Gene
| Gene Model ID | habu1_s2789_g09963 |
|---|---|
| Locus | habu1_scaffold2789 : 129019 ... 135565 : - |
| To GenomeBrowser | habu1_scaffold2789:129019..135565 |
| Genes list of scaffold | habu1_scaffold2789 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2789_g09963.t2 | 2 | 1 | SH3_1 | 5 | 49 | 1.0e-30 | 104.8 | 8.1e-19 | 2.4e-15 | 55.6 |
| habu1_s2789_g09963.t2 | 2 | 1 | SH3_9 | 5 | 54 | 1.0e-26 | 92.2 | 1.4e-15 | 4.2e-12 | 45.4 |
| habu1_s2789_g09963.t2 | 2 | 1 | SH3_2 | 6 | 54 | 1.1e-21 | 76.0 | 1.9e-10 | 5.5e-07 | 28.9 |
| habu1_s2789_g09963.t2 | 1 | 1 | SH2 | 60 | 135 | 3.3e-23 | 81.2 | 1.7e-26 | 5.0e-23 | 80.7 |
| habu1_s2789_g09963.t2 | 2 | 2 | SH3_2 | 162 | 212 | 1.1e-21 | 76.0 | 2.8e-15 | 8.4e-12 | 44.4 |
| habu1_s2789_g09963.t2 | 2 | 2 | SH3_1 | 164 | 208 | 1.0e-30 | 104.8 | 6.3e-16 | 1.9e-12 | 46.3 |
| habu1_s2789_g09963.t2 | 2 | 2 | SH3_9 | 165 | 212 | 1.0e-26 | 92.2 | 2.8e-15 | 8.2e-12 | 44.5 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.3 |
| Venom grand-1 | 0.2 |
| Pit, infrared sensing | 0.3 |
| Nose | 0.9 |
| Brain-1 | 0.1 |
| Eye | 0.2 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.1 |
| Brain-2 | 0.0 |
| Spleen | 17.5 |
| Lung | 0.4 |
| Liver | 0.5 |
| Kidney | 0.0 |
| Pancreas | 0.4 |
| Small intestine | 0.6 |
| Large intestine | 1.8 |
| Stomach | 0.0 |
| heart | 0.1 |
| ovary | 0.0 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s2789_g09963.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g09963.t1 ggaagccccctgggagaagaggagggaggaattcccctctgcgaggttgccttctgcaggtgcagcttctttcttcctca cacacccctccagcaaacatattcaaatacatttcctgtctcatttttacacacagatttttttcctcttctttttctgg cctcaaactacctcctgacccgtggctggaagtaaaactttggggtgctgctatacacagaagacaaaaggcaacccagc ctggaacttctcaaaaggaactccaggctggctttttcaacaggcctttgctggacaaccgagttgggccaaccaggctg gagaagtggcgtctttgaggtcttgctgtgggccagagaaggaccagcccccaaatggaagccctggctttgtataactt ccaagcgtccgagaaggatgaattggcctttaagaagggagacacgctcaagcttctgcctgatgtttgcttattcctcc ttttgagtccacagattctaaacatggaggaggaccagaattggtacaaagctgagctcttgggtttggaaggattcgtc cccaaaaattacatcaaaatgaaaccccatccgtggtattctggcaaaatctccaggcaaggcgccgaaaaggccctcct caaacgacggttccggggcgcctttctcatccgggagagcgaaagcagcccgggggatttctccatctctgtgaactacg gagaccaagtgttgcacttcaaagtcctccgggagaaaaagggcaagtaccacctctgggaggagaagttcaactccatc aatgaactggtggacttctaccgaaccaccaccatcgccaagaagaggcaggtcttcctgagagaccatggagaagccga ggagcccaagaagccaacgtttgtccaagcccagttcgacttcttggccgagaacccctcacagctgagcttctgcagag