Gene
| Gene Model ID | habu1_s27415_g22810 |
|---|---|
| Locus | habu1_scaffold27415 : 44193 ... 64025 : - |
| To GenomeBrowser | habu1_scaffold27415:44193..64025 |
| Genes list of scaffold | habu1_scaffold27415 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s27415_g22810.t1 | 1 | 1 | ApoO | 27 | 176 | 1.5e-35 | 122.2 | 1.5e-39 | 2.2e-35 | 121.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s27415_g22810.t1 | gi|602662127|ref|XP_007436709.1| | PREDICTED: apolipoprotein O isoform X1 [Python bivittatus] | 0.0 |
| habu1_s27415_g22810.t1 | gi|327268208|ref|XP_003218890.1| | PREDICTED: apolipoprotein O isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s27415_g22810.t1 | gi|699663509|ref|XP_009899082.1| | PREDICTED: apolipoprotein O [Picoides pubescens] | 0.0 |
| habu1_s27415_g22810.t1 | gi|729746284|ref|XP_010569597.1| | PREDICTED: apolipoprotein O isoform X1 [Haliaeetus leucocephalus] | 0.0 |
| habu1_s27415_g22810.t1 | gi|637282569|ref|XP_008105536.1| | PREDICTED: apolipoprotein O isoform X1 [Anolis carolinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 10.1 |
| Venom grand-1 | 14.4 |
| Pit, infrared sensing | 12.4 |
| Nose | 12.4 |
| Brain-1 | 6.8 |
| Eye | 8.3 |
| fetal fibroblast | 41.3 |
| venom gland-2 | 16.9 |
| Brain-2 | 7.1 |
| Spleen | 10.5 |
| Lung | 6.5 |
| Liver | 28.3 |
| Kidney | 36.7 |
| Pancreas | 18.8 |
| Small intestine | 21.9 |
| Large intestine | 14.4 |
| Stomach | 17.5 |
| heart | 39.6 |
| ovary | 52.7 |
| cheek muscle | 64.0 |
Transcript
| Transcript ID | habu1_s27415_g22810.t1 |
|---|---|
| Definition | - |
>habu1_s27415_g22810.t1 ggcttttgccattacagtacagtacccgtatatcaagcgcatgctttttacgtcatcagccctggctacacttcaggaga acacattttcaccgccatgttcaagataaggcagttgattgctgcacctggtaccttaagcttgcttgctgtacaggttt atgctgattctgctgagaataaatcttccaaaaagaacctactaaaggttgatgagctttcactctataccagtccatca ccaaaatcaaagtatgtggaagatccagagtcacaactggaagaaactatttctcatctgcggcattctttggagccata cgcagcttgggttcaggactgtactggtaaagttatgcctaaggtagaaaaggcctgtgaatatgttaaagagaattatg aaatcatcaaagctccacctccaggattttatccaaggcttggtgttataggtttcgctggtattgttggattgttcttg gcaagaggttccaaaattaaaagattggtgtacccgataagcttcatggggattggtactgctctctactatccacagca aacagttgctgttgccaaggtaactggcctccgcctatatgactggagtctacaagcatatataagcctagaatctcttt ggaaagatagttcaaaaaagaaaaggtctgcaaaagcaagtaacaagtccgatgcagaaagtgaaaaagaattgaaagta caagaagaaagagccgtaaaataaaatactccattactacttgttgaacagaatctatgaagattgaacatggtttgcca ctgtctttgctttggaaaagttgacttgaaaactgactgaataagaagtactatggttgtattctgccagctttggactt acggtcaaagttctgcatgattatcttagggtccttcaagacctgagtctctctctgaattcctgagcaatacttgcaaa gaaatacatttaattaaatgtaatgatatgtaatgctatatacatgtttaagattaggctgcaaattaaatctcaaaact tcttagacccttgttactgttcataggcttaattaaaatgaatattgaaaaacattgat |
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Protein
| Protein ID | habu1_s27415_g22810.t1 |
|---|---|
| Definition | - |
>habu1_s27415_g22810.t1 MFKIRQLIAAPGTLSLLAVQVYADSAENKSSKKNLLKVDELSLYTSPSPKSKYVEDPESQLEETISHLRHSLEPYAAWVQ DCTGKVMPKVEKACEYVKENYEIIKAPPPGFYPRLGVIGFAGIVGLFLARGSKIKRLVYPISFMGIGTALYYPQQTVAVA KVTGLRLYDWSLQAYISLESLWKDSSKKKRSAKASNKSDAESEKELKVQEERAVK |
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