Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s27415_g22811
Locus habu1_scaffold27415 : 64146 ... 102118 : +
To GenomeBrowser habu1_scaffold27415:64146..102118
Genes list of scaffold habu1_scaffold27415

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 1.3
Venom grand-1 0.0
Pit, infrared sensing 0.9
Nose 2.9
Brain-1 0.4
Eye 0.1
fetal fibroblast 0.2
venom gland-2 0.0
Brain-2 0.4
Spleen 0.0
Lung 0.2
Liver 0.0
Kidney 0.2
Pancreas 0.7
Small intestine 0.0
Large intestine 0.0
Stomach 0.0
heart 0.1
ovary 1.1
cheek muscle 0.1

Transcript
Transcript IDhabu1_s27415_g22811.t1
Definition-
>habu1_s27415_g22811.t1
gaagacgctgagaaaacgggtcttcgagcgaaagtgaggtatgatgtggaacgatacgcccttatcgccttccgtcctaa
atgaaaaggaaaaggaaaatcagagggttaaaagagagcaagcagctgtaaaaattcagaagaggtggtggatgcacatg
acaaaaagactatttaaacttctgaaacacacaattcgtgcagcggaatattgtattagctatgacattttaaaaagagt
gagtcctttggaagctgaacttcttaaagaacctactattcagtataaagtccgattcagatttgctggatctgatttcc
ccccttttattatatttaaaatattttgtaaatcaagaaccaaaaccaaccaatatatcagtgggaaaagagtaataaca
tcagaaagtaaggcagctgttgatgcttgcaaattaatgggatatcggacgtattataatcagattcttcaagatgaact
tcagaataaaaagcacggaataacagatgaaatagatattgctacaataagagattacatgcaatatgccagtcatatgg
atgaaactccagcatattatggtggcagacataattattggagaaggctgacattggaaaattggcctagagcaatgata
gtgtatgacatcatggattatgtacagtctgggaagctgtctgctagacttagagccgaacttccatttctgttgctgaa
accacagaatgaagagacatgtcgtgctcaaatcttggctgtttgtcaaattaggtctatgtcacctggtttcataacta
cttccctatcaagacaagaacaaaaagcagcccagagaatgtcacaacgccgctcttatcaagctagacagaagattgca
aaaatgaagaaagtttataaagctgtgaaagaagaggacttaagcagtccttctttgagtgatcattcagctggagatcc
agggcccaaaaatcaattttctaatgaagactgggagcaagaagcagtaatgctttacgattgggccagatcactccaaa
gtgaagatatttgggaagattaatcagagataaatgtattttttgtttaagcttctaccatttctatcatggttgcagca
acagttgaaattgtttttcccctatagttttttgctctttttgcagacataaccatggcagaagatgaatatacacaatt
ctctggctttaggaaattcctaacaaaacaagttactgttgatagaaagatgtgatattatgtcagaagaataaagtgat
gtagccagtgtacatct
Transcript IDhabu1_s27415_g22811.t2
Definition-
>habu1_s27415_g22811.t2
gaagacgctgagaaaacgggtcttcgagcgaaagtgaggtatgatgtggaacgatacgcccttatcgccttccgtcctaa
atgaaaaggaaaaggaaaatcagagggttaaaagagagcaagcagctgtaaaaattcagaagaggtggtggatgcacatg
acaaaaagactatttaaacttctgaaacacacaattcgtgcagcggaatattgtattagctatgacattttaaaaagagt
gagtcctttggaagctgaacttcttaaagaacctactattcagtataaagtccgattcagatttgctggatctgatttcc
ccccttttattatatttaaaatattttgtaaatcaagaaccaaaaccaaccaatatatcagtgggaaaagagtaataaca
tcagaaagtaaggcagctgttgatgcttgcaaattaatgggatatcggacgtattataatcagattcttcaagatgaact
tcagaataaaaagcacggaataacagatgaaatagatattgctacaataagagattacatgcaaaaaattaatggggaat
ccagcaagaaaggtcacagattgcagggtatgccagtcatatggatgaaactccagcatattatgtctgggaagctgtct
gctagacttagagccgaacttccatttctgttgctgaaaccacagaatgaagagacatgtcgtgctcaaatcttggctgt
ttgtcaaattaggtctatgtcacctggtttcataactacttccctatcaagacaagaacaaaaagcagcccagagaatgt
cacaacgccgctcttatcaagctagacagaagattgcaaaaatgaagaaagtttataaagctgtgaaagaagaggactta
agcagtccttctttgagtgatcattcagctggagatccagggcccaaaaatcaattttctaatgaagactgggagcaaga
agcagtaatgctttacgattgggccagatcactccaaagtgaagatatttgggaagattaatcagagataaatgtatttt
ttgtttaagcttctaccatttctatcatggttgcagcaacagttgaaattgtttttcccctatagttttttgctcttttt
gcagacataaccatggcagaagatgaatatacacaattctctggctttaggaaattcctaacaaaacaagttactgttga
tagaaagatgtgatattatgtcagaagaataaagtgatgtagccagtgtacatct
Transcript IDhabu1_s27415_g22811.t3
Definition-
>habu1_s27415_g22811.t3
gaagacgctgagaaaacgggtcttcgagcgaaagtgaggtatgatgtggaacgatacgcccttatcgccttccgtcctaa
atgaaaaggaaaaggaaaatcagagggttaaaagagagcaagcagctgtaaaaattcagaagaggtggtggatgcacatg
acaaaaagactatttaaacttctgaaacacacaattcgtgcagcgcaaaaacagcatccaaggacaaattcagaatattg
tattagctatgacattttaaaaagagtgagtcctttggaagctgaacttcttaaagaacctactattcagtataaagtcc
gattcagatttgctggatctgatttccccccttttattatatttaaaatattttgtaaatcaagaaccaaaaccaaccaa
tatatcagtgggaaaagagtaataacatcagaaagtaaggcagctgttgatgcttgcaaattaatgggatatcggacgta
ttataatcagattcttcaagatgaacttcagaataaaaagcacggaataacagatgaaatagatattgctacaataagag
attacatgcaatatgccagtcatatggatgaaactccagcatattatggtggcagacataattattggagaaggctgaca
ttggaaaattggcctagagcaatgatagtgtatgacatcatggattatgtacagtctgggaagctgtctgctagacttag
agccgaacttccatttctgttgctgaaaccacagaatgaagagacatgtcgtgctcaaatcttggctgtttgtcaaatta
ggtctatgtcacctggtttcataactacttccctatcaagacaagaacaaaaagcagcccagagaatgtcacaacgccgc
tcttatcaagctagacagaagattgcaaaaatgaagaaagtttataaagctgtgaaagaagaggacttaagcagtccttc
tttgagtgatcattcagctggagatccagggcccaaaaatcaattttctaatgaagactgggagcaagaagcagtaatgc
tttacgattgggccagatcactccaaagtgaagatatttgggaagattaatcagagataaatgtattttttgtttaagct
tctaccatttctatcatggttgcagcaacagttgaaattgtttttcccctatagttttttgctctttttgcagacataac
catggcagaagatgaatatacacaattctctggctttaggaaattcctaacaaaacaagttactgttgatagaaagatgt
gatattatgtcagaagaataaagtgatgtagccagtgtacatct

