Gene
| Gene Model ID | habu1_s2789_g09966 |
|---|---|
| Locus | habu1_scaffold2789 : 175193 ... 314805 : - |
| To GenomeBrowser | habu1_scaffold2789:175193..314805 |
| Genes list of scaffold | habu1_scaffold2789 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| voltage-dependent t-type calcium channel subunit alpha-1h | GO:0005245 GO:0005891 GO:0006694 GO:0006816 GO:0034220 GO:0042181 GO:0046165 GO:0050794 GO:0051049 GO:0065008 GO:0070887 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2789_g09966.t1 | 4 | 1 | Ion_trans | 144 | 411 | 0.0 | 663.8 | 0.0 | 0.0 | 194.5 |
| habu1_s2789_g09966.t1 | 4 | 2 | Ion_trans | 845 | 1030 | 0.0 | 663.8 | 0.0 | 1.80067e-42 | 144.8 |
| habu1_s2789_g09966.t1 | 3 | 1 | PKD_channel | 902 | 1036 | 6.2e-15 | 54.5 | 1.1e-06 | 0.0041 | 15.6 |
| habu1_s2789_g09966.t1 | 4 | 3 | Ion_trans | 1356 | 1578 | 0.0 | 663.8 | 0.0 | 0.0 | 187.7 |
| habu1_s2789_g09966.t1 | 3 | 2 | PKD_channel | 1647 | 1717 | 6.2e-15 | 54.5 | 2.7e-08 | 9.9e-05 | 20.9 |
| habu1_s2789_g09966.t1 | 4 | 4 | Ion_trans | 1669 | 1876 | 0.0 | 663.8 | 0.0 | 0.0 | 156.6 |
| habu1_s2789_g09966.t1 | 3 | 3 | PKD_channel | 1737 | 1882 | 6.2e-15 | 54.5 | 3.8e-12 | 1.4e-08 | 33.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2789_g09966.t1 | gi|557282385|ref|XP_006024113.1| | PREDICTED: voltage-dependent T-type calcium channel subunit alpha-1H [Alligator sinensis] | 0.0 |
| habu1_s2789_g09966.t1 | gi|591370612|ref|XP_007060129.1| | PREDICTED: voltage-dependent T-type calcium channel subunit alpha-1H-like [Chelonia mydas] | 0.0 |
| habu1_s2789_g09966.t1 | gi|558127584|ref|XP_006115587.1| | PREDICTED: LOW QUALITY PROTEIN: voltage-dependent T-type calcium channel subunit alpha-1H [Pelodiscus sinensis] | 0.0 |
| habu1_s2789_g09966.t1 | gi|641800217|ref|XP_008162982.1| | PREDICTED: voltage-dependent T-type calcium channel subunit alpha-1H isoform X2 [Chrysemys picta bellii] | 0.0 |
| habu1_s2789_g09966.t1 | gi|641800215|ref|XP_008162981.1| | PREDICTED: voltage-dependent T-type calcium channel subunit alpha-1H isoform X1 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.5 |
| Venom grand-1 | 0.2 |
| Pit, infrared sensing | 0.4 |
| Nose | 0.2 |
| Brain-1 | 4.1 |
| Eye | 2.4 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 2.9 |
| Spleen | 0.4 |
| Lung | 1.9 |
| Liver | 0.1 |
| Kidney | 0.4 |
| Pancreas | 0.1 |
| Small intestine | 0.2 |
| Large intestine | 1.3 |
| Stomach | 1.4 |
| heart | 0.3 |
| ovary | 0.4 |
| cheek muscle | 0.3 |
Transcript
