Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s2789_g09985
Locus habu1_scaffold2789 : 674611 ... 677098 : -
To GenomeBrowser habu1_scaffold2789:674611..677098
Genes list of scaffold habu1_scaffold2789

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s2789_g09985.t1 gi|602670724|ref|XP_007440884.1| PREDICTED: thioredoxin domain-containing protein 11 [Python bivittatus] 0.0
habu1_s2789_g09985.t1 gi|704534953|ref|XP_010190398.1| PREDICTED: thioredoxin domain-containing protein 11-like, partial [Mesitornis unicolor] 1.4013e-45
habu1_s2789_g09985.t1 gi|694656018|ref|XP_009483968.1| PREDICTED: thioredoxin domain-containing protein 11 [Pelecanus crispus] 2.8026e-45
habu1_s2789_g09985.t1 gi|675612698|ref|XP_008935095.1| PREDICTED: thioredoxin domain-containing protein 11-like, partial [Merops nubicus] 4.2039e-45
habu1_s2789_g09985.t1 gi|704284696|ref|XP_010157398.1| PREDICTED: thioredoxin domain-containing protein 11-like, partial [Eurypyga helias] 7.00649e-43

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 16.1
Venom grand-1 41.8
Pit, infrared sensing 18.6
Nose 18.9
Brain-1 7.8
Eye 14.7
fetal fibroblast 21.2
venom gland-2 75.7
Brain-2 8.1
Spleen 27.5
Lung 20.1
Liver 22.8
Kidney 8.8
Pancreas 44.7
Small intestine 20.5
Large intestine 17.5
Stomach 16.8
heart 9.6
ovary 20.2
cheek muscle 15.3

Transcript
Transcript IDhabu1_s2789_g09985.t1
Definition-
>habu1_s2789_g09985.t1
aagcctgcatacttctctgttttaataggattgacgtttctcagaacgatctcccctgggaattcatgacggaccaccta
cccaacatcctgttttttcctcatgatcggaaggaccagacttccaagtttcccacggcttccctgattagtgtgcccaa
cctcctgaaattcatcctccgccactccagccctaccttcctggctgctggttgggggcccggactctggcaagagaccg
acctccagcaggcacgcatcacccatctggaaaaggagatcgagctgctaaaggcagagatccgggccctccaccaggcc
caggggcagctgcaggggcagctgtccgaaacccggagcgagagccagcggctgcagcgagaaactcacgccctgaagca
gcagcagagccaccgggagcagctgcaggggctgtgcagccagaggacctggcagctggaagacctggccgagaagctgc
ggaagctggccgaggcctcagagaccctcctgactgagaacgccttcctgaaagtcctgctcaccattgcagagaagcat
cgggcagcagaattgggcccggaacacagcttcccccccgaggacgccgcaagcctcccaccccccgggcaggaccactt
tccccaggtggaaaaggagggggctggcccgttggactccagggtccctgcagagcacagcaaggagaattggacagagt
agctctgctgagcctggaataacaagcaagtcaaacaagcagagagacctttatgcaaactttattgaagtgtcattaga
aagcctcccttcttttgctggactagaaaaaagagtatttttttaatgagtcctggacccagagtgacaggtcttgggat
ctgtgaaattgtcaaattgcagggattgttctttgcactttaaaattgcactaatttgttagcttttgtatcaatttaac
ctaaattaaacaatttggagggtggccacatg

Protein
Protein IDhabu1_s2789_g09985.t1
Definition-
>habu1_s2789_g09985.t1
MTDHLPNILFFPHDRKDQTSKFPTASLISVPNLLKFILRHSSPTFLAAGWGPGLWQETDLQQARITHLEKEIELLKAEIR
ALHQAQGQLQGQLSETRSESQRLQRETHALKQQQSHREQLQGLCSQRTWQLEDLAEKLRKLAEASETLLTENAFLKVLLT
IAEKHRAAELGPEHSFPPEDAASLPPPGQDHFPQVEKEGAGPLDSRVPAEHSKENWTE

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