Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s2789_g10002
Locus habu1_scaffold2789 : 793313 ... 800868 : -
To GenomeBrowser habu1_scaffold2789:793313..800868
Genes list of scaffold habu1_scaffold2789

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 4.0
Venom grand-1 2.9
Pit, infrared sensing 2.8
Nose 8.3
Brain-1 1.3
Eye 2.5
fetal fibroblast 0.4
venom gland-2 2.9
Brain-2 1.6
Spleen 1.8
Lung 3.9
Liver 0.7
Kidney 1.4
Pancreas 1.3
Small intestine 2.4
Large intestine 4.6
Stomach 1.3
heart 1.0
ovary 0.5
cheek muscle 0.9

Transcript
Transcript IDhabu1_s2789_g10002.t1
Definition-
>habu1_s2789_g10002.t1
aagagacgctctgggaccgggctgggaggccgagggttccccgccgccgcagccgggccccggggagtgggcgccctgcg
tggccggcgtgggggtggtgccagggccagccttgctccggggaccctggcctcggctcccggctcgcccgcctcccccc
cccgccgcgttccgggtctcctagcaaccgggagaaactttcccgcgagcagaacgccgccgcccgccgctgatgccgcg
agtctgcccagggcagcgggaccatgagccacaacctctccttcgtggagctgatcaacctggccatcgggacgccggag
ctgggcaatgtcaacttcaacgcgctgcacctgttcctgcacagcctggtggagcacctgcacctgcaggacgtgaggaa
ggaagtgtcggccgacgagctggagttcatcaagccgcccgccagctccgcagcctccgcagccacctcggccaccgagg
ccctccccgcggcgcagaagtccagttccatcttccaccagatgcacgagaggatcaccgccatcgagaagcagctccag
ttcctgaatgagagccctgacacggcagagctgctggtccgcagccagggcctgggccagcctgccctggacatgtggca
gatgatgcagctgaagaagaagatggagctgaacgaggagggcatgaccaaggccatgaatatgctgcaggacctgctga
atagcatttgctctctgaaaatggccacggagggctttcagcaagaactggggcagctgaaagaagacattgcccagatc
aatggagaagaaatgaaagagcggctgctgtgcctggacaaacaggccaggatgatggaagaaatgaaggagcaactggg
cctcgtgaaagaaagggtcagcctatctgcaagtgcttcggatgtggtgtgctggagtgccctttgcgagacgctcaccg
gcaaaacctttgaggaagagaaaggggtccgagaggaagaggaaagggtccgagaggaagaggaaaggggccgagaggaa
gaggaaaggggccgagaggaaaaggaaagaggccgagaggaagaggaaaggggccgagaggaaaaggaaaggggccgaga
ggaaaaggcaagggtccgagaacagacatcccgggagatcctggctgttctgagccaactgcctgagaagcatgaagctc
tcctgaaccacatcactcagctggaggcccaattgaagtacccagcaggacctgcagcttttgaaatgtcccccgagctg
aagttgctgctggaacggatggagatattgcaaactcagagccagcagggaaaggaatctctgcaagagaccctggagca
gatggagaagctgagggaacagtatgaaaaactgcagcagggggtggagaagttagccaggagcagcacggagatgcaga
tcatacgcaacatgttgcatcagttggatgtcaagaaagctgataaggactcaatccaagaggagatgaatgtgaaagct
gacaagagtgcgctggaggcaatggtgaaccatgggcagctgcaggtggccaccagccaactcagcgagatgatgcagga
tctgttgcaaaagatgtctctgcaggacaaggattggcagaaggcgctcgagaagctcttcgtggacatggactgcaagc
tggaccgcttggccctggatcccgtgagccggcagctggaggaggtgtggaagttcatcaagaagtacctgagtgagggg
cctcgctttgatgctgacagcgcggctggcttcaaaaagcagctctttgagagagtgaaatgcatctcctgcgaccggcc
agtgaccatgatgactgggccgcacatgatcactgtccggaaagccacgctgaagcctcgtccagtcagtgccagtggct
acgaatacctgttccaccagcagaaaaggtcaactgaggtagacattctgggagtgaacggggtcctctacaaaggccga
gtgagctcacatgcggcagagcggacatttgccctgcagaaggaatttgcagctctgaagattccccggcctccgacggg
ggtgcgaatggagagagttcgctctgcctttgcagacatcagtgcagtgccctacccctcctccgtcctccgtcgagtgg
