Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s2789_g09967
Locus habu1_scaffold2789 : 340329 ... 342665 : -
To GenomeBrowser habu1_scaffold2789:340329..342665
Genes list of scaffold habu1_scaffold2789

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s2789_g09967.t1 gi|327286958|ref|XP_003228196.1| PREDICTED: coiled-coil domain-containing protein 70 [Anolis carolinensis] 0.0
habu1_s2789_g09967.t1 gi|564267664|ref|XP_006272636.1| PREDICTED: coiled-coil domain-containing protein 70-like [Alligator mississippiensis] 0.0
habu1_s2789_g09967.t1 gi|530607279|ref|XP_005295324.1| PREDICTED: putative golgin subfamily A member 6C [Chrysemys picta bellii] 0.0
habu1_s2789_g09967.t1 gi|557259870|ref|XP_006015593.1| PREDICTED: coiled-coil domain-containing protein 70-like, partial [Alligator sinensis] 0.0
habu1_s2789_g09967.t1 gi|694667215|ref|XP_009487948.1| PREDICTED: coiled-coil domain-containing protein 70-like [Pelecanus crispus] 1.4013e-45

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.1
Venom grand-1 0.0
Pit, infrared sensing 0.2
Nose 0.0
Brain-1 0.0
Eye 0.0
fetal fibroblast 0.0
venom gland-2 0.0
Brain-2 0.1
Spleen 0.3
Lung 0.0
Liver 0.1
Kidney 0.1
Pancreas 0.0
Small intestine 0.1
Large intestine 0.0
Stomach 0.0
heart 0.3
ovary 0.1
cheek muscle 0.2

Transcript
Transcript IDhabu1_s2789_g09967.t1
Definition-
>habu1_s2789_g09967.t1
agagctctgcagatgttctaggtctgtttgctaaatattccctggctgccatagcagcagagctgttaacaaagggaaca
tcaacagaactgaaggaagtgttacagctttgggcaaatggctaacaggaagaagaagctggaattgtctccaagtcatt
cagattcttgtgacagcagccccaccgccccttccccagtgtctggccaacaggagagctggcaccatgtaacccccttc
ccagccttgcagaaggaggtagtccaacgtaacctgaaggaggagaaaaaaggcttgcaagaagacgtcaagggactctg
ggagaggtgcagggagctgagaggggagatcagggacttccaagaagacaacaaaatcaaagctttgtggggagagatca
atgttttcaagcacaagaacaagagtttcttggatcagatcaaagacttcttagaagagaactgggttttcatggaagag
gtcaagctgtttcatacccaaaaattagatgcccgggagaaggtgagaatctttcaacggaagatagaaactttccagga
gaagatcaaagggacagaggaggagatttcctccttggaagaaagaaacgaatccttccgcaatgtcatcaaggctcttc
agctgaagaacaaggaggtccaggaagcaaacaagagcatgcgtgagaagaacaaagccctgcaggaaaagatggaaacc
gtggaagagaagaacaaggccttttggaaggaatgcaaagccttttggaagaaagacaagaccttttgggaagaagatat
ggccatctccagggacaaaatgagcctttggaatgaatacatagctctccgggacaacgaccaggctctccaagaagaaa
aaggcagaatgtgggacatggtggaagctctctgggatgccaagtattccatatggaaacaactcaatggttttccagaa
gaagtgcctcatgagctaggaattgaggtggtggggaatggggccgacggtgaccatgacagtgtccctgaagaagaaaa
gcaagggtgaaaggattccattggtcaggatgacacaagtgaggacatctcctagacactgaattctggcctgcacaaaa
gggctcctttgacattaacagctgaataaaaccttgatggaactccatgtgg

Protein
Protein IDhabu1_s2789_g09967.t1
Definition-
>habu1_s2789_g09967.t1
MANRKKKLELSPSHSDSCDSSPTAPSPVSGQQESWHHVTPFPALQKEVVQRNLKEEKKGLQEDVKGLWERCRELRGEIRD
FQEDNKIKALWGEINVFKHKNKSFLDQIKDFLEENWVFMEEVKLFHTQKLDAREKVRIFQRKIETFQEKIKGTEEEISSL
EERNESFRNVIKALQLKNKEVQEANKSMREKNKALQEKMETVEEKNKAFWKECKAFWKKDKTFWEEDMAISRDKMSLWNE
YIALRDNDQALQEEKGRMWDMVEALWDAKYSIWKQLNGFPEEVPHELGIEVVGNGADGDHDSVPEEEKQG

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