| Transcript ID | habu1_s2789_g09966.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g09966.t1 aagctgggcctttcagcatcacctctctccaaaacgcaaacaaattaaatgggccaagggctaccggtactttcccccgg ccacgatgacacatgctggtgtgtggcagactttgtcaagttctattggcaaaaggagccaaggagggctgtgcatccct ttgcagtgctcgtgcctttgatccaggcagcatctttgaaggagagctgaaggagccagctgctatcatgactgatggcg agaggagagcttccttccagccactgtccagggatgaagtgcgggtccccatagcgtctggccaagcccccagccaggtc ccccaatctggagaggagaaagatgaggataccttcagcgcttgcaagtccatccaggacagtttggcctcagcagattc atccacccgggatccagcccatgagggagacaaccagatcccctaccctgcactggcctccaccgtcttcttctgcttca gccagactacgcgaccacgcagctggtgcctcaaactggcatttgatcacttcatcttcgccttctttgctgtggagatg gttatcaagatggtcgccctggggatctttggccacaaatgttacctaggagacacctggaaccgcctcgacttcttcat tgtcattgctggcatgatggaatattctctggatggacataatgtcagcctttcagccatccggactgtgcgggttctca ggccgttacgagccattaacagggtgccaagtatgcgcattcttgtcaccctgctcctagacactctgcctatgttaggc aacgttctcctcttgtgtttctttgtctttttcatcttcggcatcgtgggtgtccagctctgggccgggctgctgagaaa caggtgtttcctagattcccacattcaaaggacacacaacctgactttcctgcataaatactacaggccggaagaggggg aggagaacccgttcatctgttcctccctccgggataacggcatgcagaagtgctccagcatcccaaaccggagggagtac aagatggactgtactttaaccatggacgcttacaatccgcatttggactcgctggacttgggcagtcgcaacgcctgcat aaactggaaccaatattacaatgcttgcaggacgggggacttaaacccgcacaatggagctattaattttgataatattg gctatgcttggatagctatttttcaggttataaccctggaaggatgggttgacatcatgtattatgttatggacgcacac tctttttacaattttatatattttatactacttataatagtcagcccaacacacccggtcatgaagagtggaccgaggtt aactttagccaagttgtgtatggttggttctttcttcatgattaacctgtgcctggttgtgatagcaacacagttttctg aaaccaaacagcgggagaaccagctgatgcaagagcagcgagcccgctacctctctaacgacagcacaatcgccagcttc tctgagccgggaagctgctatgaagagttcctcaaatacatttgccacattttcaggaaagtcaaacggcggaccttgcg cctgtacaacaactggcagagcaagcgtcggaaaaaagtcaaccccaacagtggtggagacaatggtcagggccagcaga gcggcaagcgacgcatcacgtccatccatcacttgatccaccaccaccatcaccaccaccatcaccactaccacatcggc aacgggagcccccaagggccaaggtccaacccagggatttgtgacctggagctggacgtcataaagcctggaggccaact gatgcttcctccaccttcgcccagccacccaggtggtagagctgcagatacggagtccatccacagtatttaccatgccg actgccacgtggaaggaacctcagtgaaatgcaagtcttccagcattgctgcaggtagcaaagctgccaatcgtggcagc atgaactaccccaccatcttgccttctccggcaaacaaagccagtgtccctcccttgaccaaagggaagaaaaatgaggg cagtgaggtgacctctcccatgcccatggtcagcagcccagcccatctaaatgcagattgttatgggaagctccatcatc tggtgggagaacgtggcctctgccggacctccagcattctgtctggcctgaacgtgccatgtcccttgcctgggcctcaa gccaacaccctgagctgtgagctgcaaaactgcccattctgtgccagcatccttgaggatcctgagtttgagtttagcga ggcagacagctatgagtcaggagaggacaacaatgggatctacgagttcacccaggatgtaaagcatggggatttccggg accagatccagcagcagaggaacaagaaaaagaagaaaaggaaaccagccaaggagaggaacaagctaaccaaggtctgg aaggcctttggcaacaagctaaaacggatcgtggagagcaagtatttcaaccgtggcatcatgatcgccatcctcatcaa cacgctgagcatgggcattgagtatcatgaacagccggatgagctcaccaatgccctggagattagtaacattgtcttca