ggtctgcaatagccaacagcaatcagcgaccgcaggagcttagctgtgaccctgtggacagaacagctattggcgcaacc
ctcggcgaaagccatgttcagaatgaacgggaggttccaggcctgtaagctcaactctccatgagccccatctcatgtcc
tctctcttcttaaatacctgccagatgggacagaaagtggtagaggcagaggtgtcttgtggggctcccttccctctcag
ctgggctatctgggctaggcccttcagccaacctccattatgttgtcttcctaggggcagccgtagcttttagcattccc
tgaagattttggtcatccctgtcagactgctgatactgtaacggaagaggctgcttcccacccatctgaaacagaagcca
cagacttgcctggctttccaaggggagcggctgtgtccacaactaccatcatgcccgactcatgtcagatgtgcagcaga
tcatgggctaagattggtgcttctctccgtggtgaaccaggattcccgaacaaaacattcattatgatgacagtgaacac
aagtattccaggggccaagatctgccagagattccagtttggaccctggcatcttcagaaacctgaccaatgtgcttctc
cttccctctccatatgggatttcggagatattcctgatactgtctctgtctcagccatggcacaggaaagcattcatcta
gtgagaaaatgattctataaatattctttttctacatgctgtg
Transcript IDhabu1_s2789_g10002.t2
Definition-
>habu1_s2789_g10002.t2
aagagacgctctgggaccgggctgggaggccgagggttccccgccgccgcagccgggccccggggagtgggcgccctgcg
tggccggcgtgggggtggtgccagggccagccttgctccggggaccctggcctcggctcccggctcgcccgcctcccccc
cccgccgcgttccgggtctcctagcaaccgggagaaactttcccgcgagcagaacgccgccgcccgccgctgatgccgcg
agtctgcccagggcagcgggaccatgagccacaacctctccttcgtggagctgatcaacctggccatcgggacgccggag
ctgggcaatgtcaacttcaacgcgctgcacctgttcctgcacagcctggtggagcacctgcacctgcaggacgtgaggaa
ggaagtgtcggccgacgagctggagttcatcaagccgcccgccagctccgcagcctccgcagccacctcggccaccgagg
ccctccccgcggcgcagaagtccagttccatcttccaccagatgcacgagaggatcaccgccatcgagaagcagctccag
ttcctgaatgagagccctgacacggcagagctgctggtccgcagccagggcctgggccagcctgccctggacatgtggca
gatgatgcagctgaagaagaagatggagctgaacgaggagggcatgaccaaggccatgaatatgctgcaggacctgctga
atagcatttgctctctgaaaatggccacggagggctttcagcaagaactggggcagctgaaagaagacattgcccagatc
aatggagaagaaatgaaagagcggctgctgtgcctggacaaacaggccaggatgatggaagaaatgaaggagcaactgag
ggagcggggcaaggccttcagatgggcagacagagcatcagggagtgcggaaatggggggcctcgtgaaagaaagggtca
gcctatctgcaagtgcttcggatgtggtgtgctggagtgccctttgcgagacgctcaccggcaaaacctttgaggaagag
aaaggggtccgagaggaagaggaaagggtccgagaggaagaggaaaggggccgagaggaagaggaaaggggccgagagga
aaaggaaagaggccgagaggaagaggaaaggggccgagaggaaaaggaaaggggccgagaggaaaaggcaagggtccgag
aacagacatcccgggagatcctggctgttctgagccaactgcctgagaagcatgaagctctcctgaaccacatcactcag
ctggaggcccaattgaagtacccagcaggacctgcagcttttgaaatgtcccccgagctgaagttgctgctggaacggat
ggagatattgcaaactcagagccagcagggaaaggaatctctgcaagagaccctggagcagatggagaagctgagggaac
agtatgaaaaactgcagcagggggtggagaagttagccaggagcagcacggagatgcagatcatacgcaacatgttgcat
cagttggatgtcaagaaagctgataaggactcaatccaagaggagatgaatgtgaaagctgacaagagtgcgctggaggc
aatggtgaaccatgggcagctgcaggtggccaccagccaactcagcgagatgatgcaggatctgttgcaaaagatgtctc
tgcaggacaaggattggcagaaggcgctcgagaagctcttcgtggacatggactgcaagctggaccgcttggccctggat
cccgtgagccggcagctggaggaggtgtggaagttcatcaagaagtacctgagtgaggggcctcgctttgatgctgacag
