Gene
| Gene Model ID | habu1_s2789_g09968 |
|---|---|
| Locus | habu1_scaffold2789 : 350140 ... 458235 : - |
| To GenomeBrowser | habu1_scaffold2789:350140..458235 |
| Genes list of scaffold | habu1_scaffold2789 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2789_g09968.t1 | 1 | 1 | ANF_receptor | 63 | 198 | 7.5e-08 | 31.5 | 4.3e-11 | 1.3e-07 | 30.7 |
| habu1_s2789_g09968.t1 | 1 | 1 | Lig_chan-Glu_bd | 383 | 434 | 3.1e-19 | 68.7 | 2.4e-22 | 7.1e-19 | 67.5 |
| habu1_s2789_g09968.t1 | 1 | 1 | SBP_bac_3 | 390 | 718 | 4.0e-23 | 81.8 | 3.7e-26 | 1.1e-22 | 80.4 |
| habu1_s2789_g09968.t1 | 1 | 1 | Lig_chan | 483 | 749 | 5.1e-26 | 91.1 | 4.6e-29 | 1.4e-25 | 89.7 |
| habu1_s2789_g09968.t1 | 1 | 1 | NMDAR2_C | 760 | 1378 | 0.0 | 584.9 | 0.0 | 0.0 | 584.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2789_g09968.t1 | gi|557259791|ref|XP_006015558.1| | PREDICTED: glutamate receptor ionotropic, NMDA 2A [Alligator sinensis] | 0.0 |
| habu1_s2789_g09968.t1 | gi|564247483|ref|XP_006262842.1| | PREDICTED: glutamate receptor ionotropic, NMDA 2A-like [Alligator mississippiensis] | 0.0 |
| habu1_s2789_g09968.t1 | gi|637359587|ref|XP_003228217.2| | PREDICTED: glutamate receptor ionotropic, NMDA 2A [Anolis carolinensis] | 0.0 |
| habu1_s2789_g09968.t1 | gi|530607220|ref|XP_005295297.1| | PREDICTED: glutamate receptor ionotropic, NMDA 2A isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s2789_g09968.t1 | gi|591357694|ref|XP_007053868.1| | PREDICTED: glutamate receptor ionotropic, NMDA 2A [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.3 |
| Venom grand-1 | 0.1 |
| Pit, infrared sensing | 0.2 |
| Nose | 0.1 |
| Brain-1 | 1.1 |
| Eye | 1.3 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.0 |
| Brain-2 | 3.6 |
| Spleen | 0.4 |
| Lung | 0.0 |
| Liver | 0.1 |
| Kidney | 0.3 |
| Pancreas | 0.1 |
| Small intestine | 0.1 |
| Large intestine | 0.1 |
| Stomach | 0.0 |
| heart | 0.1 |
| ovary | 0.7 |
| cheek muscle | 1.5 |
Transcript
| Transcript ID | habu1_s2789_g09968.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g09968.t1 cgccgccgcagccccgcaggagcccggcgcgatgcgggtcgctcgggcgatcgcggagatttggggagggtcccgcgaac tgctcccgtccggctgcggtaggtttcaagtgggggtgtcttcagcaggacgaaatccctgctctgcttcagcttctgag gccataacggctaaagatggagagtttgcttcagaagcacaaagtctgaacaccgattcttctagctttacagaccctga caaggatgagatgtctacctttttccagtttggggcttccatccaacaggaggccatcatcatgctgaagttcatgcaat actacgactggcacatattctccttggtgaccagcactttccccggctaccgggacttcattggcttcgtcaagtacacc gtggaaaacagttttgtgggctgggacatgcaaaacgtggtcaccctcgatgcggctgttggagatgccaagtccacaat tcagctgaagaagatccattcttcggtcatcctgctctattgctctacagatgaggccacatacatcctggatgaagccc gttccctgggcctgacgggctatgactttttctggattgtccccagcttggtcagtgggaacatggaaaccccacctgac