Gene
| Gene Model ID | habu1_s2789_g09953 |
|---|---|
| Locus | habu1_scaffold2789 : 1683 ... 20088 : + |
| To GenomeBrowser | habu1_scaffold2789:1683..20088 |
| Genes list of scaffold | habu1_scaffold2789 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| lethal giant larvae protein homolog 1 | GO:0006461 GO:0019901 GO:0030864 GO:0030866 GO:0035090 GO:0035748 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2789_g09953.t2 | 1 | 1 | LLGL | 249 | 353 | 7.00649e-45 | 151.3 | 0.0 | 1.26117e-44 | 150.5 |
| habu1_s2789_g09953.t2 | 1 | 1 | Lgl_C | 706 | 940 | 4.1e-07 | 28.8 | 5.5e-08 | 0.00027 | 19.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2789_g09953.t2 | gi|564268004|ref|XP_006272802.1| | PREDICTED: lethal(2) giant larvae protein homolog 1 [Alligator mississippiensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 8.5 |
| Venom grand-1 | 7.3 |
| Pit, infrared sensing | 9.5 |
| Nose | 5.4 |
| Brain-1 | 11.4 |
| Eye | 10.0 |
| fetal fibroblast | 11.2 |
| venom gland-2 | 10.4 |
| Brain-2 | 12.6 |
| Spleen | 3.6 |
| Lung | 14.1 |
| Liver | 19.0 |
| Kidney | 2.2 |
| Pancreas | 1.5 |
| Small intestine | 1.8 |
| Large intestine | 8.3 |
| Stomach | 5.1 |
| heart | 2.2 |
| ovary | 53.8 |
| cheek muscle | 7.2 |
Transcript
| Transcript ID | habu1_s2789_g09953.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g09953.t1 atggtggagcacggcttccccaatcagcccagctccttggcctttgaccccaagctgtgcattatggccatcggaaccaa atcgggagcaatcaaaatctacggtgctcccggggtggagttcacggggctgcacaaagagacagcaaccgtcactcaga tgcacttcctacctggacagggtctcctgctttcccttctggatgacaacaccctccacctctgggacatttaccagaaa gacggctactcccacctggaagagacccggagctttgtcctccccggacagccaggttctcctcccagcatcacccgggt gacggtgatcctcctggggtccaactgcagcatcgcctaccttggcactgaagggggtggcatctacttcctgggacttc ctggtctaacgctgctggagggcagcaccctgtaccaagatgaagtcctgcagagcgtgcctgaggactaccgatgcggg aaggcccttgggccggtagaatctcttcaggaacatcctcaagactcggcgagaatcctgattggatatagcagaggcct gatggtcgtgtgggacagaagctcaagagaagttcatcatctttttttgggcaaccagcaactggagagcgtcagctggg agcggagtggctggaccctggtcagttctcacagcgatgggggctacgccttgtggtcgatggcaaacggttcacccaag actctgcagccgacaacttccaccgtcccttatggtccgttcccctgcaaagccatcaacaagatcctgtggcagacctg cgactcggggggccacttcatcattttcagcggggggatgccccgggccagttacggggacaggcactgcgtgaccatcc tgcagggccaggccgtggtcacgctggacttcacatcacgggtgatcgacttcttcacggtgggcagcacggaggccgag gacgaattcgacaacccggcagctttggtggttctagtggaagaggagctggtggtgatcgatctgcagacgccgggctg gcccacgatccccgcgccctacctggcccctctccattcctcggccatcacctgttcctaccacatctccaatgtccccc tcaagctgtgggagaggatcatcagtgccggcgaacagcagagccctcgcctgtcctcggtgccttggcccatcgatgga