Gene
| Gene Model ID | habu1_s2789_g09972 |
|---|---|
| Locus | habu1_scaffold2789 : 503929 ... 508148 : + |
| To GenomeBrowser | habu1_scaffold2789:503929..508148 |
| Genes list of scaffold | habu1_scaffold2789 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cytosolic fe-s cluster assembly factor nubp1 | GO:0005524 GO:0005829 GO:0005886 GO:0006879 GO:0010826 GO:0016049 GO:0016226 GO:0046872 GO:0051539 GO:0051642 GO:0070062 GO:0072697 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2789_g09972.t1 | 1 | 1 | CbiA | 66 | 238 | 1.5e-15 | 57.1 | 2.5e-18 | 2.1e-15 | 56.6 |
| habu1_s2789_g09972.t1 | 1 | 1 | AAA_31 | 66 | 116 | 7.9e-06 | 25.8 | 9.9e-08 | 8.6e-05 | 22.5 |
| habu1_s2789_g09972.t1 | 1 | 1 | ParA | 173 | 254 | 1.0e-36 | 124.6 | 2.6e-39 | 2.3e-36 | 123.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2789_g09972.t1 | gi|602657610|ref|XP_007434521.1| | PREDICTED: cytosolic Fe-S cluster assembly factor NUBP1 [Python bivittatus] | 0.0 |
| habu1_s2789_g09972.t1 | gi|327287006|ref|XP_003228220.1| | PREDICTED: cytosolic Fe-S cluster assembly factor NUBP1 [Anolis carolinensis] | 0.0 |
| habu1_s2789_g09972.t1 | gi|593710237|ref|XP_007101698.1| | PREDICTED: cytosolic Fe-S cluster assembly factor NUBP1 [Physeter catodon] | 0.0 |
| habu1_s2789_g09972.t1 | gi|744564412|ref|XP_010978351.1| | PREDICTED: cytosolic Fe-S cluster assembly factor NUBP1 isoform X2 [Camelus dromedarius] | 0.0 |
| habu1_s2789_g09972.t1 | gi|602702429|ref|XP_007462894.1| | PREDICTED: cytosolic Fe-S cluster assembly factor NUBP1 [Lipotes vexillifer] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 20.4 |
| Venom grand-1 | 62.9 |
| Pit, infrared sensing | 27.6 |
| Nose | 21.3 |
| Brain-1 | 9.3 |
| Eye | 24.1 |
| fetal fibroblast | 46.4 |
| venom gland-2 | 49.9 |
| Brain-2 | 8.9 |
| Spleen | 27.8 |
| Lung | 30.6 |
| Liver | 66.7 |
| Kidney | 42.1 |
| Pancreas | 83.9 |
| Small intestine | 47.2 |
| Large intestine | 26.6 |
| Stomach | 44.4 |
| heart | 33.5 |
| ovary | 58.6 |
| cheek muscle | 70.2 |
Transcript
| Transcript ID | habu1_s2789_g09972.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g09972.t1 gaagtgccgcacttcttccggcagtggcgccgcgatggccgaggggagtgggctttccctcgacgcccggcctcacgact gtccgggcaccggcagcaatgaagcaggcaaggctgatgcttgccaaggatgccccaaccagggcttgtgttccttgggg cagcttgctggccccgacccagccattgaggaaattaaggaaaaaatgaaaactgtcaagcacaagctgctggtgctctc tgggaaaggaggtgtgggtaagagcacattcactgctctcttggcccatggattcgcagaggatgacactacacaggttg ctgtgctggacattgacatttgtggaccatccattccaaaaatcatgggccttgagggagaacaggttcatcaaagcgga tcaggctggtctccagtgtatgttgaagaaaacctgggtgtgatgtcagtggggtttctgctgagcagccctgatgatgc cgttatttggagaggaccgaaaaaaaacgggatgattaagcagtttcttcgggatgtagattggggtgaaattgactacc tgattgtagatacccctccaggaacatcagatgaacatatatccatagtccagtatctcagcactgccggagtcgatggg gctgtgctcatcaccaccccacaggaagtggcacttcaggatgttcggaaagaggtcagcttctgccataaggtgaagct gcctatcattggagtggtggaaaatatgagcagcttcacatgcccaaaatgcaagaaagaatcccaaatattccctccca gcacggggggtgcagagatgatgtgccgcaccttaaacgtgcctctcctgggaaaaatgcctctcgaccctcaaatagga aaaagttgtgacagaggccactctttcttagccgaagcgccccattctgcagccacactgtctttcaggagcattatcca aagaatccaggactactgtaaccagaactccccacaggaagaagacaggatttgagtagcagataaatgtggatcttttg tgcatatatctatataggtgcacaaacatgtacatgcaaataaatacctttgaataatacttgccaatcagagatgcttt tctgaggaaagcctttctaaattttccaaaacaggctgtgttttgttcctagaagcagatctgcttatcgtgatttgata aattcccttaataattatcttcac |
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Protein
| Protein ID | habu1_s2789_g09972.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g09972.t1 MAEGSGLSLDARPHDCPGTGSNEAGKADACQGCPNQGLCSLGQLAGPDPAIEEIKEKMKTVKHKLLVLSGKGGVGKSTFT ALLAHGFAEDDTTQVAVLDIDICGPSIPKIMGLEGEQVHQSGSGWSPVYVEENLGVMSVGFLLSSPDDAVIWRGPKKNGM IKQFLRDVDWGEIDYLIVDTPPGTSDEHISIVQYLSTAGVDGAVLITTPQEVALQDVRKEVSFCHKVKLPIIGVVENMSS FTCPKCKKESQIFPPSTGGAEMMCRTLNVPLLGKMPLDPQIGKSCDRGHSFLAEAPHSAATLSFRSIIQRIQDYCNQNSP QEEDRI |
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