Gene
| Gene Model ID | habu1_s2740_g09760 |
|---|---|
| Locus | habu1_scaffold2740 : 289698 ... 298345 : - |
| To GenomeBrowser | habu1_scaffold2740:289698..298345 |
| Genes list of scaffold | habu1_scaffold2740 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2740_g09760.t2 | 1 | 1 | LRR_4 | 199 | 244 | 4.6e-08 | 32.5 | 5.8e-06 | 0.017 | 14.7 |
| habu1_s2740_g09760.t2 | 1 | 1 | LRR_6 | 230 | 252 | 2.8e-10 | 39.1 | 7.9e-07 | 0.0023 | 17.7 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.9 |
| Venom grand-1 | 3.4 |
| Pit, infrared sensing | 3.6 |
| Nose | 4.2 |
| Brain-1 | 1.5 |
| Eye | 2.8 |
| fetal fibroblast | 7.4 |
| venom gland-2 | 4.3 |
| Brain-2 | 2.0 |
| Spleen | 2.1 |
| Lung | 1.7 |
| Liver | 3.4 |
| Kidney | 3.1 |
| Pancreas | 0.8 |
| Small intestine | 1.7 |
| Large intestine | 2.5 |
| Stomach | 3.0 |
| heart | 3.2 |
| ovary | 48.6 |
| cheek muscle | 5.0 |
Transcript
| Transcript ID | habu1_s2740_g09760.t1 |
|---|---|
| Definition | - |
>habu1_s2740_g09760.t1 gttgcatacctcagagtgggtttggggaggctgctggttgttttcagtgttcccctgctgaaatcgaaacaatctgacta tattgcatgtaagttgaaataatttgctagttaactacaatacggggagtaaacgaagctgacttctcctttgcagtcat acgaatacgctgtaggcatcttcaaaaatttatccggacagcagatgtataaatctgaaagcaaaatgtcatactatctt ggtgccgaaaatgttccagaaggagaacgtatatatgttcgagagaatggtcagctctttatgataaatcaagcttcagg aaaaggaattagttatagtccaaattcaaggccttcaagattgttctccaaagaattctctgttgagctttgtgtcaaca aggaaaatgacaatggaaggacagatcactttatctttacttacacaaaggagggaagtcttcgttattctgctaagtct cttttcagtctagttctgagctatattgctgacaatattaattatgttgattcactgaatgactttccagaacagatagc agaaaagcttttctatgctgcagatgctaggcaaaaattcatggaatcaaaaacagggctgtttgctttgcagacgttca ctaatgcttatggatgcttagtgcttcagaaactatgcttgagaaatggttctctaattatctctgaaaaacttgaagaa attaaatctttccaaggtctgacacatttggatttgtcctgttgtaaacttggtgatgaccacgagctgctagagcatgt caccaatgaaagtctgtccagtttaactcatcttctcctgaaagataactgcttatcagatattgggcttcgcaaaatga cggcacgagttcgagtgatgaaaagaggccttgaaaatctctcagtattagatttgtccgataatccaggaatcacaaat aaaggagttcggtatctgtgtcctttcaagaagttgaactatttggatctctctgggacgggcctcagggacacaaaaga agtaattgatcaaatccagacactaacagacctagtccgttcgaagatccctttaaaagaatttgatcatagcagctgca aaacagaaggatgggcagagcaggttatcttgcagtggaaacatgctgtcctagaagtagttaacccaaaagaaagtata aaatctagactagcagctcaacatttctatggaaaaagacccagagcagaaggatctccagaatcactgttaggagaaaa gcaaagagaaaattatgagaacttgcagttctacaaagaaagaacagagatatcagataatcctttaccacaaagagaca tggaaatgatggaagaattaccaaagagaaggagaactgcaactgagcagaaaaaacagcatcttcaatcagaactcttt agcttttcacagacagaatgggacctgctaaactcttattgaataaagtaaatatttttgactaattggctgatgttcag ctttgtctctctgaacaaaaaaacttggaaaataaatgatgcattatatttttgcagt |
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| Transcript ID | habu1_s2740_g09760.t2 |
| Definition | - |