gggcacccccttgctcaggaacccacccagagggggctgctcttgaccgggcatgaagatggcacggtgcgtttctggga tgcttccggagtatccctcaagccactatacaagctgggcacagccaacatcttccagatggactgtgaacacaatgaca gcttgaatcaatcctacgaggaggaatggcccccctttcggaaggttggctgcttcgacccttatagtgatgatccccgg ctgggtgtccagaagatcgctttgtgcaaatacacagctaagatggtggttgctggcacggcagggcaggtgctggtgat ggagtttaatgatgagaagtccgaacacatggtcaacattgctgtggtggacctactccaggaccgcgaaggcttcacgt ggaaggggcatgaccggctgcctcccaagaatggtgccttctcctttgcccccggtttccagcccagcgtcctcctgcag tgcctgccccccgcagctgtcacggctgtcaccctgcactcagagtggaacttggtggcctttggaaccagccacggctt tggcctgtatgactattaccgccggaaccctgtgctggccaggtgcactctgcaccccaatgattctctcgcaatggaag gccccctctcgcgagttaagtccctgaaaaagtccctgcgccagtccttccgtaggatccgtaagagccgcgtgtcgggc aaaaagagagtcacggccagtagcccctcaagcaaggtacaggaagcaaatgcccacctggctgagcaacctggtcccca tgaggtggagatggcacccgtccagcgacggattgaacctcgctcagcagacgattcactgtctggggttgtgcgttgcc tctactttgcagataccttcctccgagatgctgcacatcatggacccaccatgtgggccggcaccaattcaggctctgtc ttcgcctacgccctggaaatcccttcccaggagaagttttcggagcgctcggtggaggcggtcttgggcaaggagatcca gcttatgcaccgggcgccggtggtctcgatagccgtcctggatggccgagggaaccctctgccggagccctacgaggtct ctcgggacctggccaaagcccctgacctgcagggcagccactcggtcctcattgcctctgaagagcagttcaaggtcttc accctccccaaagtcagcgccaaaaccaagttcaagctgaccgcccacgagggttgccgtgtccggaaagtgggcttgat gagctttgccagcgccacctgcgacgagtacgcggagaacgggctggcctgcctcaccaacctgggcgacctgcacgtct tcacggtgcccagcctgaggccgcaggtccactacgactgcatccgcaaggaggacatcagcggcatcgcctcctgcgtc ttcaccaagtacggccaaggcttctatttgatctctccgtcagaattcgaacgcttctccttgagcactaggaacatcac cgaaccgctgtgtgtgctggagacgagccgcacccatgacagcatttccccaggaaataacttcacagcaacgccaaaac taagccaggccaacgggactcacgttttacaaggatcagaggctaatcattcccctgcaagcaacgatcggtctcccgaa gaccccccagcattgtttgcctcaacgccgatcgactcccccgacagcagcatcgacacccccttaaataccactggaga tattacagtcgaagaagtgaaggatttcttggcgccctccgaggaagccgagaggaatctgcggaacatcagtgaggagg aggcccgatctccagggatcctcattaaatgagggaccctgcactgtcccacgtgatgcttggacctttgggaccgagac ttctcgctgttcttgcaacaaactgttgg |
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| Transcript ID | habu1_s2789_g09953.t2 |
| Definition | - |
>habu1_s2789_g09953.t2 atggtggagcacggcttccccaatcagcccagctccttggcctttgaccccaagctgtgcattatggccatcggaaccaa atcgggagcaatcaaaatctacggtgctcccggggtggagttcacggggctgcacaaagagacagcaaccgtcactcaga tgcacttcctacctggacagggtctcctgctttcccttctggatgacaacaccctccacctctgggacatttaccagaaa gacggctactcccacctggaagagacccggagctttgtcctccccggacagccagggttcgacaacgctaattctcctcc cagcatcacccgggtgacggtgatcctcctggggtccaactgcagcatcgcctaccttggcactgaagggggtggcatct acttcctgggacttcctggtctaacgctgctggagggcagcaccctgtaccaagatgaagtcctgcagagcgtgcctgag