Gene
| Gene Model ID | habu1_s2789_g09978 |
|---|---|
| Locus | habu1_scaffold2789 : 596209 ... 603436 : + |
| To GenomeBrowser | habu1_scaffold2789:596209..603436 |
| Genes list of scaffold | habu1_scaffold2789 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2789_g09978.t1 | 1 | 1 | NUDE_C | 135 | 286 | 1.6e-33 | 116.3 | 2.6e-36 | 1.6e-33 | 116.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2789_g09978.t1 | gi|602672810|ref|XP_007441906.1| | PREDICTED: nuclear distribution protein nudE homolog 1 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s2789_g09978.t1 | gi|557285729|ref|XP_006025646.1| | PREDICTED: nuclear distribution protein nudE homolog 1 isoform X1 [Alligator sinensis] | 0.0 |
| habu1_s2789_g09978.t1 | gi|591366703|ref|XP_007058206.1| | PREDICTED: nuclear distribution protein nudE homolog 1 [Chelonia mydas] | 0.0 |
| habu1_s2789_g09978.t1 | gi|530641797|ref|XP_005307624.1| | PREDICTED: nuclear distribution protein nudE homolog 1 [Chrysemys picta bellii] | 0.0 |
| habu1_s2789_g09978.t1 | gi|558146282|ref|XP_006119654.1| | PREDICTED: nuclear distribution protein nudE homolog 1 [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.9 |
| Venom grand-1 | 1.8 |
| Pit, infrared sensing | 4.4 |
| Nose | 2.0 |
| Brain-1 | 1.3 |
| Eye | 2.4 |
| fetal fibroblast | 26.0 |
| venom gland-2 | 1.3 |
| Brain-2 | 2.3 |
| Spleen | 3.4 |
| Lung | 5.4 |
| Liver | 2.7 |
| Kidney | 2.6 |
| Pancreas | 5.4 |
| Small intestine | 4.9 |
| Large intestine | 4.2 |
| Stomach | 3.0 |
| heart | 2.3 |
| ovary | 21.5 |
| cheek muscle | 2.9 |
Transcript
| Transcript ID | habu1_s2789_g09978.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g09978.t1 gaccggcagccaatgggaggccgcgcagaggctgcctgtgttgtttcggacgggacgagagttgccagttgagcnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncgcgagagagagccgggcctgccagatgtcctggctg ctggcaccaggcggggcgagagaagatcatgccaggcggcttctaccatggctgaccccgacaggagccccttcgattgc gcagggggggagatcggctactggaaggagctctccagcaaatacaagcagtgtgtggagagcgcccaggaggagctgcg cgagttccaagagggcagccgtgagtacgaagccgagctggagatgcagctgcagcagctggagactcgaaaccgggacc tgctctcggagaacgcccggctgcagatggaggtggagacggtcaaggagaagattgccagccaacatgccgacggggac cggcagatctcagccctggaggaggagctgggccaggcgaggggcgcccgggaccagctgcagaagtacatccgggaact ggagcagtgcaacgatgacctggagagggccaagagagccaccatcatgtccctggaggactttgagcagcggctgaacc aggccatcgagcgcaacgccttcctggagagcgagctggacgagaaggagagcctcctggagtcagtgcagcggctgaag gacgaagccagagatttgcgccaagagctggccgtgcagcagaagcaggagaagccgaaggcctcagtggagggctcctc ggaagctggacggatggacacaggcatgcgagccacctcccccaggccatcgacccctgcaatcccccaggggcccagca atggatttagtaccccaggagccttcagaagaggttttgagaatggatccagtggaacgccacttacgccagccgcgcgg atatcagcactgaacattgtgggggacctcctgcggaaagtcggggcactggaatccaagctggcctcctgccgaaactt cgtctatgaccagaccccgtaccgaagcccagcaccgccccctccctacttgggcagggacgtgtatgagaggcgtttga gcggcccccacgtgccccaagggcagcttataaaaagttcatcagaggagcattagtgttgaggctcctattccaacttg gaagtttctctctggggggggggagggtttccttttacgcaccgggaaagggatgtagggttgctggattattaaactag tttgtcatccaaaactgc |
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Protein
| Protein ID | habu1_s2789_g09978.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g09978.t1 MADPDRSPFDCAGGEIGYWKELSSKYKQCVESAQEELREFQEGSREYEAELEMQLQQLETRNRDLLSENARLQMEVETVK EKIASQHADGDRQISALEEELGQARGARDQLQKYIRELEQCNDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEK ESLLESVQRLKDEARDLRQELAVQQKQEKPKASVEGSSEAGRMDTGMRATSPRPSTPAIPQGPSNGFSTPGAFRRGFENG SSGTPLTPAARISALNIVGDLLRKVGALESKLASCRNFVYDQTPYRSPAPPPPYLGRDVYERRLSGPHVPQGQLIKSSSE EH |
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