Gene
| Gene Model ID | habu1_s2789_g09973 |
|---|---|
| Locus | habu1_scaffold2789 : 508166 ... 513448 : - |
| To GenomeBrowser | habu1_scaffold2789:508166..513448 |
| Genes list of scaffold | habu1_scaffold2789 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| golgi apparatus membrane protein tvp23 homolog a | GO:0016021 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2789_g09973.t2 | 1 | 1 | DUF846 | 142 | 283 | 0.0 | 174.9 | 0.0 | 0.0 | 174.6 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 9.6 |
| Venom grand-1 | 12.5 |
| Pit, infrared sensing | 8.2 |
| Nose | 43.4 |
| Brain-1 | 11.8 |
| Eye | 5.0 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 2.1 |
| Brain-2 | 11.6 |
| Spleen | 77.0 |
| Lung | 12.0 |
| Liver | 23.3 |
| Kidney | 1.5 |
| Pancreas | 71.1 |
| Small intestine | 9.3 |
| Large intestine | 27.1 |
| Stomach | 66.9 |
| heart | 1.1 |
| ovary | 1.0 |
| cheek muscle | 2.6 |
Transcript
| Transcript ID | habu1_s2789_g09973.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g09973.t1 gctcacatccgcagaggccagaggaggaagaggaggagacggagccaagaagatgaagcagagcttagcagatgacacgg aagacgtgtccctcgactttgggaatgaagaggagctggccttaaggaaggcaaaagtcaggtacccgctggccaccttt ttccacctcttcttccgtgtgagtgccatcatgacctacctcatctgcgactggttcagcaaaagcttcatcgcctgctt cctcgtcatcctcctcctcctctcctttgacttctggtctgtgaagaatgtcaccggaaggctgctggttggtttgcgat ggtggaatcagatcgacgaggatgggaagagccactgggtgttcgaagcaaagaagggctcctctgctgtggcccccccc actgaagtcgaagcccggatcttctggcttgggctgatcatctgtcccatcatctggatccttttcttcttcagcacctt gttctctttgaagttgaaatggctggcactggtggtaactggcatctgtctccagacggctaacctttatggctatatcc actgtaaactagggggagccccccaaaccatccgcaaagtcaccccacgcttcccggcacaggagatcttccagaaggga ggatcagaagactttcaaagaaacgccctgaagcatctggggacccaaagtcattagaacaaggatgtctggagagtccc tgggggacggtttctgtgctaaacacgagacaggctgcatttcgcttcttcagaagggccaacgcaacataattggcggc agcttcctctttgcttcacacccatgacgctttccagtgttgcagcccattcccaggaagctgttctggcctttccttct gttggaggcggtggcaggctgatgctgagctccaggctctgatccccaagaggaatgttgcttctccgcttgcgaggcag gcctagaagcctcttcctcctcctcccactccttcggctgcgttccctcggagcctttagcggctccctggcaatttggc cggaggcctccagcaggcttggcccagcccagaatctgttatgcgtcatttcggtatttgtgggtggctttccagcaggg actgggtgtgcccatcacacatttctttctgcccccgttcacctatggaggacgctgggggcaccaaccagtcctcctcc ttgccaatctctccctggggagcagcaaggggtacgagaggaggcctctgcccactgtctttgccttctccctgctttct gcaagaacacttgatccacaaagatgaggaaatgaaacagcgatttcctctgcttagaactagacagacaccaacagaga caatgagttatatttacttatattcttaaaaagagctaatatggcactacaccatatcgcttgtgaacaggaccctgtca gcaccacccttctaaaacacctgaagaataagactaaaccaaaatctaaggaactgattttaaataatcctcaaacagag aaagaaagactttttgtttttctcaataaaagcaacctctgaacttgtctct |
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| Transcript ID | habu1_s2789_g09973.t2 |
| Definition | - |
