Gene
| Gene Model ID | habu1_s2789_g09977 |
|---|---|
| Locus | habu1_scaffold2789 : 587397 ... 590438 : - |
| To GenomeBrowser | habu1_scaffold2789:587397..590438 |
| Genes list of scaffold | habu1_scaffold2789 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| suppressor of cytokine signaling 1 | GO:0005737 GO:0046426 GO:0060334 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2789_g09977.t1 | 1 | 1 | SH2 | 70 | 145 | 3.3e-07 | 30.0 | 8.7e-11 | 6.4e-07 | 29.0 |
| habu1_s2789_g09977.t1 | 1 | 1 | SOCS_box | 163 | 196 | 1.9e-08 | 34.0 | 4.0e-12 | 2.9e-08 | 33.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2789_g09977.t1 | gi|602657630|ref|XP_007434531.1| | PREDICTED: suppressor of cytokine signaling 1 [Python bivittatus] | 0.0 |
| habu1_s2789_g09977.t1 | gi|700347142|ref|XP_009917596.1| | PREDICTED: suppressor of cytokine signaling 1 [Haliaeetus albicilla] | 0.0 |
| habu1_s2789_g09977.t1 | gi|723548748|ref|XP_010297423.1| | PREDICTED: suppressor of cytokine signaling 1 [Balearica regulorum gibbericeps] | 0.0 |
| habu1_s2789_g09977.t1 | gi|527265059|ref|XP_005150751.1| | PREDICTED: suppressor of cytokine signaling 1 [Melopsittacus undulatus] | 0.0 |
| habu1_s2789_g09977.t1 | gi|698381539|ref|XP_009817506.1| | PREDICTED: suppressor of cytokine signaling 1 [Gavia stellata] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.9 |
| Venom grand-1 | 1.6 |
| Pit, infrared sensing | 5.8 |
| Nose | 4.1 |
| Brain-1 | 1.0 |
| Eye | 2.2 |
| fetal fibroblast | 18.1 |
| venom gland-2 | 1.2 |
| Brain-2 | 0.6 |
| Spleen | 10.4 |
| Lung | 4.5 |
| Liver | 6.0 |
| Kidney | 1.2 |
| Pancreas | 1.9 |
| Small intestine | 3.6 |
| Large intestine | 5.2 |
| Stomach | 2.9 |
| heart | 1.2 |
| ovary | 5.0 |
| cheek muscle | 0.8 |
Transcript
| Transcript ID | habu1_s2789_g09977.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g09977.t1 ttcgccggagagctgcggcggcggcggcgaagagaaggcggcggcggcggccgaggcccggtcttgagcggccccgccgc gtcccccctccggcctcgcagctccgggcggggaaggccggacagagacgccgaggcggccgaggagaacctcaacacag cagcccccccttggccccccaagcgatgggaggcagctccagtggatctcggttgtaggatggtagcacacagcagcgta acgcctgagaatgggattgcagtggagctgagaggccggcttcagccctccgtccgggccgctctgcaggtccggccccc ccacggcacggtgcaagccccgcgggacacccacttccacaccttccgctcacaggaggactttgggatcatcgtccgta ctagcgccttgctggaaaagtgcggcttctactggggtcccctgtcggtcagcgctgctcacgagaaactgaagggtgag ctggtggggaccttcctccttcgcgacagccggcaaaaaaattgcttcttcaccgttagcgttaagacggccaccgggcc caccagcgtccgtgtcctcttccagtccggtcacttcagcctggagggcagcaaagaggcctttgattgcctcttcaaac tgctggaacattacgtcaactcgccccggaaggtcctggtcgccccactacacaaagagcgcctgcggtcgctgcaggac ctctgccgcaaaaacattgtggcgacttttgggagggagaatttgccacacatcccactcaatccggtcctgaagacata cctggagtccttcccctttaaattgtgaggggagggagcattacgccagtggatgcgcctgagatgctggaagtggtgcc ttggtggtgtgcaatccagggagccaattgtgccctgggagtcgtgggggaaacggagtccccgcagtggcgaaccgcag gtggcgcagaggctgcctgtggcactgggcgttgcgtcgctgggtgaagacgtgaagcagacccgtggctggattgttgt acaagcctaagcaccgtcatgagcgcatctcaattctgtagcagttctattgaatttgaacacttgactaccaatgttta cacaaccaatggactgtttgcacaaactgaggccctcagaagccttgtcagtcattttctgctatgcagaaacacttttg ttactttatatctattttttctaaaagctaataataaaccttattataaaggttcttttt |
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Protein
| Protein ID | habu1_s2789_g09977.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g09977.t1 MVAHSSVTPENGIAVELRGRLQPSVRAALQVRPPHGTVQAPRDTHFHTFRSQEDFGIIVRTSALLEKCGFYWGPLSVSAA HEKLKGELVGTFLLRDSRQKNCFFTVSVKTATGPTSVRVLFQSGHFSLEGSKEAFDCLFKLLEHYVNSPRKVLVAPLHKE RLRSLQDLCRKNIVATFGRENLPHIPLNPVLKTYLESFPFKL |
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