Gene
| Gene Model ID | habu1_s27415_g22813 |
|---|---|
| Locus | habu1_scaffold27415 : 147866 ... 162938 : + |
| To GenomeBrowser | habu1_scaffold27415:147866..162938 |
| Genes list of scaffold | habu1_scaffold27415 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| eukaryotic translation initiation factor 2 subunit 3 | GO:0003924 GO:0005525 GO:0008152 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s27415_g22813.t1 | 1 | 1 | GTP_EFTU | 40 | 244 | 9.2e-40 | 136.0 | 5.10073e-43 | 1.5e-39 | 135.3 |
| habu1_s27415_g22813.t1 | 1 | 1 | GTP_EFTU_D2 | 276 | 359 | 5.8e-13 | 48.7 | 5.7e-16 | 1.7e-12 | 47.2 |
| habu1_s27415_g22813.t1 | 1 | 1 | eIF2_C | 368 | 459 | 1.2e-37 | 127.7 | 9.99995e-41 | 3.0e-37 | 126.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s27415_g22813.t1 | gi|602666373|ref|XP_007438762.1| | PREDICTED: eukaryotic translation initiation factor 2 subunit 3 [Python bivittatus] | 0.0 |
| habu1_s27415_g22813.t1 | gi|527266776|ref|XP_005151544.1| | PREDICTED: eukaryotic translation initiation factor 2 subunit 3 [Melopsittacus undulatus] | 0.0 |
| habu1_s27415_g22813.t1 | gi|729746292|ref|XP_010569599.1| | PREDICTED: eukaryotic translation initiation factor 2 subunit 3 [Haliaeetus leucocephalus] | 0.0 |
| habu1_s27415_g22813.t1 | gi|327268214|ref|XP_003218893.1| | PREDICTED: eukaryotic translation initiation factor 2 subunit 3 [Anolis carolinensis] | 0.0 |
| habu1_s27415_g22813.t1 | gi|543340096|ref|XP_005516755.1| | PREDICTED: eukaryotic translation initiation factor 2 subunit 3 [Pseudopodoces humilis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 34.7 |
| Venom grand-1 | 83.1 |
| Pit, infrared sensing | 50.8 |
| Nose | 45.1 |
| Brain-1 | 17.9 |
| Eye | 40.6 |
| fetal fibroblast | 116.6 |
| venom gland-2 | 85.1 |
| Brain-2 | 20.4 |
| Spleen | 38.3 |
| Lung | 55.4 |
| Liver | 103.6 |
| Kidney | 72.4 |
| Pancreas | 70.6 |
| Small intestine | 49.4 |
| Large intestine | 37.3 |
| Stomach | 51.4 |
| heart | 33.9 |
| ovary | 71.4 |
| cheek muscle | 69.5 |
Transcript
| Transcript ID | habu1_s27415_g22813.t1 |
|---|---|
| Definition | - |
>habu1_s27415_g22813.t1 ccgaccgaagaaaacgcgctctgctgctgtcatgcctttccttagacgccggttgcatcagccaggcccggggtcctttt tcagcagctcaccatattgcctgagccaactgcgaattctttccaaactcttccctggacaaagcaaggcggcaggatgt aactctgttcctagatattttgcagcatcgtctgggagtaagctgcgtgcctctgaaattactgggttctgtagggaaag atcaggcagtctcggcggactcctaacttcctttcaggaaagatggcggggactgaagcgggagtgacactggggcagcc gcacctttcccggcaagacctgactactttggatattacgaaattaacacctctgtctccagaagtcatcagtagacaag ctacaattaatataggtacaattggccatgtagctcatggaaaatcaacagtagtaaaagccatttctggagttcacaca gtcagattcaaaaatgaactggaaagaaatatcactatcaagcttggctatgccaatgctaagatttacaagcttgatga tccaaattgttcccgaccagaatgttaccgatcctgtggaagcagtacacctgatgaatttcctacagatattcctggga ccaaagggaattttaaactagtcagacatgtctcttttgtggattgtcctggccatgacattttgatggctactatgttg aatggagcagctgtcatggatgcagctttactgttaatagctggcaatgaatcatgtcctcagccacagacctcagaaca cttagctgctattgaaattatgaaactgaaacacattctaattctacagaataaaattgatttggtcaaagagagccaag ccaaagaacagtatgaacaaattctagcatttgtgcaaggtacagttgcagaaggagctccaattattccaatctcagca cagctaaaatacaacattgaagttgtttgtgaatacattgtaaagaaaattccagtgcctttaagagacttcacatcaga accaaggcttattgttattagatcttttgatgttaataagcctggatgtgaagttgatgacttgaagggaggtgtagctg gtggcagcattctcaaaggtgtattaaaggttggccaggaacttgaggtgagacctggcattgtctcaaaggatagtgaa ggaaaacttatgtgcaagcctattttctccaaaattgtatctctgtttgcagaacataatgatttgcaatatgctgtacc aggaggccttattggtgttggtaccaagattgacccaactttgtgccgagctgatcgaatggtagggcaggttttaggtg cagttgaagcactacctgaaatattcacagaacttgaaatttcctactttttgttgaggcgactactgggtgtccgtact gaaggtgacaagaaagctgccaaggtgcaaaaattatctaaaaatgaagtcctaatggtaaacataggatctctttcaac tggaggacgggtcagtgcggtgaaggctgatctggggaaaataatgctaactaatcctgtatgcactgaagtaggagaaa aaattgcccttagtcgaagagttgagaaacactggcgtttaattggatggggacagattagaagaggagtgacaatcaag cctactgtggatgatgactgaaagcaaaaaaaaagttcttcaatttgtaaagaatgatatgtgtttccatacaattggaa tgcattttcagtgagaaagctgttgcacagataatgtccacattgtattaaaaatcaaatctctcactaaaagtcttgac agtatctacaataaattaaacaaattggcaaagatagatctaattctccagtatttactaaaactaaatttgttttgtgt ttattttatgtcagtttttttagagacgggggctggctattttgattttaaacaatgtaactcaagaccccataatctga tttgaaattttgaaaattgcttgtttttttcatttaactcttataggtcatagagtaacaaaaaaaactgaaatgtttgt caatgaagcaaatttaaacaaataaacttttcttggaagatgaatttt |
|
Protein
| Protein ID | habu1_s27415_g22813.t1 |
|---|---|
| Definition | - |
>habu1_s27415_g22813.t1 MAGTEAGVTLGQPHLSRQDLTTLDITKLTPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVHTVRFKNELERNITIK LGYANAKIYKLDDPNCSRPECYRSCGSSTPDEFPTDIPGTKGNFKLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIA GNESCPQPQTSEHLAAIEIMKLKHILILQNKIDLVKESQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIV KKIPVPLRDFTSEPRLIVIRSFDVNKPGCEVDDLKGGVAGGSILKGVLKVGQELEVRPGIVSKDSEGKLMCKPIFSKIVS LFAEHNDLQYAVPGGLIGVGTKIDPTLCRADRMVGQVLGAVEALPEIFTELEISYFLLRRLLGVRTEGDKKAAKVQKLSK NEVLMVNIGSLSTGGRVSAVKADLGKIMLTNPVCTEVGEKIALSRRVEKHWRLIGWGQIRRGVTIKPTVDDD |
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