gactaccgatgcgggaaggcccttgggccggtagaatctcttcaggaacatcctcaagactcggcgagaatcctgattgg atatagcagaggcctgatggtcgtgtgggacagaagctcaagagaagttcatcatctttttttgggcaaccagcaactgg agagcgtcagctgggagcggagtggctggaccctggtcagttctcacagcgatgggggctacgccttgtggtcgatggca aacggttcacccaagactctgcagccgacaacttccaccgtcccttatggtccgttcccctgcaaagccatcaacaagat cctgtggcagacctgcgactcggggggccacttcatcattttcagcggggggatgccccgggccagttacggggacaggc actgcgtgaccatcctgcagggccaggccgtggtcacgctggacttcacatcacgggtgatcgacttcttcacggtgggc agcacggaggccgaggacgaattcgacaacccggcagctttggtggttctagtggaagaggagctggtggtgatcgatct gcagacgccgggctggcccacgatccccgcgccctacctggcccctctccattcctcggccatcacctgttcctaccaca tctccaatgtccccctcaagctgtgggagaggatcatcagtgccggcgaacagcagagccctcgcctgtcctcggtgcct tggcccatcgatggagggcacccccttgctcaggaacccacccagagggggctgctcttgaccgggcatgaagatggcac ggtgcgtttctgggatgcttccggagtatccctcaagccactatacaagctgggcacagccaacatcttccagatggact gtgaacacaatgacagcttgaatcaatcctacgaggaggaatggcccccctttcggaaggttggctgcttcgacccttat agtgatgatccccggctgggtgtccagaagatcgctttgtgcaaatacacagctaagatggtggttgctggcacggcagg gcaggtgctggtgatggagtttaatgatgagaagtccgaacacatggtcaacattgctgtggtggacctactccaggacc gcgaaggcttcacgtggaaggggcatgaccggctgcctcccaagaatggtgccttctcctttgcccccggtttccagccc agcgtcctcctgcagtgcctgccccccgcagctgtcacggctgtcaccctgcactcagagtggaacttggtggcctttgg aaccagccacggctttggcctgtatgactattaccgccggaaccctgtgctggccaggtgcactctgcaccccaatgatt ctctcgcaatggaaggccccctctcgcgagttaagtccctgaaaaagtccctgcgccagtccttccgtaggatccgtaag agccgcgtgtcgggcaaaaagagagtcacggccagtagcccctcaagcaaggtacaggaagcaaatgcccacctggctga gcaacctggtccccatgaggtggagatggcacccgtccagcgacggattgaacctcgctcagcagacgattcactgtctg gggttgtgcgttgcctctactttgcagataccttcctccgagatgctgcacatcatggacccaccatgtgggccggcacc aattcaggctctgtcttcgcctacgccctggaaatcccttcccaggagaagttttcggagcgctcggtggaggcggtctt gggcaaggagatccagcttatgcaccgggcgccggtggtctcgatagccgtcctggatggccgagggaaccctctgccgg agccctacgaggtctctcgggacctggccaaagcccctgacctgcagggcagccactcggtcctcattgcctctgaagag cagttcaaggtcttcaccctccccaaagtcagcgccaaaaccaagttcaagctgaccgcccacgagggttgccgtgtccg gaaagtgggcttgatgagctttgccagcgccacctgcgacgagtacgcggagaacgggctggcctgcctcaccaacctgg gcgacctgcacgtcttcacggtgcccagcctgaggccgcaggtccactacgactgcatccgcaaggaggacatcagcggc atcgcctcctgcgtcttcaccaagtacggccaaggcttctatttgatctctccgtcagaattcgaacgcttctccttgag cactaggaacatcaccgaaccgctgtgtgtgctggagacgagccgcacccatgacagcatttccccaggaaataacttca cagcaacgccaaaactaagccaggccaacgggactcacgttttacaaggatcagaggctaatcattcccctgcaagcaac gatcggtctcccgaagaccccccagcattgtttgcctcaacgccgatcgactcccccgacagcagcatcgacaccccctt aaataccactggagatattacagtcgaagaagtgaaggatttcttggcgccctccgaggaagccgagaggaatctgcgga acatcagtgaggaggaggcccgatctccagggatcctcattaaatgagggaccctgcactgtcccacgtgatgcttggac ctttgggaccgagacttctcgctgttcttgcaacaaactgttgg |
