Gene
| Gene Model ID | habu1_s2789_g09984 |
|---|---|
| Locus | habu1_scaffold2789 : 671849 ... 674197 : + |
| To GenomeBrowser | habu1_scaffold2789:671849..674197 |
| Genes list of scaffold | habu1_scaffold2789 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2789_g09984.t1 | 1 | 1 | SNN_transmemb | 3 | 32 | 4.1e-22 | 77.5 | 2.2e-25 | 5.4e-22 | 77.1 |
| habu1_s2789_g09984.t1 | 1 | 1 | SNN_linker | 33 | 58 | 4.6e-21 | 74.0 | 2.5e-24 | 6.2e-21 | 73.6 |
| habu1_s2789_g09984.t1 | 1 | 1 | SNN_cytoplasm | 60 | 85 | 7.7e-12 | 44.7 | 4.1e-15 | 1.0e-11 | 44.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2789_g09984.t1 | gi|696979325|ref|XP_009558624.1| | PREDICTED: stannin [Cuculus canorus] | 0.0 |
| habu1_s2789_g09984.t1 | gi|744564377|ref|XP_010978340.1| | PREDICTED: stannin [Camelus dromedarius] | 0.0 |
| habu1_s2789_g09984.t1 | gi|560929781|ref|XP_006191038.1| | PREDICTED: stannin [Camelus ferus] | 0.0 |
| habu1_s2789_g09984.t1 | gi|545183440|ref|XP_005598969.1| | PREDICTED: stannin [Equus caballus] | 0.0 |
| habu1_s2789_g09984.t1 | gi|699654415|ref|XP_009897133.1| | PREDICTED: stannin [Picoides pubescens] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.1 |
| Venom grand-1 | 3.8 |
| Pit, infrared sensing | 5.4 |
| Nose | 4.0 |
| Brain-1 | 6.8 |
| Eye | 4.6 |
| fetal fibroblast | 4.0 |
| venom gland-2 | 6.4 |
| Brain-2 | 8.9 |
| Spleen | 5.0 |
| Lung | 6.9 |
| Liver | 6.6 |
| Kidney | 1.9 |
| Pancreas | 4.7 |
| Small intestine | 2.9 |
| Large intestine | 4.5 |
| Stomach | 3.3 |
| heart | 6.9 |
| ovary | 44.7 |
| cheek muscle | 8.6 |
Transcript
| Transcript ID | habu1_s2789_g09984.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g09984.t1 gggccaggaggaggagagcggcggacggcggctccagctcgacgcctccccgggcggaagcgcgccctccctggcgctga gcccccccttcctctggcaagggagcagctgccagccaggagggccgaggcgcctttgcagccgctcgccatgtccatgg accacagccccaccacgggggtggtgacagtcatcgtcatcctcatcgccatcgcagccctgggcgccctgattctgggc tgctggtgctacctgcgcctccagcggatcagccagtcggaggacgaggagagcatcgtgggcgaaggcgaaaccaagga gcccttcctcctggtccagtattctgcgcggggaccttgcacagagagtaaggccaagctgagtcccggtggccccaagg cgcacggctagcgggatttccacaggctgcaaatcccacggtcagaaggctgctgggaggccgggattggagtgtgtgca gcagtagggtagaaaggcctttgtgtaactagcccctcccttgcctgtggatgcactgagttccactctctgttgggggg gggagcttagcacttgttcccagtgagtgtatttttgtagctaaacccatcctcttcaagggggttctgggaatacccag ccatgcacccaggggggagcacttccctcctcccagcatcttcaacctttcgctcatttccacttgtgcttttatggcca aagggagaccctgctgcttcacagaacaaggacccccttcttttctctttggcctaagcaacgcaatgcaaggggaagaa acttagaatcccccacttcagcccctctgaccggctgccgaaatgcagtaaataaaaaagttggagagacccctgggg |
|
Protein
| Protein ID | habu1_s2789_g09984.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g09984.t1 MSMDHSPTTGVVTVIVILIAIAALGALILGCWCYLRLQRISQSEDEESIVGEGETKEPFLLVQYSARGPCTESKAKLSPG GPKAHG |
|