acttttccttcggggctgatttcagtggcctatgatggatgggactacagtttggatgctcggatccgggacggccttgg gattattacaacggccgctgcagccatgctggaaaaatattccttcatccctgaggcgaagaccagttgctacgggcagt cagagtacgacgaacgcccatctcacatgcttcacaaatttatgatgaacgtgacctggaaaggccgagacttatccttc actacggacggctaccaagcacagccgcggctcgtggtcatcgtcctcaaccagacccgggcctgggagaaggtgggcga atgggagaaccagacgctgacgcacaaatactccgtgtggccccggttcaactctttcaacgacagcgtcccagaccaca accacctcagcatcgtcaccttggaggaggctcccttcgtcatcgtggaagacatggaccctttgacggagacctgtgtg aagaacacggtgccttgccggaaatacgtcgtcatcaacaacatcaccaaagaaggaaagaacctgaagaaatgttgcaa agggttttgcattgacatcctgaagaagctctcgaggaccatccagttcacctacgacctctatcttgtgatcaatggga agcacgggaaaaagatcaacaacgagtggaatgggatgatcggggaggtggtcaagaagcaagccgtgatggcggttggg tccctcaccatcaatggcgagcgctcagaggtggtcgatttttcggtgccctttgtggaaactgggatcagcgtcatggt ctcccggagcaacggcaccgtttctccctctgcttttttagatgctcacgggccctccttcaccatcgggaaggccgtgt ggctcctgtggggcctggtgttcaacaactctgtgccggtgcagaacccgaaaggcaccaccagcaaaatcatggtctcg gtctgggccttctttgcggtcatcttcttggccagctacacagccaacctggctgccttcatgatccaggaggaatttgt ggaccaagtcacggggctgagcgataagaagtgtatttttctggcctacgtgcctctggtatgtgctgttttgtgtcttg tggctgctgcaaactgctttgcaaaattctggatagttcagttccagcagccctacgcctactcccctcctttccggttt gggactgtccccaacgggagtactgagaggaacatccgcaacaactacaaggagatgcacgcttacatggtgaagtacaa ccagaagggagtggaggacgccttggtcagcttgaaaaccgggaagctggacgctttcatctacgacgcagcagtgctga actacaaggctgggcgggacgaaggctgcaagctggtgaccatcggcagtggctacatctttgccaccacgggctatggc atcgccctgcagaaggggtcgccctggaagagggccatcgacctggcgctgctgcagtttgtgggagacggggaaatgga ggaactggagaccctctggctgaccggcatttgccacaacgagaagaacgaggtcatgagtagccagctggacatcgaca acatggcgggcgtgttttacatgctggccgctgccatggcgctcagcctgatcacctttgtgtgggagcacctcttttac tggaagctccggttctgcttcaccgggatgtgctccgatcggccagggctgctgttctccatcagcaggggtatctacag ttgcatccatggggtccacattgaggagaagaaaaagtctccccacttcaccctgaccagttctcagagcaacatgttga agcttctgcagacggccaagaatatgaccaacgtgaaccccgggcggatcaattccccacaaagagcagctgagttcatc cgccgtggatcgttgatgatggacctgatgatggaaaagggcagcttcatcttctcggacaacaaccgccctctgacccc caaggagaacgtcttcagtgacaatacgaacgagctgcagaccttctctgcaaaccgccacccagataatctcaacaact acgtcttccaagggccgcaccccctcacactgcacgagtccaacccgaacacggtggaggtgaccatggcggcagaggcc aaggagaactcccgcccgaggcagctgtggaggaagtcgctggaatcgctgcgccaagactccctccggcagagtcacgg ttctcagagggatgatggcacagggggaagccggcggcactccctgaagggccccaggtacctccctgaagacgtccact cggatgtctccgactcctcaagcagagccaccggccacacggagggggagagcaacagcaaaccccttaagaccaaggac aacgtgaagaagaggccggcatcgaaatatcccaaggattgcagcgaggtggagctgacctatctgaagagcaaacagtc tttaccccgggacaaaatttacatcatcgaggcagacaaacagcacagtttccacctagatgtcccccccgagtatgtag agaacattatccttcctgagtcggctgagttttccaacctctaccaggatcgcaacggcaactaccgagggcctgagcag