caagcatgtttgctctggagatgctgctcaagcttttggcttttggcatctggggatacatcaagaacccctacaacatt tttgacggcatcattgttgtcatcagtgtctgggagatcattggccaggccgacgggggtctttcagtgctgaggacctt ccgtctcctccgggtcctcaagctggtgcggttcatgccggctctccgccggcagttggtggttctcatgaagaccatgg acaatgtggccaccttctgcatgctgctcatgctttttatcttcatcttcagcatcctcggtatgcatctttttgggtgc aagtttggcttaaggacagagacaggagacaccatgccagaccgaaagaactttgattccctgctgtgggcaattgtcac cgtgtttcagatcctgacccaggaagactggaatgtggtcctctacaacggaatggcctccacctcctcctgggctgctc tctactttgtggctctgatgacctttggcaactatgtcctcttcaacctcttggtcgccatcctggtggaaggtttccaa gctgagggcgatgccaacagatctgacacagacgaagacaaaacatcgaccaactttgaggaagagtttgagaagctgaa ggaactccgtgcttctgagatgaagctgtattcgctggctgtcacgcccaatggacacctggagggcaagggcagcatgc ccccgcccatcatcatgcacaccgcagccacccccatgcccaccccaaaggggtctccacacatggactccgcctaccct tttggggactccaggaggggcagcaacgtttcggtggacccgcttaactttgaccagaaatctttgtccagcctccgcag ctccccctgtgccaactggggcagccgccgctcaagctggaacagcctgggccgggcccccagcctcaagaagaagagcc agtgtggcgagcgggagtccttgctctcgggggagggcaaaggcagcacggacgatgaagctgaggagaccaagctcagc accctcagccgccgccccctgcaccaccgggcagagtccctggactgccggggtggcttggacctgccagaactcctcca ggtgcccggagtgcacccaccggtagccatgctgcccctcgagtaccaggactgcaacggcaagatgctgcaggtgccca gcgagttctacctgcacctggacagccgcaaagaggatcccttcgactacgatgagaacatggaagataacttctgctac agaatccgcaagaccttggagccctacaagcccaaatggtgcaagaatcatgaggactggtccctctacttgttttctcc ccagaatcgcctccgggccaactgccagaaagtcatcgcacacaagatgtttgaccacgtggtcctggttttcatcttcc tcaactgcatcaccatcgccttggaacgcccggacatcgatcccaacagcacggaacggatattcttgagtgtctccaac tacatctttacggccatttttgttgctgagatgatggttaaggttgtggctctcggcttcttctccggggaacacaccta cctccagagcagctggaacgtcctggatggcatcctggtctttgtgtccatcattgacatcatcgtttccatggcatcag caggtggagccaagattttagggatcctacgagtacttcggctgctgcgcaccttaagacctttacgggtcatcagcaga gctccaggtctgaaactcgtagttgagacgttgatctcttctctccggcctatcggcaacatcgtcctgatctgttgtgc tttctttatcatctttggcattttaggagtgcagctctttaagggcaagttctaccactgtgagggagctgatatccgaa acatctccactaaatccgactgcagaaaagcccactacaaatgggtccggcggaagtataacttcgacaatttgggacag gccctgatgtccttgttcgtcctctcttccaaagatggctgggtgaacatcatgtatgatggattggacgccgtggggat tgaccagcagcccagccggaaccataacctctggatgcttctctacttcatttccttcctcctcatcgtcagcttctttg tgctcaacatgttcgtcggggtggtggtggagaacttccacaagtgtcggcagcaccaggaagccgaggaggcccggcga cgcgaggagaaacggctgcggcgtctggagaaaaagcgcaggaaagctcaacgacggccgtactatgccgattattcacc tgctcgaaaatacatccactcgctctgcaccagccattacctggaccttttcatcacgtttatcattggcgtcaacgtca tcacgatgtccatggaacacttcgaccaacccaagtctctagaagaagccctgaaatattgcaactacttgttcaccttc gtctttgtggttgaagccatcttgaaactggtggcctttggcttccggaggttcttcaaggacaggtggaaccagctgga