Gene
| Gene Model ID | habu1_s2789_g09982 |
|---|---|
| Locus | habu1_scaffold2789 : 657239 ... 659702 : + |
| To GenomeBrowser | habu1_scaffold2789:657239..659702 |
| Genes list of scaffold | habu1_scaffold2789 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| multidrug resistance-associated protein 1- partial | GO:0005524 GO:0005887 GO:0006691 GO:0009235 GO:0019369 GO:0042493 GO:0042626 GO:0055085 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2789_g09982.t1 | 1 | 1 | ABC_tran | 5 | 121 | 8.3e-17 | 61.7 | 5.2e-20 | 9.7e-17 | 61.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2789_g09982.t1 | gi|602675337|ref|XP_007443149.1| | PREDICTED: multidrug resistance-associated protein 1-like, partial [Python bivittatus] | 0.0 |
| habu1_s2789_g09982.t1 | gi|698408418|ref|XP_009810634.1| | PREDICTED: multidrug resistance-associated protein 1-like, partial [Gavia stellata] | 0.0 |
| habu1_s2789_g09982.t1 | gi|12804459|gb|AAH01636.1| | Unknown (protein for IMAGE:3355848), partial [Homo sapiens] | 0.0 |
| habu1_s2789_g09982.t1 | gi|1871200|gb|AAC15784.1| | Multiple drug resistance gene MRP1 (5' partial) [Homo sapiens] | 0.0 |
| habu1_s2789_g09982.t1 | gi|704568219|ref|XP_010184612.1| | PREDICTED: multidrug resistance-associated protein 1, partial [Mesitornis unicolor] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 6.4 |
| Venom grand-1 | 3.5 |
| Pit, infrared sensing | 4.9 |
| Nose | 7.5 |
| Brain-1 | 1.9 |
| Eye | 4.4 |
| fetal fibroblast | 4.9 |
| venom gland-2 | 6.1 |
| Brain-2 | 1.8 |
| Spleen | 6.9 |
| Lung | 9.9 |
| Liver | 0.4 |
| Kidney | 0.9 |
| Pancreas | 23.4 |
| Small intestine | 0.7 |
| Large intestine | 2.4 |
| Stomach | 3.5 |
| heart | 2.6 |
| ovary | 1.7 |
| cheek muscle | 4.2 |
Transcript
| Transcript ID | habu1_s2789_g09982.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g09982.t1 catcccaagtcttcccggcacacagcttgcagagcagcagcgccctctggtgaccaagagaggcagcactgtctgccttg gtccatttgctgggaatcacctgccatttcatttgcatcctccagaaaaatatccagtgggtggtgagaggccgagtgtt gggcagggggactgggcccgtggtttgagccagtgggtggtcttgggaaagcccccagaccgcagaatggctggggcgca tgagagcctgattcctccctctttcaggccgagtggacctctgagcgagctgctgcccggcccggctggcctcaggaggg gcgggtggagttccggggctacagccttcgctaccggagtgacatggaccctgtgctgcgggacgtctccatcgtggtac atgctggggagaaagtgggcatcgtcggaaggaccggggccgggaagtcctccctggtgctcggcttgtttcggatcaaa gaggcagcagaaggagagatcctcattgacggggttaacattgccaaaatcggactgcacgaccttcgcttcaagatcac catcatcccccaggatcccatcctgttctctggctccctgcgcatgaatcttgacccttttgaccagtattccgatgacg aggtctggatgtcgttggagcttgctcacctgaaagccttcgtctcctcccttcctgataagctcctccacgagtgttca gaaggtggagaaaacctcaggtatacagagcaacaaggcttcaaggcccccagagcttttaccacgcacagggacgcgcg tgtgtgttaggcacgtgtttaagagcatggtgctgagctctgcgaagtttgtttgcctctaaactctggctctgccagcc gttcgttaaactggcagtgccaagaaaggatctgctcgcgttgctcgttttggctggtctctggctgtgtgcccagccct ccacccaggactgattcacaggctgaagaatcaggtgagattctggctgttaggaagaagcaggtagccttgcctgttcg tgagaagtttagccttccgaagcagccttgtcttaacacagcgccaggaggaaaacagtgcctggtgtttacctggttaa gtctctttcctggggggagggaaggtgcgcagtcctccacccacttgagtttcaactcaaggacaggctgactcagagtc attagagatagttgtgttctcttcaccaaattgatataagataacctttatatattgtaccaatttaatacttctggtag gataacagagaatgctttacttttttcttaagatatttagttctcttttttgtttgatgctccttttttccagtggatct tttcctgtttttttctggtcccgttcttaagtttaattgcaaagcgggggacagagagaagtggagttgcccatttctgg ctgcagcctctttgcaaaaggaggatgcagtggatgtcttaagtattcaaggaaattgatttctgacatgagctgtaatc tggggcaatttttgctactgcccggaaaatgccaacttgagctgtgccttgcagctgaaatgatctgagtgcagcagaca aacatccccacccttttaggagcagctgtgaaaagtgacttttgagataaacagaagccattttctgaacaca |
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Protein
| Protein ID | habu1_s2789_g09982.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g09982.t1 MDPVLRDVSIVVHAGEKVGIVGRTGAGKSSLVLGLFRIKEAAEGEILIDGVNIAKIGLHDLRFKITIIPQDPILFSGSLR MNLDPFDQYSDDEVWMSLELAHLKAFVSSLPDKLLHECSEGGENLRYTEQQGFKAPRAFTTHRDARVC |
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