattgaggccttgatggagttaaggaagaaaat accttccaaggaaattttactttcaacgaaaataggtcatacagtgaataagatgcggaaacacccggaccaggatgtgg ccactcttgcgaaagaggtttacgctgagtggagaagctttattaaaaaccagtcaaatagacctttaattgaagtcagg tgtaatcccagaacagagagcctgaggcagaatgcccggaagctactagcagaagctctagaagtcgagattggtcacct gctggcagaaaatattgagcaagaagctttttatctctcttcccatcttgttaacacgtcctatcgcaggaccgtgcgag cactcgtgttctctttgaagcacaatccggaaactcgcgcacaagtacaaagtggggttttgccagttaagatgcttgtc caaagccacaaaaagtgattcatatggagattatggagattgtaaaatggcataagtattccaaaacatgggacttcttt ttggtggactaagcatgttttggatcaatcataatgtggaaacatgtatatttaagaaactttgttgctggcccaatcat catttgaagcaaatggtggtgtgcaagattgggtaagggcattcttctatcttatgacaacctagaaagaaatctatttt agacagtagagtctacaacttttgtagtatgccagaaacctataagaactgaaataaaatgtgcaaaatgaaaagtgacc |
|
| Transcript ID | habu1_s2740_g09758.t2 |
| Definition | - |
>habu1_s2740_g09758.t2 atcctggagaaatagtgctttttctcagatgatggataaatttgttgtaagaacacccagaactaaaggagaacctacaa agagcaatcctggaaaaaagatttataaacaagctacaatagaatctctgaagatttcactcgcttactttacatcaggg actcgctgtgaaacaagtactcatctgtgtggattatccgattttcggaatttgactagagttgtagttgtagaagatct aaaaagatggaaatctgtactagagctttcaattcaacctaaggagaacctaattgaggccttgatggagttaaggaaga aaataccttccaaggaaattttactttcaacgaaaataggtcatacagtgaataagatgcggaaacacccggaccaggat gtggccactcttgcgaaagaggtttacgctgagtggagaagctttattaaaaaccagtcaaatagacctttaattgaagt caggtgtaatcccagaacagagagcctgaggcagaatgcccggaagctactagcagaagctctagaagtcgagattggtc acctgctggcagaaaatattgagcaagaagctttttatctctcttcccatcttgttaacacgtcctatcgcaggaccgtg cgagcactcgtgttctctttgaagcacaatccggaaactcgcgcacaagtacaaagtggggttttgccagttaagatgct tgtccaaagccacaaaaagtgattcatatggagattatggagattgtaaaatggcataagtattccaaaacatgggactt ctttttggtggactaagcatgttttggatcaatcataatgtggaaacatgtatatttaagaaactttgttgctggcccaa tcatcatttgaagcaaatggtggtgtgcaagattgggtaagggcattcttctatcttatgacaacctagaaagaaatcta ttttagacagtagagtctacaacttttgtagtatgccagaaacctataagaactgaaataaaatgtgcaaaatgaaaagt gacc |
|
Protein
| Protein ID | habu1_s2740_g09758.t1 |
|---|---|
| Definition | - |
>habu1_s2740_g09758.t1 MDKFVVRTPRTKGEPTKSNPGKKIYKQATIESLKRVVVVEDLKRWKSVLELSIQPKENLIEALMELRKKIPSKEILLSTK IGHTVNKMRKHPDQDVATLAKEVYAEWRSFIKNQSNRPLIEVRCNPRTESLRQNARKLLAEALEVEIGHLLAENIEQEAF YLSSHLVNTSYRRTVRALVFSLKHNPETRAQVQSGVLPVKMLVQSHKK |
|
| Protein ID | habu1_s2740_g09758.t2 |
| Definition | - |
>habu1_s2740_g09758.t2 MDKFVVRTPRTKGEPTKSNPGKKIYKQATIESLKISLAYFTSGTRCETSTHLCGLSDFRNLTRVVVVEDLKRWKSVLELS IQPKENLIEALMELRKKIPSKEILLSTKIGHTVNKMRKHPDQDVATLAKEVYAEWRSFIKNQSNRPLIEVRCNPRTESLR QNARKLLAEALEVEIGHLLAENIEQEAFYLSSHLVNTSYRRTVRALVFSLKHNPETRAQVQSGVLPVKMLVQSHKK |
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