Gene
| Gene Model ID | habu1_s2740_g09759 |
|---|---|
| Locus | habu1_scaffold2740 : 264386 ... 285912 : + |
| To GenomeBrowser | habu1_scaffold2740:264386..285912 |
| Genes list of scaffold | habu1_scaffold2740 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transmembrane protein 59 isoform x1 | GO:0000137 GO:0000138 GO:0004175 GO:0005764 GO:0005770 GO:0005797 GO:0006508 GO:0010508 GO:0010955 GO:0070062 GO:0090005 GO:0090285 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2740_g09759.t2 | 1 | 1 | BSMAP | 72 | 258 | 0.0 | 220.4 | 0.0 | 0.0 | 220.4 |
| habu1_s2740_g09759.t2 | 3 | 1 | Ldl_recept_a | 397 | 429 | 1.2e-11 | 44.3 | 2.6e-09 | 1.9e-05 | 24.4 |
| habu1_s2740_g09759.t2 | 3 | 2 | Ldl_recept_a | 446 | 480 | 1.2e-11 | 44.3 | 2.0e-08 | 0.00015 | 21.5 |
| habu1_s2740_g09759.t2 | 3 | 3 | Ldl_recept_a | 482 | 523 | 1.2e-11 | 44.3 | 9.9e-07 | 0.0073 | 16.1 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 52.4 |
| Venom grand-1 | 64.7 |
| Pit, infrared sensing | 44.4 |
| Nose | 78.9 |
| Brain-1 | 23.6 |
| Eye | 37.0 |
| fetal fibroblast | 21.3 |
| venom gland-2 | 88.8 |
| Brain-2 | 28.6 |
| Spleen | 24.5 |
| Lung | 33.5 |
| Liver | 40.6 |
| Kidney | 44.1 |
| Pancreas | 46.5 |
| Small intestine | 32.1 |
| Large intestine | 35.6 |
| Stomach | 39.7 |
| heart | 25.9 |
| ovary | 33.7 |
| cheek muscle | 29.8 |
Transcript
| Transcript ID | habu1_s2740_g09759.t1 |
|---|---|
| Definition | - |
>habu1_s2740_g09759.t1 ggtggggggggcgaggtaacaagatggcggtggcgcggcggagccgtttagggtctctcctcctgctggtccttctcggc tctgaggcggcttggggtgacctggagcccgctccgaattccctttcggaggcttttgagccggcgttgggaaatacact gtcgtgtcaacggacttgccagaacacttacccgctccacacgtaccccaaggaagaagagctctatgcatgtcaaagag gttgcagattattttcaatttgtcagtttgtggatgatggaattgatttgaatcggaccaagatggaatgtgactctgca tgtactgaggcatatacctcccagtctgatgaacaatatgcttgccatcttggatgccagaatcagttaccatatgctga actaagacgtgaacaactcatgtccttaatgccaaaaattcatcgactcttcccacttacccttgtaagatccttctgga gtgatatgatggaaactgcccacagcttcattacctctacctggactttctatcttcaagctgatgatggcaaaatactg atatttcagtccaaaccagatgttcagtttgtacaaagtcctgatcaggaaaaccaagatttgaaagcatcatcactagc caagacatctttagatttacagttgggaggtccacatgcacataaaggatcttttgatgaggatgaaactgagagtttct tcaaatgtatttcactaaattctgggtggatattaacaaccactcttctcctgtctatacttgtgttgctgtggatttgt tgtgcaactgttactactgctgttgaacagtatgttccatctgagaagctgagcatctatggcgacttggagtatataaa tgaacaaaaattgaatcaatatccaacctctgctcttgtgataaattttgatacggattcactgggttcagccaaatccc atctcactgataagacagttaaccgtttatgtatgactaccagtaagcagacaggctttttatgtgataacagagagacc tgtattccagccagtgaagtttgtgacacaagaaaaaattgtgacaatggggaagatgagcaagaagcattatgtagtga tttgccaaacagtctccctggttacttgatattttattgcaaaaatcggaggctttggatctacgcagacaaaagatgta atggatttaatgattgtggagattgttctgatgaaatgggatcacaagccaactgtcctccttgtggatctcagttttgg agttgtaccctggtggtcttctatgattattgtacttgcattcctagaagtttttgccgagatggaatacaacattgctt tgactggtctgatgaatacctctgtacaagataagcagatgataaacataaccttggagaaaataaaaagcaatccactg agaaccaggctgcgatggaattgcagataactttaaagagacctcacaaagaatgttttatatagtgttgctcttcacag cacttgccctgcttggctgcaggggccacttgttttgcattgcagtcacctagttctcacagtgaagctattcatccgtg acagccaagaggattttggttttcattcagtttgtcacagagcctgacactgctgtttccagatcaatggcttgtttaaa ttcagtctttataatcttccaatcttgcacagatgctcatgtaccaataaagcacctccttatttgtacatca |
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| Transcript ID | habu1_s2740_g09759.t2 |
| Definition | - |