gagacatcctcaagattctggactgctctgacccccattggtggagagggaagctgggggtgaaaatcggccttttccct cggaactacgttttccccctgcgcatgtgagctgcctggctcgctcgcagatgtgatcagccgtcccatctggacttttt ctcctcttgcacaaaggcaaacgatgctccgtctcacccctggccagagccaggcaaacttttcattttcacattccgat cttaaaagaggcgcattgcacacccaaatggcccttcagaagccgagactttgggattcatcgccggttgaaatactttg cagactgatccccatcactggagcccaaacaaacctctggatatttttaattattttgttttataaaacaatatattttt agaagtaaaactgcaat |
|
| Transcript ID | habu1_s2789_g09963.t2 |
| Definition | - |
>habu1_s2789_g09963.t2 ggaagccccctgggagaagaggagggaggaattcccctctgcgaggttgccttctgcaggtgcagcttctttcttcctca cacacccctccagcaaacatattcaaatacatttcctgtctcatttttacacacagatttttttcctcttctttttctgg cctcaaactacctcctgacccgtggctggaagtaaaactttggggtgctgctatacacagaagacaaaaggcaacccagc ctggaacttctcaaaaggaactccaggctggctttttcaacaggcctttgctggacaaccgagttgggccaaccaggctg gagaagtggcgtctttgaggtcttgctgtgggccagagaaggaccagcccccaaatggaagccctggctttgtataactt ccaagcgtccgagaaggatgaattggcctttaagaagggagacacgctcaagattctaaacatggaggaggaccagaatt ggtacaaagctgagctcttgggtttggaaggattcgtccccaaaaattacatcaaaatgaaaccccatccgtggtattct ggcaaaatctccaggcaaggcgccgaaaaggccctcctcaaacgacggttccggggcgcctttctcatccgggagagcga aagcagcccgggggatttctccatctctgtgaactacggagaccaagtgttgcacttcaaagtcctccgggagaaaaagg gcaagtaccacctctgggaggagaagttcaactccatcaatgaactggtggacttctaccgaaccaccaccatcgccaag aagaggcaggtcttcctgagagaccatggagaagccgaggagcccaagaagccaacgtttgtccaagcccagttcgactt cttggccgagaacccctcacagctgagcttctgcagaggagacatcctcaagattctggactgctctgacccccattggt ggagagggaagctgggggtgaaaatcggccttttccctcggaactacgttttccccctgcgcatgtgagctgcctggctc gctcgcagatgtgatcagccgtcccatctggactttttctcctcttgcacaaaggcaaacgatgctccgtctcacccctg gccagagccaggcaaacttttcattttcacattccgatcttaaaagaggcgcattgcacacccaaatggcccttcagaag ccgagactttgggattcatcgccggttgaaatactttgcagactgatccccatcactggagcccaaacaaacctctggat atttttaattattttgttttataaaacaatatatttttagaagtaaaactgcaat |
|
Protein
| Protein ID | habu1_s2789_g09963.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g09963.t1 MEALALYNFQASEKDELAFKKGDTLKLLPDVCLFLLLSPQILNMEEDQNWYKAELLGLEGFVPKNYIKMKPHPWYSGKIS RQGAEKALLKRRFRGAFLIRESESSPGDFSISVNYGDQVLHFKVLREKKGKYHLWEEKFNSINELVDFYRTTTIAKKRQV FLRDHGEAEEPKKPTFVQAQFDFLAENPSQLSFCRGDILKILDCSDPHWWRGKLGVKIGLFPRNYVFPLRM |
|
| Protein ID | habu1_s2789_g09963.t2 |
| Definition | - |
>habu1_s2789_g09963.t2 MEALALYNFQASEKDELAFKKGDTLKILNMEEDQNWYKAELLGLEGFVPKNYIKMKPHPWYSGKISRQGAEKALLKRRFR GAFLIRESESSPGDFSISVNYGDQVLHFKVLREKKGKYHLWEEKFNSINELVDFYRTTTIAKKRQVFLRDHGEAEEPKKP TFVQAQFDFLAENPSQLSFCRGDILKILDCSDPHWWRGKLGVKIGLFPRNYVFPLRM |
|