Gene
| Gene Model ID | habu1_s2789_g09980 |
|---|---|
| Locus | habu1_scaffold2789 : 635518 ... 637698 : - |
| To GenomeBrowser | habu1_scaffold2789:635518..637698 |
| Genes list of scaffold | habu1_scaffold2789 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| lish domain-containing protein fopnl | GO:0005815 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2789_g09980.t2 | 1 | 1 | FOP_dimer | 49 | 113 | 1.2e-15 | 57.2 | 2.4e-19 | 1.8e-15 | 56.7 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 9.0 |
| Venom grand-1 | 30.1 |
| Pit, infrared sensing | 13.8 |
| Nose | 7.1 |
| Brain-1 | 3.5 |
| Eye | 8.4 |
| fetal fibroblast | 4.5 |
| venom gland-2 | 16.1 |
| Brain-2 | 3.8 |
| Spleen | 21.7 |
| Lung | 18.7 |
| Liver | 40.4 |
| Kidney | 22.2 |
| Pancreas | 80.3 |
| Small intestine | 17.6 |
| Large intestine | 15.0 |
| Stomach | 26.1 |
| heart | 10.1 |
| ovary | 7.7 |
| cheek muscle | 25.1 |
Transcript
| Transcript ID | habu1_s2789_g09980.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g09980.t1 gctgcgccccgcccctcccgctgcccgaggagcccccggccgcggtcgccatatgggcagcgtcgcgcgtgtgcacgaag agtccgggcagcgccgccagagggcgcccttcagcgagcctgcgcgctctgactcagcattccccccctctgccgccgcc gctgagtcagcccgcgctgcgattggccgggtgcgggccaatgggggcgaagggcgggcttcggtagctccgggcatcgc cgtcccggtctctcgcgggcttccggccccgcccctctcaagatggcgaccgtcgccgagctgaaagcggccctgaagga ggcgctggcgcggcgcggcgcgctggggcaggtgcgggcccacgttcgggccgaggtcttcgccgcgctggacgatccgg gcgagccgcgccccgcagccccccgcgagaccctcctgctgaacgagctcatccgcgagtacctgcagttccaccggcac aacgcgagcgcctccgtcttcctagccgagtccggccagcccgaaatccccctggaccgggagttcctcgcccaggagct gcacgtggtggaagaccccagcagcagatccgtgccgcttttgtatggaattctcactcagctgttacaaggcaatgaag agaagccccccacacacatgttccccagagccccctcattggcaccttcaaagtggactaccagcaagccatctaattaa agcagccaaatgggtacagcacccacaaactgacagacataaactgttgcagactcggaacatggtgtcaggcttttgaa gatacatggggttcacaaggcattcataaataaaataaccacattttttatgagtagcagctgtttacatttattattgt ggtaatctgcttggtccaataaaatggttgattcagaagggcaacaatcatttatacattcagtgtttctttcagatcac cccacagaaggtctgtgtaataggtaaaagttgagtcgatggcacttaagtaatctgggcattgaatagcacaataaaat aaccaaatgcacactaaacc |
|
| Transcript ID | habu1_s2789_g09980.t2 |
| Definition | - |
>habu1_s2789_g09980.t2 gctgcgccccgcccctcccgctgcccgaggagcccccggccgcggtcgccatatgggcagcgtcgcgcgtgtgcacgaag agtccgggcagcgccgccagagggcgcccttcagcgagcctgcgcgctctgactcagcattccccccctctgccgccgcc gctgagtcagcccgcgctgcgattggccgggtgcgggccaatgggggcgaagggcgggcttcggtagctccgggcatcgc cgtcccggtctctcgcgggcttccggccccgcccctctcaagatggcgaccgtcgccgagctgaaagcggccctgaagga ggcgctggcgcggcgcggcgcgctggggcaggtgcgggcccacgttcgggccgaggtcttcgccgcgctggacgatccgg gcgagccgcgccccgcagccccccgcgagaccctcctgctgaacgagctcatccgcgagtacctgcagttccaccggcac aacgcgagcgcctccgtcttcctagccgagtccggccagcccgaaatccccctggaccgggagttcctcgcccaggagct gcacgtggtggaagaccccagcagcagatccgtgccgcttttgtatggaattctcactcagctgttacaaggcaatgaag agaagccccccacacacatgttccccagagccccctcattggcaccttcaaagtggactaccagcaagccatctaattaa agcagccaaatggaaactgttgcagactcggaacatggtgtcaggcttttgaagatacatggggttcacaaggcattcat aaataaaataaccacattttttatgagtagcagctgtttacatttattattgtggtaatctgcttggtccaataaaatgg ttgattcagaagggcaacaatcatttatacattcagtgtttctttcagatcaccccacagaaggtctgtgtaataggtaa aagttgagtcgatggcacttaagtaatctgggcattgaatagcacaataaaataaccaaatgcacactaaacc |
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Protein
| Protein ID | habu1_s2789_g09980.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g09980.t1 MATVAELKAALKEALARRGALGQVRAHVRAEVFAALDDPGEPRPAAPRETLLLNELIREYLQFHRHNASASVFLAESGQP EIPLDREFLAQELHVVEDPSSRSVPLLYGILTQLLQGNEEKPPTHMFPRAPSLAPSKWTTSKPSN |
|
| Protein ID | habu1_s2789_g09980.t2 |
| Definition | - |
>habu1_s2789_g09980.t2 MATVAELKAALKEALARRGALGQVRAHVRAEVFAALDDPGEPRPAAPRETLLLNELIREYLQFHRHNASASVFLAESGQP EIPLDREFLAQELHVVEDPSSRSVPLLYGILTQLLQGNEEKPPTHMFPRAPSLAPSKWTTSKPSN |
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