tctggccatcgtcctgctgtccatcatggggattactctggaggagattgaaatgaatgccgcgctccccatcaacccca ccattatccgcatcatgagggtgctcaggattgctagagtgctgaagctgctgaaaatggccacagggatgcgggccttg ctggacacggtggttcaagcccttccccaggtggggaacctcggcctgctatttatgcttctttttttcatctacgctgc tctgggggtagaattatttgggaagttagactgcagcgaggaaaatccttgtgaaggcctaagtcggcacgctaccttca acaactttggaatggccttcctcaccctctttagggtatcaacaggggacaactggaatgggatcatgaaggacactctc cgggaatgccacaaggatgataagcactgcctcagctacctgcctctcatctcccctgtttacttcgtcaccttcgtcct catcgcccagttcgtcctggtcaacgtggtggtggccgtcctgatgaagcacttagaggaaagcaacaaggaggcgaagg aagatgccgagatggatgccgaaattgagctggagatgtccagaggggtcggcacaccagaaaggaccatggatgggaga cagaccccttccaaggggggttcacccctcctgttgaagcataaagccatgggagcttctgctgctgccatcggcattcg ggagccccagaatcttctgactcttcgcaagatctcggtggcaaggatgcattcgctgcccaacgacagctacatgttcc gtcctgtgatgcccgccaagcttcctttcccgctccatgaaggggagctagaagccttctcctacaagtcacctcgaggg tccgtcacgtccatccgttctcagccagtggtcacttcttcatctctgaggatcccacagttggccttccgccccacaac gccccctcctagccacaacatgggagctccatggaagcttctaccccctcaccctgcccctcgcacccccagtttcaaca gactgctgtgtagacaggaggccgtccggaaggactcattggatagctcagctgtggagtcaaagcagtgtgtccaggct gagatgcgtgaaaacccacccctgaaaaagttgtcccacagtattttggggggccctcagcctcccccagcccccacata cctcccaggcagtcctccccttccccacccctccccttctcgcccttcaagcatccacacccacaaggacaccttcagcc agcacaacatctcaaacaggaggtccacccacggtagcctcctggacacctccctctttgagtcctccgatctggcggat gaagaggtccgccacatcaacagctctgcacgggattggagggcacagctggagagcggggactgctccgactcctcttt cgcctctccggcgccatcccctgtccccttcaggaactgcagcacaagcagcttgacgatggggaagggcaaggagaagg acctgaagaagttctacagcgtagacacccgggggttcttggccaagccgctgtgggcggatgaccagcgacggcactcc attgagatctgcccctcggtcgaccatggggctcgtggcttcgcagacacctctgaaaggaggaggctgcctctccaggt ccagtcggagtccgagtacctgcatggcatccggaggaagaagaaaatgagccccccctgcatttctatcgaccctcccg tggaggaagaaagcagcgccaccacaacgcgcaccaaggcctctgagaacagcctgctgaggcggagaacaccctcctgt gaatccacggcctacagggactccttggagctggccgagggtcagcctggagaaccggcctgcaaggcagaccgccgggc acccccagcctgccgaggggagcacttaaccatcccgagcttctcttacgaaccgacggaccccggttccacgggtgagc cctgcaaacgcctctcagagagcagccaagctgtggaccgctctgtggattcccccccagagggtccggagctgcagcca acagaccctttggagactcacggcaacccctctgagccaaaccaagaagaactcgggggggcgaggaagtgtcccctccc gcagcacggacaggttccagggaccccaaccaccacagaagaggttgtggacgagccggtatagcttccaaggggggtgg tctttggtgaactttaagggctttgccaccacatgtggcttcgaagaggagaacaggttggaaagccgccctctccatgg ctgatgcttactcccccaccccaaacccttggtttctcctcgctgcgaaggtgaaatgttgcaataatccgaactttaaa agtgcacaacgaaaagtaaagaaggagatttccaaagtcagcaggaaaagaggaaaaaaaaaccaaataaatagtaaatt atttaaaagtttc |
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Protein