>habu1_s2789_g09973.t2 cggattttcaggctgagctttgcattctgggctgggtttcagttgggtaacgttgcattagctccttggctgccatgaag tccggctgctttgcaatagataaagaacctggcgggcagaaaggaaagttaagtggaaaacctcaagaacaggtcgagga tgggcctcggcactatcccgaaattgggggacctgaaagaccagcccagactggggactttggccgtcaccctggagctg cccggtgcccagagccaggcggcctctgggccaacctgcccctcgctgcctgggcagcagcatccctgctccagtcgcca tagcgacggccaggaggaggcaggatgttgggtggatccggctcacatccgcagaggccagaggaggaagaggaggagac ggagccaagaagatgaagcagacccggaagagaggcacctccacgcaggtaggcagccagctggcactggcgaggcctgg cacgaaaagaggaagcaacagcagagcttagcagatgacacggaagacgtgtccctcgactttgggaatgaagaggagct ggccttaaggaaggcaaaagtcaggtacccgctggccacctttttccacctcttcttccgtgtgagtgccatcatgacct acctcatctgcgactggttcagcaaaagcttcatcgcctgcttcctcgtcatcctcctcctcctctcctttgacttctgg tctgtgaagaatgtcaccggaaggctgctggttggtttgcgatggtggaatcagatcgacgaggatgggaagagccactg ggtgttcgaagcaaagaagggctcctctgctgtggccccccccactgaagtcgaagcccggatcttctggcttgggctga tcatctgtcccatcatctggatccttttcttcttcagcaccttgttctctttgaagttgaaatggctggcactggtggta actggcatctgtctccagacggctaacctttatggctatatccactgtaaactagggggagccccccaaaccatccgcaa agtcaccccacgcttcccggcacaggagatcttccagaagggaggatcagaagactttcaaagaaacgccctgaagcatc tggggacccaaagtcattagaacaaggatgtctggagagtccctgggggacggtttctgtgctaaacacgagacaggctg catttcgcttcttcagaagggccaacgcaacataattggcggcagcttcctctttgcttcacacccatgacgctttccag tgttgcagcccattcccaggaagctgttctggcctttccttctgttggaggcggtggcaggctgatgctgagctccaggc tctgatccccaagaggaatgttgcttctccgcttgcgaggcaggcctagaagcctcttcctcctcctcccactccttcgg ctgcgttccctcggagcctttagcggctccctggcaatttggccggaggcctccagcaggcttggcccagcccagaatct gttatgcgtcatttcggtatttgtgggtggctttccagcagggactgggtgtgcccatcacacatttctttctgcccccg ttcacctatggaggacgctgggggcaccaaccagtcctcctccttgccaatctctccctggggagcagcaaggggtacga gaggaggcctctgcccactgtctttgccttctccctgctttctgcaagaacacttgatccacaaagatgaggaaatgaaa cagcgatttcctctgcttagaactagacagacaccaacagagacaatgagttatatttacttatattcttaaaaagagct aatatggcactacaccatatcgcttgtgaacaggaccctgtcagcaccacccttctaaaacacctgaagaataagactaa accaaaatctaaggaactgattttaaataatcctcaaacagagaaagaaagactttttgtttttctcaataaaagcaacc tctgaacttgtctct |
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Protein
| Protein ID | habu1_s2789_g09973.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g09973.t1 MKQSLADDTEDVSLDFGNEEELALRKAKVRYPLATFFHLFFRVSAIMTYLICDWFSKSFIACFLVILLLLSFDFWSVKNV TGRLLVGLRWWNQIDEDGKSHWVFEAKKGSSAVAPPTEVEARIFWLGLIICPIIWILFFFSTLFSLKLKWLALVVTGICL QTANLYGYIHCKLGGAPQTIRKVTPRFPAQEIFQKGGSEDFQRNALKHLGTQSH |
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| Protein ID | habu1_s2789_g09973.t2 |
| Definition | - |
>habu1_s2789_g09973.t2 MGLGTIPKLGDLKDQPRLGTLAVTLELPGAQSQAASGPTCPSLPGQQHPCSSRHSDGQEEAGCWVDPAHIRRGQRRKRRR RSQEDEADPEERHLHAGRQPAGTGEAWHEKRKQQQSLADDTEDVSLDFGNEEELALRKAKVRYPLATFFHLFFRVSAIMT YLICDWFSKSFIACFLVILLLLSFDFWSVKNVTGRLLVGLRWWNQIDEDGKSHWVFEAKKGSSAVAPPTEVEARIFWLGL IICPIIWILFFFSTLFSLKLKWLALVVTGICLQTANLYGYIHCKLGGAPQTIRKVTPRFPAQEIFQKGGSEDFQRNALKH LGTQSH |
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