agcaaccaagttcccctgcccaacgaggaaagtcttccaagtaacgaccagtacaagctctacccaaagcactacggcac aaaagacaaaaacgtggcctacgacgaagcaaatgagcgataccggcagaaggccacccactgccggagctgcctgacca gcctgcccagttacgcagggcactacttgagccggtcaccctaccggtgcggcgcctgcgtacggatgggcagcctctac gacatcgaggagggccagatgctgcagagccctgccaactccaggccccgggaagaaccgtgccagcaggactgggccca ggaggacaaaacccagctgccccggaagagcaagctgcaaatcagccggcagcgttcgttcgacaacctcttcagtaagc atcgggacggcaatgggggcaggacggcccgtagcatcagcctgaaggagaaagagaggctcctggaagggggcccctac gccaccctcttcagggcgccccaaagcaaacactcgagcggcaagctcccgcttttcacacgcacgttggacgacgggaa gaggatcaagtccctgtatctggagtgctcggaagagaacccttttcttcgctcttattgcgacgaccagcacttggtcc cggcaccgagtccggccggcctgcacagacagccggcttatgacagcgtctcccggtcatcggttaaatcgacagcctca tactgttccagagatggccgggtccacaacgacgcgtgcgtttcggagcacgggatgccttacgttgcccctcagaatag cacgtactctgctccacgagggctaaactcctgcagcaatagacgcgtgtattataagaagatccctagcctggaatcag acgtaaagtagctgagcttcaccaggcagtcagcttaaaaagccacatcatcctgaactaatcacaaaacgtgactcaat ctttccaagccagacagagagattcagccatctcaggtaataaatatattatccagctggggactt |
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Protein
| Protein ID | habu1_s2789_g09968.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g09968.t1 MRVARAIAEIWGGSRELLPSGCGRFQVGVSSAGRNPCSASASEAITAKDGEFASEAQSLNTDSSSFTDPDKDEMSTFFQF GASIQQEAIIMLKFMQYYDWHIFSLVTSTFPGYRDFIGFVKYTVENSFVGWDMQNVVTLDAAVGDAKSTIQLKKIHSSVI LLYCSTDEATYILDEARSLGLTGYDFFWIVPSLVSGNMETPPDTFPSGLISVAYDGWDYSLDARIRDGLGIITTAAAAML EKYSFIPEAKTSCYGQSEYDERPSHMLHKFMMNVTWKGRDLSFTTDGYQAQPRLVVIVLNQTRAWEKVGEWENQTLTHKY SVWPRFNSFNDSVPDHNHLSIVTLEEAPFVIVEDMDPLTETCVKNTVPCRKYVVINNITKEGKNLKKCCKGFCIDILKKL SRTIQFTYDLYLVINGKHGKKINNEWNGMIGEVVKKQAVMAVGSLTINGERSEVVDFSVPFVETGISVMVSRSNGTVSPS AFLDAHGPSFTIGKAVWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDKK CIFLAYVPLVCAVLCLVAAANCFAKFWIVQFQQPYAYSPPFRFGTVPNGSTERNIRNNYKEMHAYMVKYNQKGVEDALVS LKTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPWKRAIDLALLQFVGDGEMEELETLWLTGI CHNEKNEVMSSQLDIDNMAGVFYMLAAAMALSLITFVWEHLFYWKLRFCFTGMCSDRPGLLFSISRGIYSCIHGVHIEEK KKSPHFTLTSSQSNMLKLLQTAKNMTNVNPGRINSPQRAAEFIRRGSLMMDLMMEKGSFIFSDNNRPLTPKENVFSDNTN ELQTFSANRHPDNLNNYVFQGPHPLTLHESNPNTVEVTMAAEAKENSRPRQLWRKSLESLRQDSLRQSHGSQRDDGTGGS RRHSLKGPRYLPEDVHSDVSDSSSRATGHTEGESNSKPLKTKDNVKKRPASKYPKDCSEVELTYLKSKQSLPRDKIYIIE ADKQHSFHLDVPPEYVENIILPESAEFSNLYQDRNGNYRGPEQSNQVPLPNEESLPSNDQYKLYPKHYGTKDKNVAYDEA NERYRQKATHCRSCLTSLPSYAGHYLSRSPYRCGACVRMGSLYDIEEGQMLQSPANSRPREEPCQQDWAQEDKTQLPRKS KLQISRQRSFDNLFSKHRDGNGGRTARSISLKEKERLLEGGPYATLFRAPQSKHSSGKLPLFTRTLDDGKRIKSLYLECS EENPFLRSYCDDQHLVPAPSPAGLHRQPAYDSVSRSSVKSTASYCSRDGRVHNDACVSEHGMPYVAPQNSTYSAPRGLNS CSNRRVYYKKIPSLESDVK |
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