Gene
| Gene Model ID | habu1_s2789_g09964 |
|---|---|
| Locus | habu1_scaffold2789 : 150516 ... 164672 : + |
| To GenomeBrowser | habu1_scaffold2789:150516..164672 |
| Genes list of scaffold | habu1_scaffold2789 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| epsin-2 isoform x1 | GO:0006897 GO:0030128 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2789_g09964.t2 | 1 | 1 | ENTH | 8 | 131 | 0.0 | 183.3 | 0.0 | 0.0 | 183.3 |
| habu1_s2789_g09964.t2 | 1 | 1 | ANTH | 10 | 116 | 8.5e-07 | 27.9 | 4.2e-10 | 1.2e-06 | 27.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2789_g09964.t2 | gi|557282341|ref|XP_006024092.1| | PREDICTED: epsin-2 isoform X3 [Alligator sinensis] | 0.0 |
| habu1_s2789_g09964.t2 | gi|558127593|ref|XP_006115589.1| | PREDICTED: epsin-2 isoform X2 [Pelodiscus sinensis] | 0.0 |
| habu1_s2789_g09964.t2 | gi|557282339|ref|XP_006024091.1| | PREDICTED: epsin-2 isoform X2 [Alligator sinensis] | 0.0 |
| habu1_s2789_g09964.t2 | gi|557282337|ref|XP_006024090.1| | PREDICTED: epsin-2 isoform X1 [Alligator sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 9.9 |
| Venom grand-1 | 5.9 |
| Pit, infrared sensing | 7.2 |
| Nose | 8.2 |
| Brain-1 | 10.0 |
| Eye | 8.9 |
| fetal fibroblast | 8.3 |
| venom gland-2 | 5.3 |
| Brain-2 | 11.9 |
| Spleen | 5.9 |
| Lung | 12.1 |
| Liver | 6.7 |
| Kidney | 6.4 |
| Pancreas | 5.0 |
| Small intestine | 2.6 |
| Large intestine | 5.5 |
| Stomach | 4.5 |
| heart | 73.8 |
| ovary | 9.3 |
| cheek muscle | 14.0 |
Transcript
| Transcript ID | habu1_s2789_g09964.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g09964.t1 aatccctgaggactttcgggaggaatctgccttgacacggagcaggagataaaaatgacaacttcgtcgattaggcggca gatgaaaaacattgtgaacaattattcagaggccgaaattaaagtccgggaagcaacgtccaatgacccctggggtccct ccagctccttaatgaccgaaattgcagacctgacttacaacgtggtagccttctctgaaatcatgagcatgatctggaag cggctgaacgaccacggcaagaactggaggcacgtttacaaggctttaaccctgctggattacctgatcaaaactgggtc agagcgggtggcccagcagtgcaaagagaacatctttgccatccagactttgaaagattttcagtacattgaccgggatg ggaaggaccagggcatcaacgtgcgtgagaagtccaagcaattggtctccctgctgaaggacgatgagcggctcaaggcg gagagggcccaggccctaaagaccaaagagcgcatggctcaagtggccatcggagtgggcagcaaccagatctcctttgg cagagggtccagccagcctaatctgtccaccagctactctgagcaagagtacggcaaatctggaggctctccagcttcct accatgggtctacatcaccaagagtgtcttcagaactggagcaggcccgacctcagaccagcggggaagaggaactccag ctgcagctggctttggccatgagcagagaagtggcagaacaggaagagcgcctgcgccgcggagacgatttgaggttgca gatggccttggaagaaagtcgtagagatactgtcagaattcccaaaaagaaggagcacgcagctttgctggacctcatgg atgcgctgccctcttccgccacccccgccccaaaaggggagccttggaagcccccagctgcagtcaacaaagctgaccct tgggggggtcctccagtcagcactgccacctccgatccatggcaatcgttcggtgccaagccagccacctctgttgatcc gtggggagcccctgcaacatcctcagctgcccagcctctcccaaagaatgccgatccttgggctccttcccagccctcgt ccgtggcaacaaagacagccgtggacccctggggaccagcaccagtaaacaagccaatttctgcttctggtagtaaatct ttcgacctcttcagcaatttgaacgggacaattaaagacgacttttctgaatttgacacccttcgaacttctaacaagca aggttctgctttgtcagctcagaacagtgggaccaccagccccgacctctcagactccctgccagccagctcctcctcct ccagtaaacagagcggcgctcggaggacccccgagtctttcttgggccccaatgctgctttggtgaatctggactccctg gtatctaagcccccccagccagcaccgtccctcaatcctttcttggctccgggatcgtcgtcgtcatcgtcggcttctcc ttctccggccgcagtcaaccccttccaagtgaatcagccgcagcccctcactctcaatcagatgcgggccagccccatcc tcggggcgatccctctgttcgtgatcctcttagcctgcaaaccagagaggagctggcatttcctgaaaaaatcagctgga taaacatgatgagaacagcaagttccatgcagatgaggaaaataggttaatagagggaagctcttggcgcccagcacttc ctttctgggagagccgttggcagttggtggccacaaaccagggatcccctgcttctatgacgacttgaaaaatgatctgg tcggttggcttttgtggccaggagaagaattgaggcagcctgggatatcggtgagaacatctttaaaacggccagcgttg gttcggcttatgtgcccccactctgcatccggactggctcttcttcatagcagatccacttctaaaaccgccccccccat ttctgcgggagcttgttttgcagtgtaagacgggccacgtatattgtatattttgtatattcctctttggaattagcaca gcaataaatttaacactcccatctgtctgt |