| Protein ID | habu1_s2789_g09966.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g09966.t1 MLVCGRLCQVLLAKGAKEGCASLCSARAFDPGSIFEGELKEPAAIMTDGERRASFQPLSRDEVRVPIASGQAPSQVPQSG EEKDEDTFSACKSIQDSLASADSSTRDPAHEGDNQIPYPALASTVFFCFSQTTRPRSWCLKLAFDHFIFAFFAVEMVIKM VALGIFGHKCYLGDTWNRLDFFIVIAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLL LCFFVFFIFGIVGVQLWAGLLRNRCFLDSHIQRTHNLTFLHKYYRPEEGEENPFICSSLRDNGMQKCSSIPNRREYKMDC TLTMDAYNPHLDSLDLGSRNACINWNQYYNACRTGDLNPHNGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYN FIYFILLIIVSPTHPVMKSGPRLTLAKLCMVGSFFMINLCLVVIATQFSETKQRENQLMQEQRARYLSNDSTIASFSEPG SCYEEFLKYICHIFRKVKRRTLRLYNNWQSKRRKKVNPNSGGDNGQGQQSGKRRITSIHHLIHHHHHHHHHHYHIGNGSP QGPRSNPGICDLELDVIKPGGQLMLPPPSPSHPGGRAADTESIHSIYHADCHVEGTSVKCKSSSIAAGSKAANRGSMNYP TILPSPANKASVPPLTKGKKNEGSEVTSPMPMVSSPAHLNADCYGKLHHLVGERGLCRTSSILSGLNVPCPLPGPQANTL SCELQNCPFCASILEDPEFEFSEADSYESGEDNNGIYEFTQDVKHGDFRDQIQQQRNKKKKKRKPAKERNKLTKVWKAFG NKLKRIVESKYFNRGIMIAILINTLSMGIEYHEQPDELTNALEISNIVFTSMFALEMLLKLLAFGIWGYIKNPYNIFDGI IVVISVWEIIGQADGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFGL RTETGDTMPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGD ANRSDTDEDKTSTNFEEEFEKLKELRASEMKLYSLAVTPNGHLEGKGSMPPPIIMHTAATPMPTPKGSPHMDSAYPFGDS RRGSNVSVDPLNFDQKSLSSLRSSPCANWGSRRSSWNSLGRAPSLKKKSQCGERESLLSGEGKGSTDDEAEETKLSTLSR RPLHHRAESLDCRGGLDLPELLQVPGVHPPVAMLPLEYQDCNGKMLQVPSEFYLHLDSRKEDPFDYDENMEDNFCYRIRK TLEPYKPKWCKNHEDWSLYLFSPQNRLRANCQKVIAHKMFDHVVLVFIFLNCITIALERPDIDPNSTERIFLSVSNYIFT AIFVAEMMVKVVALGFFSGEHTYLQSSWNVLDGILVFVSIIDIIVSMASAGGAKILGILRVLRLLRTLRPLRVISRAPGL KLVVETLISSLRPIGNIVLICCAFFIIFGILGVQLFKGKFYHCEGADIRNISTKSDCRKAHYKWVRRKYNFDNLGQALMS LFVLSSKDGWVNIMYDGLDAVGIDQQPSRNHNLWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEAEEARRREEK RLRRLEKKRRKAQRRPYYADYSPARKYIHSLCTSHYLDLFITFIIGVNVITMSMEHFDQPKSLEEALKYCNYLFTFVFVV EAILKLVAFGFRRFFKDRWNQLDLAIVLLSIMGITLEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTV VQALPQVGNLGLLFMLLFFIYAALGVELFGKLDCSEENPCEGLSRHATFNNFGMAFLTLFRVSTGDNWNGIMKDTLRECH KDDKHCLSYLPLISPVYFVTFVLIAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIELEMSRGVGTPERTMDGRQTPS KGGSPLLLKHKAMGASAAAIGIREPQNLLTLRKISVARMHSLPNDSYMFRPVMPAKLPFPLHEGELEAFSYKSPRGSVTS IRSQPVVTSSSLRIPQLAFRPTTPPPSHNMGAPWKLLPPHPAPRTPSFNRLLCRQEAVRKDSLDSSAVESKQCVQAEMRE NPPLKKLSHSILGGPQPPPAPTYLPGSPPLPHPSPSRPSSIHTHKDTFSQHNISNRRSTHGSLLDTSLFESSDLADEEVR HINSSARDWRAQLESGDCSDSSFASPAPSPVPFRNCSTSSLTMGKGKEKDLKKFYSVDTRGFLAKPLWADDQRRHSIEIC PSVDHGARGFADTSERRRLPLQVQSESEYLHGIRRKKKMSPPCISIDPPVEEESSATTTRTKASENSLLRRRTPSCESTA YRDSLELAEGQPGEPACKADRRAPPACRGEHLTIPSFSYEPTDPGSTGEPCKRLSESSQAVDRSVDSPPEGPELQPTDPL ETHGNPSEPNQEELGGARKCPLPQHGQVPGTPTTTEEVVDEPV |
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