cgcggctggcttcaaaaagcagctctttgagagagtgaaatgcatctcctgcgaccggccagtgaccatgatgactgggc
cgcacatgatcactgtccggaaagccacgctgaagcctcgtccagtcagtgccagtggctacgaatacctgttccaccag
cagaaaaggtcaactgaggtagacattctgggagtgaacggggtcctctacaaaggccgagtgagctcacatgcggcaga
gcggacatttgccctgcagaaggaatttgcagctctgaagattccccggcctccgacgggggtgcgaatggagagagttc
gctctgcctttgcagacatcagtgcagtgccctacccctcctccgtcctccgtcgagtggggtctgcaatagccaacagc
aatcagcgaccgcaggagcttagctgtgaccctgtggacagaacagctattggcgcaaccctcggcgaaagccatgttca
gaatgaacgggaggttccaggcctgtaagctcaactctccatgagccccatctcatgtcctctctcttcttaaatacctg
ccagatgggacagaaagtggtagaggcagaggtgtcttgtggggctcccttccctctcagctgggctatctgggctaggc
ccttcagccaacctccattatgttgtcttcctaggggcagccgtagcttttagcattccctgaagattttggtcatccct
gtcagactgctgatactgtaacggaagaggctgcttcccacccatctgaaacagaagccacagacttgcctggctttcca
aggggagcggctgtgtccacaactaccatcatgcccgactcatgtcagatgtgcagcagatcatgggctaagattggtgc
ttctctccgtggtgaaccaggattcccgaacaaaacattcattatgatgacagtgaacacaagtattccaggggccaaga
tctgccagagattccagtttggaccctggcatcttcagaaacctgaccaatgtgcttctccttccctctccatatgggat
ttcggagatattcctgatactgtctctgtctcagccatggcacaggaaagcattcatctagtgagaaaatgattctataa
atattctttttctacatgctgtg

Protein
Protein IDhabu1_s2789_g10002.t1
Definition-
>habu1_s2789_g10002.t1
MSHNLSFVELINLAIGTPELGNVNFNALHLFLHSLVEHLHLQDVRKEVSADELEFIKPPASSAASAATSATEALPAAQKS
SSIFHQMHERITAIEKQLQFLNESPDTAELLVRSQGLGQPALDMWQMMQLKKKMELNEEGMTKAMNMLQDLLNSICSLKM
ATEGFQQELGQLKEDIAQINGEEMKERLLCLDKQARMMEEMKEQLGLVKERVSLSASASDVVCWSALCETLTGKTFEEEK
GVREEEERVREEEERGREEEERGREEKERGREEEERGREEKERGREEKARVREQTSREILAVLSQLPEKHEALLNHITQL
EAQLKYPAGPAAFEMSPELKLLLERMEILQTQSQQGKESLQETLEQMEKLREQYEKLQQGVEKLARSSTEMQIIRNMLHQ
LDVKKADKDSIQEEMNVKADKSALEAMVNHGQLQVATSQLSEMMQDLLQKMSLQDKDWQKALEKLFVDMDCKLDRLALDP
VSRQLEEVWKFIKKYLSEGPRFDADSAAGFKKQLFERVKCISCDRPVTMMTGPHMITVRKATLKPRPVSASGYEYLFHQQ
KRSTEVDILGVNGVLYKGRVSSHAAERTFALQKEFAALKIPRPPTGVRMERVRSAFADISAVPYPSSVLRRVGSAIANSN
QRPQELSCDPVDRTAIGATLGESHVQNEREVPGL
Protein IDhabu1_s2789_g10002.t2
Definition-
>habu1_s2789_g10002.t2
MSHNLSFVELINLAIGTPELGNVNFNALHLFLHSLVEHLHLQDVRKEVSADELEFIKPPASSAASAATSATEALPAAQKS
SSIFHQMHERITAIEKQLQFLNESPDTAELLVRSQGLGQPALDMWQMMQLKKKMELNEEGMTKAMNMLQDLLNSICSLKM
ATEGFQQELGQLKEDIAQINGEEMKERLLCLDKQARMMEEMKEQLRERGKAFRWADRASGSAEMGGLVKERVSLSASASD
VVCWSALCETLTGKTFEEEKGVREEEERVREEEERGREEEERGREEKERGREEEERGREEKERGREEKARVREQTSREIL
AVLSQLPEKHEALLNHITQLEAQLKYPAGPAAFEMSPELKLLLERMEILQTQSQQGKESLQETLEQMEKLREQYEKLQQG
VEKLARSSTEMQIIRNMLHQLDVKKADKDSIQEEMNVKADKSALEAMVNHGQLQVATSQLSEMMQDLLQKMSLQDKDWQK
ALEKLFVDMDCKLDRLALDPVSRQLEEVWKFIKKYLSEGPRFDADSAAGFKKQLFERVKCISCDRPVTMMTGPHMITVRK
ATLKPRPVSASGYEYLFHQQKRSTEVDILGVNGVLYKGRVSSHAAERTFALQKEFAALKIPRPPTGVRMERVRSAFADIS
AVPYPSSVLRRVGSAIANSNQRPQELSCDPVDRTAIGATLGESHVQNEREVPGL

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Chromosome
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495