Protein
Protein IDhabu1_s27415_g22811.t1
Definition-
>habu1_s27415_g22811.t1
MMWNDTPLSPSVLNEKEKENQRVKREQAAVKIQKRWWMHMTKRLFKLLKHTIRAAEYCISYDILKRVSPLEAELLKEPTI
QYKVRFRFAGSDFPPFIIFKIFCKSRTKTNQYISGKRVITSESKAAVDACKLMGYRTYYNQILQDELQNKKHGITDEIDI
ATIRDYMQYASHMDETPAYYGGRHNYWRRLTLENWPRAMIVYDIMDYVQSGKLSARLRAELPFLLLKPQNEETCRAQILA
VCQIRSMSPGFITTSLSRQEQKAAQRMSQRRSYQARQKIAKMKKVYKAVKEEDLSSPSLSDHSAGDPGPKNQFSNEDWEQ
EAVMLYDWARSLQSEDIWED
Protein IDhabu1_s27415_g22811.t2
Definition-
>habu1_s27415_g22811.t2
MMWNDTPLSPSVLNEKEKENQRVKREQAAVKIQKRWWMHMTKRLFKLLKHTIRAAEYCISYDILKRVSPLEAELLKEPTI
QYKVRFRFAGSDFPPFIIFKIFCKSRTKTNQYISGKRVITSESKAAVDACKLMGYRTYYNQILQDELQNKKHGITDEIDI
ATIRDYMQKINGESSKKGHRLQGMPVIWMKLQHIMSGKLSARLRAELPFLLLKPQNEETCRAQILAVCQIRSMSPGFITT
SLSRQEQKAAQRMSQRRSYQARQKIAKMKKVYKAVKEEDLSSPSLSDHSAGDPGPKNQFSNEDWEQEAVMLYDWARSLQS
EDIWED
Protein IDhabu1_s27415_g22811.t3
Definition-
>habu1_s27415_g22811.t3
MMWNDTPLSPSVLNEKEKENQRVKREQAAVKIQKRWWMHMTKRLFKLLKHTIRAAQKQHPRTNSEYCISYDILKRVSPLE
AELLKEPTIQYKVRFRFAGSDFPPFIIFKIFCKSRTKTNQYISGKRVITSESKAAVDACKLMGYRTYYNQILQDELQNKK
HGITDEIDIATIRDYMQYASHMDETPAYYGGRHNYWRRLTLENWPRAMIVYDIMDYVQSGKLSARLRAELPFLLLKPQNE
ETCRAQILAVCQIRSMSPGFITTSLSRQEQKAAQRMSQRRSYQARQKIAKMKKVYKAVKEEDLSSPSLSDHSAGDPGPKN
QFSNEDWEQEAVMLYDWARSLQSEDIWED

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Chromosome
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495