>habu1_s2740_g09760.t2 gttgcatacctcagagtgggtttggggaggctgctggttgttttcagtgttcccctgctgaaatcgaaacaatctgacta tattgcataaatctgaaagcaaaatgtcatactatcttggtgccgaaaatgttccagaaggagaacgtatatatgttcga gagaatggtcagctctttatgataaatcaagcttcaggaaaaggaattagttatagtccaaattcaaggccttcaagatt gttctccaaagaattctctgttgagctttgtgtcaacaaggaaaatgacaatggaaggacagatcactttatctttactt acacaaaggagggaagtcttcgttattctgctaagtctcttttcagtctagttctgagctatattgctgacaatattaat tatgttgattcactgaatgactttccagaacagatagcagaaaagcttttctatgctgcagatgctaggcaaaaattcat ggaatcaaaaacagggctgtttgctttgcagacgttcactaatgcttatggatgcttagtgcttcagaaactatgcttga gaaatggttctctaattatctctgaaaaacttgaagaaattaaatctttccaaggtctgacacatttggatttgtcctgt tgtaaacttggtgatgaccacgagctgctagagcatgtcaccaatgaaagtctgtccagtttaactcatcttctcctgaa agataactgcttatcagatattgggcttcgcaaaatgacggcacgagttcgagtgatgaaaagaggccttgaaaatctct cagtattagatttgtccgataatccaggaatcacaaataaaggagttcggtatctgtgtcctttcaagaagttgaactat ttggatctctctgggacgggcctcagggacacaaaagaagtaattgatcaaatccagacactaacagacctagtccgttc gaagatccctttaaaagaatttgatcatagcagctgcaaaacagaaggatgggcagagcaggttatcttgcagtggaaac atgctgtcctagaagtagttaacccaaaagaaagtataaaatctagactagcagctcaacatttctatggaaaaagaccc agagcagaaggatctccagaatcactgttaggagaaaagcaaagagaaaattatgagaacttgcagttctacaaagaaag aacagagatatcagataatcctttaccacaaagagacatggaaatgatggaagaattaccaaagagaaggagaactgcaa ctgagcagaaaaaacagcatcttcaatcagaactctttagcttttcacagacagaatgggacctgctaaactcttattga ataaagtaaatatttttgactaattggctgatgttcagctttgtctctctgaacaaaaaaacttggaaaataaatgatgc attatatttttgcagt |
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Protein
| Protein ID | habu1_s2740_g09760.t1 |
|---|---|
| Definition | - |
>habu1_s2740_g09760.t1 MSYYLGAENVPEGERIYVRENGQLFMINQASGKGISYSPNSRPSRLFSKEFSVELCVNKENDNGRTDHFIFTYTKEGSLR YSAKSLFSLVLSYIADNINYVDSLNDFPEQIAEKLFYAADARQKFMESKTGLFALQTFTNAYGCLVLQKLCLRNGSLIIS EKLEEIKSFQGLTHLDLSCCKLGDDHELLEHVTNESLSSLTHLLLKDNCLSDIGLRKMTARVRVMKRGLENLSVLDLSDN PGITNKGVRYLCPFKKLNYLDLSGTGLRDTKEVIDQIQTLTDLVRSKIPLKEFDHSSCKTEGWAEQVILQWKHAVLEVVN PKESIKSRLAAQHFYGKRPRAEGSPESLLGEKQRENYENLQFYKERTEISDNPLPQRDMEMMEELPKRRRTATEQKKQHL QSELFSFSQTEWDLLNSY |
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| Protein ID | habu1_s2740_g09760.t2 |
| Definition | - |
>habu1_s2740_g09760.t2 MSYYLGAENVPEGERIYVRENGQLFMINQASGKGISYSPNSRPSRLFSKEFSVELCVNKENDNGRTDHFIFTYTKEGSLR YSAKSLFSLVLSYIADNINYVDSLNDFPEQIAEKLFYAADARQKFMESKTGLFALQTFTNAYGCLVLQKLCLRNGSLIIS EKLEEIKSFQGLTHLDLSCCKLGDDHELLEHVTNESLSSLTHLLLKDNCLSDIGLRKMTARVRVMKRGLENLSVLDLSDN PGITNKGVRYLCPFKKLNYLDLSGTGLRDTKEVIDQIQTLTDLVRSKIPLKEFDHSSCKTEGWAEQVILQWKHAVLEVVN PKESIKSRLAAQHFYGKRPRAEGSPESLLGEKQRENYENLQFYKERTEISDNPLPQRDMEMMEELPKRRRTATEQKKQHL QSELFSFSQTEWDLLNSY |
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