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Protein
| Protein ID | habu1_s2789_g09953.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g09953.t1 MVEHGFPNQPSSLAFDPKLCIMAIGTKSGAIKIYGAPGVEFTGLHKETATVTQMHFLPGQGLLLSLLDDNTLHLWDIYQK DGYSHLEETRSFVLPGQPGSPPSITRVTVILLGSNCSIAYLGTEGGGIYFLGLPGLTLLEGSTLYQDEVLQSVPEDYRCG KALGPVESLQEHPQDSARILIGYSRGLMVVWDRSSREVHHLFLGNQQLESVSWERSGWTLVSSHSDGGYALWSMANGSPK TLQPTTSTVPYGPFPCKAINKILWQTCDSGGHFIIFSGGMPRASYGDRHCVTILQGQAVVTLDFTSRVIDFFTVGSTEAE DEFDNPAALVVLVEEELVVIDLQTPGWPTIPAPYLAPLHSSAITCSYHISNVPLKLWERIISAGEQQSPRLSSVPWPIDG GHPLAQEPTQRGLLLTGHEDGTVRFWDASGVSLKPLYKLGTANIFQMDCEHNDSLNQSYEEEWPPFRKVGCFDPYSDDPR LGVQKIALCKYTAKMVVAGTAGQVLVMEFNDEKSEHMVNIAVVDLLQDREGFTWKGHDRLPPKNGAFSFAPGFQPSVLLQ CLPPAAVTAVTLHSEWNLVAFGTSHGFGLYDYYRRNPVLARCTLHPNDSLAMEGPLSRVKSLKKSLRQSFRRIRKSRVSG KKRVTASSPSSKVQEANAHLAEQPGPHEVEMAPVQRRIEPRSADDSLSGVVRCLYFADTFLRDAAHHGPTMWAGTNSGSV FAYALEIPSQEKFSERSVEAVLGKEIQLMHRAPVVSIAVLDGRGNPLPEPYEVSRDLAKAPDLQGSHSVLIASEEQFKVF TLPKVSAKTKFKLTAHEGCRVRKVGLMSFASATCDEYAENGLACLTNLGDLHVFTVPSLRPQVHYDCIRKEDISGIASCV FTKYGQGFYLISPSEFERFSLSTRNITEPLCVLETSRTHDSISPGNNFTATPKLSQANGTHVLQGSEANHSPASNDRSPE DPPALFASTPIDSPDSSIDTPLNTTGDITVEEVKDFLAPSEEAERNLRNISEEEARSPGILIK |
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| Protein ID | habu1_s2789_g09953.t2 |
| Definition | - |
>habu1_s2789_g09953.t2 MVEHGFPNQPSSLAFDPKLCIMAIGTKSGAIKIYGAPGVEFTGLHKETATVTQMHFLPGQGLLLSLLDDNTLHLWDIYQK DGYSHLEETRSFVLPGQPGFDNANSPPSITRVTVILLGSNCSIAYLGTEGGGIYFLGLPGLTLLEGSTLYQDEVLQSVPE DYRCGKALGPVESLQEHPQDSARILIGYSRGLMVVWDRSSREVHHLFLGNQQLESVSWERSGWTLVSSHSDGGYALWSMA NGSPKTLQPTTSTVPYGPFPCKAINKILWQTCDSGGHFIIFSGGMPRASYGDRHCVTILQGQAVVTLDFTSRVIDFFTVG STEAEDEFDNPAALVVLVEEELVVIDLQTPGWPTIPAPYLAPLHSSAITCSYHISNVPLKLWERIISAGEQQSPRLSSVP WPIDGGHPLAQEPTQRGLLLTGHEDGTVRFWDASGVSLKPLYKLGTANIFQMDCEHNDSLNQSYEEEWPPFRKVGCFDPY SDDPRLGVQKIALCKYTAKMVVAGTAGQVLVMEFNDEKSEHMVNIAVVDLLQDREGFTWKGHDRLPPKNGAFSFAPGFQP SVLLQCLPPAAVTAVTLHSEWNLVAFGTSHGFGLYDYYRRNPVLARCTLHPNDSLAMEGPLSRVKSLKKSLRQSFRRIRK SRVSGKKRVTASSPSSKVQEANAHLAEQPGPHEVEMAPVQRRIEPRSADDSLSGVVRCLYFADTFLRDAAHHGPTMWAGT NSGSVFAYALEIPSQEKFSERSVEAVLGKEIQLMHRAPVVSIAVLDGRGNPLPEPYEVSRDLAKAPDLQGSHSVLIASEE QFKVFTLPKVSAKTKFKLTAHEGCRVRKVGLMSFASATCDEYAENGLACLTNLGDLHVFTVPSLRPQVHYDCIRKEDISG IASCVFTKYGQGFYLISPSEFERFSLSTRNITEPLCVLETSRTHDSISPGNNFTATPKLSQANGTHVLQGSEANHSPASN DRSPEDPPALFASTPIDSPDSSIDTPLNTTGDITVEEVKDFLAPSEEAERNLRNISEEEARSPGILIK |
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