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| Transcript ID | habu1_s2789_g09964.t2 |
| Definition | - |
>habu1_s2789_g09964.t2 aatccctgaggactttcgggaggaatctgccttgacacggagcaggagataaaaatgacaacttcgtcgattaggcggca gatgaaaaacattgtgaacaattattcagaggccgaaattaaagtccgggaagcaacgtccaatgacccctggggtccct ccagctccttaatgaccgaaattgcagacctgacttacaacgtggtagccttctctgaaatcatgagcatgatctggaag cggctgaacgaccacggcaagaactggaggcacgtttacaaggctttaaccctgctggattacctgatcaaaactgggtc agagcgggtggcccagcagtgcaaagagaacatctttgccatccagactttgaaagattttcagtacattgaccgggatg ggaaggaccagggcatcaacgtgcgtgagaagtccaagcaattggtctccctgctgaaggacgatgagcggctcaaggcg gagagggcccaggccctaaagaccaaagagcgcatggctcaagtggccatcggagtgggcagcaaccagatctcctttgg cagagggtccagccagcctaatctgtccaccagctactctgagcaagagtacggcaaatctggaggctctccagcttcct accatgggtctacatcaccaagagtgtcttcagaactggagcaggcccgacctcagaccagcggggaagaggaactccag ctgcagctggctttggccatgagcagagaagtggcagaacaggaagagcgcctgcgccgcggagacgatttgaggttgca gatggccttggaagaaagtcgtagagatactgtcagaattcccaaaaagaaggagcacgcagctttgctggacctcatgg atgcgctgccctcttccgccacccccgccccaaaaggggagccttggaagcccccagctgcagtcaacaaagctgaccct tgggggggtcctccagtcagcactgccacctccgatccatggcaatcgttcggtgccaagccagccacctctgttgatcc gtggggagcccctgcaacatcctcagctgcccagcctctcccaaagaatgccgatccttgggctccttcccagccctcgt ccgtggcaacaaagacagccgtggacccctggggaccagcaccagtaaacaagccaatttctgcttctggtagtaaatct ttcgacctcttcagcaatttgaacgggacaattaaagacgacttttctgaatttgacacccttcgaacttctaacaagca aggatcgtcgtcgtcatcgtcggcttctccttctccggccgcagtcaaccccttccaagtgaatcagccgcagcccctca ctctcaatcagatgcgggccagccccatcctcggggcgatccctctgttcgtgatcctcttagcctgcaaaccagagagg agctggcatttcctgaaaaaatcagctggataaacatgatgagaacagcaagttccatgcagatgaggaaaataggttaa tagagggaagctcttggcgcccagcacttcctttctgggagagccgttggcagttggtggccacaaaccagggatcccct gcttctatgacgacttgaaaaatgatctggtcggttggcttttgtggccaggagaagaattgaggcagcctgggatatcg gtgagaacatctttaaaacggccagcgttggttcggcttatgtgcccccactctgcatccggactggctcttcttcatag cagatccacttctaaaaccgccccccccatttctgcgggagcttgttttgcagtgtaagacgggccacgtatattgtata ttttgtatattcctctttggaattagcacagcaataaatttaacactcccatctgtctgt |
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Protein
| Protein ID | habu1_s2789_g09964.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g09964.t1 MKNIVNNYSEAEIKVREATSNDPWGPSSSLMTEIADLTYNVVAFSEIMSMIWKRLNDHGKNWRHVYKALTLLDYLIKTGS ERVAQQCKENIFAIQTLKDFQYIDRDGKDQGINVREKSKQLVSLLKDDERLKAERAQALKTKERMAQVAIGVGSNQISFG RGSSQPNLSTSYSEQEYGKSGGSPASYHGSTSPRVSSELEQARPQTSGEEELQLQLALAMSREVAEQEERLRRGDDLRLQ MALEESRRDTVRIPKKKEHAALLDLMDALPSSATPAPKGEPWKPPAAVNKADPWGGPPVSTATSDPWQSFGAKPATSVDP WGAPATSSAAQPLPKNADPWAPSQPSSVATKTAVDPWGPAPVNKPISASGSKSFDLFSNLNGTIKDDFSEFDTLRTSNKQ GSALSAQNSGTTSPDLSDSLPASSSSSSKQSGARRTPESFLGPNAALVNLDSLVSKPPQPAPSLNPFLAPGSSSSSSASP SPAAVNPFQVNQPQPLTLNQMRASPILGAIPLFVILLACKPERSWHFLKKSAG |
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| Protein ID | habu1_s2789_g09964.t2 |
| Definition | - |
>habu1_s2789_g09964.t2 MKNIVNNYSEAEIKVREATSNDPWGPSSSLMTEIADLTYNVVAFSEIMSMIWKRLNDHGKNWRHVYKALTLLDYLIKTGS ERVAQQCKENIFAIQTLKDFQYIDRDGKDQGINVREKSKQLVSLLKDDERLKAERAQALKTKERMAQVAIGVGSNQISFG RGSSQPNLSTSYSEQEYGKSGGSPASYHGSTSPRVSSELEQARPQTSGEEELQLQLALAMSREVAEQEERLRRGDDLRLQ MALEESRRDTVRIPKKKEHAALLDLMDALPSSATPAPKGEPWKPPAAVNKADPWGGPPVSTATSDPWQSFGAKPATSVDP WGAPATSSAAQPLPKNADPWAPSQPSSVATKTAVDPWGPAPVNKPISASGSKSFDLFSNLNGTIKDDFSEFDTLRTSNKQ GSSSSSSASPSPAAVNPFQVNQPQPLTLNQMRASPILGAIPLFVILLACKPERSWHFLKKSAG |
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