Gene
| Gene Model ID | habu1_s2789_g09957 |
|---|---|
| Locus | habu1_scaffold2789 : 58336 ... 62293 : + |
| To GenomeBrowser | habu1_scaffold2789:58336..62293 |
| Genes list of scaffold | habu1_scaffold2789 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2789_g09957.t1 | 1 | 1 | Folliculin | 123 | 225 | 2.9e-06 | 26.9 | 3.5e-10 | 5.3e-06 | 26.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2789_g09957.t1 | gi|327287258|ref|XP_003228346.1| | PREDICTED: smith-Magenis syndrome chromosomal region candidate gene 8 protein [Anolis carolinensis] | 0.0 |
| habu1_s2789_g09957.t1 | gi|530590801|ref|XP_005289059.1| | PREDICTED: smith-Magenis syndrome chromosomal region candidate gene 8 protein [Chrysemys picta bellii] | 0.0 |
| habu1_s2789_g09957.t1 | gi|558178189|ref|XP_006126648.1| | PREDICTED: smith-Magenis syndrome chromosomal region candidate gene 8 protein isoform X1 [Pelodiscus sinensis] | 0.0 |
| habu1_s2789_g09957.t1 | gi|591370594|ref|XP_007060120.1| | PREDICTED: smith-Magenis syndrome chromosomal region candidate gene 8 protein [Chelonia mydas] | 0.0 |
| habu1_s2789_g09957.t1 | gi|729744612|ref|XP_010568691.1| | PREDICTED: smith-Magenis syndrome chromosomal region candidate gene 8 protein [Haliaeetus leucocephalus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.3 |
| Venom grand-1 | 3.1 |
| Pit, infrared sensing | 4.9 |
| Nose | 5.6 |
| Brain-1 | 4.8 |
| Eye | 5.2 |
| fetal fibroblast | 5.7 |
| venom gland-2 | 7.8 |
| Brain-2 | 4.8 |
| Spleen | 4.0 |
| Lung | 6.7 |
| Liver | 5.7 |
| Kidney | 4.3 |
| Pancreas | 3.8 |
| Small intestine | 5.0 |
| Large intestine | 3.8 |
| Stomach | 3.7 |
| heart | 4.5 |
| ovary | 34.9 |
| cheek muscle | 11.4 |
Transcript
| Transcript ID | habu1_s2789_g09957.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g09957.t1 cccgggcaggatgatcggcgcgcccgacgtgatggccttcgccaaggaggaggcggcggccgaggaggcggcggcggcag cggcgcgcgagccgggcctgcccgaggagtactcggtgccgctgctgcccgcgccaggccgcggcgcccacccgtggtcc cggcgaggcggcgcggggggcggcgcgggaggggctccgccgccgttcccgcgcgacttcctgctggtggccgagttctc ggagcaggtaggcccgcagccgctgctgacggtgccggccggggaggcgccgggcggcttcgacctcaactacttcgcgc tgcgcatcatgtcggtggactaccaggcctgcgcggcgggggcggccccgggaggcccgtacccgcgactgcgcttcgcc cgggactcgcaggtggtgctgggcgactccaaagcgggcgccttcgcctacgtgcaccacctgacgctctacgacctgga ggcgcgcggcttcgtgcggcccttctgcctggcctatgtgtcggccgacgagcgcaaggtcatgcgcctcttccctgagc tctccgcccagttctcgggcgcctccgaggtgctgaaggccggcaaccgcagggccttcgcccgcgagctggagaagaag ctgcgtgacctggactacacccgggctgtgctgcaccgtgagaccgagctgcagaagcgcagcctggccaagggctgcta ctccagccgggccatcgagaaggccaacgagctggccagcgtggagaaggccatcatcgagcaccgtgacctgctccggc agatccgatcctacccgcccggccggcggaagcagcccagcgggcctccctgcgagcctagcggggaggacgcccagccg gagttccccgttgatgatgatgcgttgcccccgccctgtccgccgggctcctcctacaccccaaagctcatcccagccaa gtccagcaagtgcttcgacaagaagctgaaaaccctccaggaactgtgcgaggagcactccttcaaccagaccctcgacc gcttgcatcggatcgagaagatgttccgcggcgatgtctgccacctcctgatcagccgcatcagcagagccctcttaaag