>habu1_s2740_g09759.t2 ggtggggggggcgaggtaacaagatggcggtggcgcggcggagccgtttagggtctctcctcctgctggtccttctcggc tctgaggcggcttggggtgacctggagcccgctccgaattccctttcggaggcttttgagccggcgttgggaaatacact gtcgtgtcaacggacttgccagaacacttacccgctccacacgtaccccaaggaagaagagctctatgcatgtcaaagag gttgcagattattttcaatttgtcagtttgtggatgatggaattgatttgaatcggaccaagatggaatgtgactctgca tgtactgaggcatatacctcccagtctgatgaacaatatgcttgccatcttggatgccagaatcagttaccatatgctga actaagacgtgaacaactcatgtccttaatgccaaaaattcatcgactcttcccacttacccttgtaagatccttctgga gtgatatgatggaaactgcccacagcttcattacctctacctggactttctatcttcaagctgatgatggcaaaatactg atatttcagtccaaaccagatgttcagtttgtacaaagtcctgatcaggaaaaccaagatttgaaagcatcatcactagc caagacatctttagatttacagttgggaggtccacatgcacataaaggatcttttgatgaggatgaaactgagagtttct tcaaatgtatttcactaaattctgggtggatattaacaaccactcttctcctgtctatacttgtgttgctgtggatttgt tgtgcaactgttactactgctgttgaacagtatgttccatctgagaagctgagcatctatggcgacttggagtatataaa tgaacaaaaattgaatcaatatccaacctctgctcttgtgatagtaaaatcttccagaaggaaaatgaatagaacttacc ctcagaattttgatacggattcactgggttcagccaaatcccatctcactgataagacagcaggtaccactcatgaccaa ccagactgctgtagaaagtgtttttcttggaccctttgcactcgacgatgcatctgtgtatctgccattagtcttattat acttggtataatcattgccatcatcacattggctgtgactgtcggcattcctcctcctaccccagttaaccgtttatgta tgactaccagtaagcagacaggctttttatgtgataacagagagacctgtattccagccagtgaagtttgtgacacaaga aaaaattgtgacaatggggaagatgagcaagaagcattatgtagtgatttgccaaacagtctccctggttacttgatatt ttattgcaaaaatcggaggctttggatctacgcagacaaaagatgtaatggatttaatgattgtggagattgttctgatg aaatgggatcacaagccaactgtcctccttgtggatctcagttttggagttgtaccctggtggtcttctatgattattgt acttgcattcctagaagtttttgccgagatggaatacaacattgctttgactggtctgatgaatacctctgtacaagata agcagatgataaacataaccttggagaaaataaaaagcaatccactgagaaccaggctgcgatggaattgcagataactt taaagagacctcacaaagaatgttttatatagtgttgctcttcacagcacttgccctgcttggctgcaggggccacttgt tttgcattgcagtcacctagttctcacagtgaagctattcatccgtgacagccaagaggattttggttttcattcagttt gtcacagagcctgacactgctgtttccagatcaatggcttgtttaaattcagtctttataatcttccaatcttgcacaga tgctcatgtaccaataaagcacctccttatttgtacatca |
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Protein
| Protein ID | habu1_s2740_g09759.t1 |
|---|---|
| Definition | - |
>habu1_s2740_g09759.t1 MAVARRSRLGSLLLLVLLGSEAAWGDLEPAPNSLSEAFEPALGNTLSCQRTCQNTYPLHTYPKEEELYACQRGCRLFSIC QFVDDGIDLNRTKMECDSACTEAYTSQSDEQYACHLGCQNQLPYAELRREQLMSLMPKIHRLFPLTLVRSFWSDMMETAH SFITSTWTFYLQADDGKILIFQSKPDVQFVQSPDQENQDLKASSLAKTSLDLQLGGPHAHKGSFDEDETESFFKCISLNS GWILTTTLLLSILVLLWICCATVTTAVEQYVPSEKLSIYGDLEYINEQKLNQYPTSALVINFDTDSLGSAKSHLTDKTVN RLCMTTSKQTGFLCDNRETCIPASEVCDTRKNCDNGEDEQEALCSDLPNSLPGYLIFYCKNRRLWIYADKRCNGFNDCGD CSDEMGSQANCPPCGSQFWSCTLVVFYDYCTCIPRSFCRDGIQHCFDWSDEYLCTR |
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| Protein ID | habu1_s2740_g09759.t2 |
| Definition | - |
>habu1_s2740_g09759.t2 MAVARRSRLGSLLLLVLLGSEAAWGDLEPAPNSLSEAFEPALGNTLSCQRTCQNTYPLHTYPKEEELYACQRGCRLFSIC QFVDDGIDLNRTKMECDSACTEAYTSQSDEQYACHLGCQNQLPYAELRREQLMSLMPKIHRLFPLTLVRSFWSDMMETAH SFITSTWTFYLQADDGKILIFQSKPDVQFVQSPDQENQDLKASSLAKTSLDLQLGGPHAHKGSFDEDETESFFKCISLNS GWILTTTLLLSILVLLWICCATVTTAVEQYVPSEKLSIYGDLEYINEQKLNQYPTSALVIVKSSRRKMNRTYPQNFDTDS LGSAKSHLTDKTAGTTHDQPDCCRKCFSWTLCTRRCICVSAISLIILGIIIAIITLAVTVGIPPPTPVNRLCMTTSKQTG FLCDNRETCIPASEVCDTRKNCDNGEDEQEALCSDLPNSLPGYLIFYCKNRRLWIYADKRCNGFNDCGDCSDEMGSQANC PPCGSQFWSCTLVVFYDYCTCIPRSFCRDGIQHCFDWSDEYLCTR |
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