cagcaggcctttgccagcttcctttttgaagacgtgtctcttctggacgaggagcagcaggaaaagccctttgaagtcgg tccaggacagaccttggaccgtcccaacattgcttgtttggaaagctgcccaagtcctgagatactagtcgaccttgcct cttacaaatccagtgtggagtctgtgctgattaagatggacccagaggttgaagagagtcaagacccagaggtcccccac cctgtcccttacgacagtgttgaccttctagatgtcgacctgaaagggagcgtcagcagtggcgaaagcattgaagtttt gggaacagagaaatcggccacaacttctgtgcactcggaaagtcagtctggcttgctacaagcgccacccagcccccctg gagtgagaaacaaagccgccagcaacaggaccataagcggggatagcattgaagtccttagcacctgcccctcggaggcc ctgatcccagacgattttaaagcgagctacccaagtgccattaatgaagatccttatggtggcgaagaagaggaaggctt cctgttcaaccacgagttaaatctggacagcaccgaagaggaggtggagggcagccctgcacctgaagctcctccggggg atgcttcttgctgcattggcaaagagagcccaaactttcttgagggtcaagccaatgtgcctcccaaacacgacaatgag gatggcgtggtcagcattcccccacagccgtacaggccaggcgacgcggggtttcaggtgaacttcacagactgctccca cgatggcgtcctgggaggcctccttgcctatgaactcgatcctcatttcctttgtgacggccgagaggccagtaaaatga gcctggataaatgctcggattccacgagtttcatgagcagtgcagcgtccaccaactccgacagaactccgtcccctgct gctctcacgggagaaaagtccaagaaggccgggcagagcgccttgcgcttcatccggcagtaccccttcgcccaccccgc tatctactctctgctgagcgggaggaccctggtggtgctgggagaagacaaggccactgtagagaagctcatcactgccc tctccatttttgtccccaattctggcgcttatgcaaagcccgtgaagcactgggccacctcgcctttgcagatcacggac tttcagaagtggaagctggtggggctccagaggtcaacctctccaggtggtcccaacatgatgcattctctcagccggta cagccgatacatcagtgtgctggacgccgaccacaagatcctccgctgtccgcagtaccgagggaacctgatcctccggc tggccgaccaccgcacccagatcaagcggggtagcacctaccacgtgcacgtccagaccctcctcacccagctctgctcc aaggccttcctctacgctttctgccatcacctgcacctccccatccgagagggagagacggaggactctgtgagcgcacg acgggagaacttcttgaaagtccagctgggtctggcaaatgaggaccgcaaagtggtccagtatctggctgagcttctga aattgcagtacattcaggatcccatccgcggggttagccctgtgctcaggttcgattacgtgcccagcgctttgtacaaa atttaggtggcatccagcctgtcctgccaatgtccctcccccatccaacattcttctgtgtctgttaacaggcttccacg gttccaggactgtcctgtgatcgcgtgggaaccctgagaacggtagagagtaaagggagaatccagacatttggca |
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Protein
| Protein ID | habu1_s2789_g09957.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g09957.t1 MAFAKEEAAAEEAAAAAAREPGLPEEYSVPLLPAPGRGAHPWSRRGGAGGGAGGAPPPFPRDFLLVAEFSEQVGPQPLLT VPAGEAPGGFDLNYFALRIMSVDYQACAAGAAPGGPYPRLRFARDSQVVLGDSKAGAFAYVHHLTLYDLEARGFVRPFCL AYVSADERKVMRLFPELSAQFSGASEVLKAGNRRAFARELEKKLRDLDYTRAVLHRETELQKRSLAKGCYSSRAIEKANE LASVEKAIIEHRDLLRQIRSYPPGRRKQPSGPPCEPSGEDAQPEFPVDDDALPPPCPPGSSYTPKLIPAKSSKCFDKKLK TLQELCEEHSFNQTLDRLHRIEKMFRGDVCHLLISRISRALLKQQAFASFLFEDVSLLDEEQQEKPFEVGPGQTLDRPNI ACLESCPSPEILVDLASYKSSVESVLIKMDPEVEESQDPEVPHPVPYDSVDLLDVDLKGSVSSGESIEVLGTEKSATTSV HSESQSGLLQAPPSPPGVRNKAASNRTISGDSIEVLSTCPSEALIPDDFKASYPSAINEDPYGGEEEEGFLFNHELNLDS TEEEVEGSPAPEAPPGDASCCIGKESPNFLEGQANVPPKHDNEDGVVSIPPQPYRPGDAGFQVNFTDCSHDGVLGGLLAY ELDPHFLCDGREASKMSLDKCSDSTSFMSSAASTNSDRTPSPAALTGEKSKKAGQSALRFIRQYPFAHPAIYSLLSGRTL VVLGEDKATVEKLITALSIFVPNSGAYAKPVKHWATSPLQITDFQKWKLVGLQRSTSPGGPNMMHSLSRYSRYISVLDAD HKILRCPQYRGNLILRLADHRTQIKRGSTYHVHVQTLLTQLCSKAFLYAFCHHLHLPIREGETEDSVSARRENFLKVQLG LANEDRKVVQYLAELLKLQYIQDPIRGVSPVLRFDYVPSALYKI |
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